RNA–Protein interactions for RNA: ENST00000409047.2

TUBA3D-202, Transcript of tubulin alpha 3d, humanhuman

TSL 2

Gene TUBA3D, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-202ENST00000409047 ATG3Q9NT62 314 aa18.26■□□□□ 0.51
TUBA3D-202ENST00000409047 SPG7Q9UQ90 795 aa18.26■□□□□ 0.51
TUBA3D-202ENST00000409047 BRCA1P38398 1863 aaKnown RBP18.26■□□□□ 0.51
TUBA3D-202ENST00000409047 COL5A3P25940 1745 aaPredicted RBP18.26■□□□□ 0.51
TUBA3D-202ENST00000409047 GNPATO15228 680 aa18.25■□□□□ 0.51
TUBA3D-202ENST00000409047 TMOD3Q9NYL9 352 aa18.25■□□□□ 0.51
TUBA3D-202ENST00000409047 POLKQ9UBT6 870 aa18.25■□□□□ 0.51
TUBA3D-202ENST00000409047 MYH14Q7Z406 1995 aaKnown RBP18.24■□□□□ 0.51
TUBA3D-202ENST00000409047 PPM1GO15355 546 aaPredicted RBP18.24■□□□□ 0.51
TUBA3D-202ENST00000409047 CDCA8Q53HL2 280 aa18.24■□□□□ 0.51
TUBA3D-202ENST00000409047 MMP10P09238 476 aa18.23■□□□□ 0.51
TUBA3D-202ENST00000409047 ATP6V1AP38606 617 aa18.23■□□□□ 0.51
TUBA3D-202ENST00000409047 IFNL2Q8IZJ0 200 aa18.22■□□□□ 0.51
TUBA3D-202ENST00000409047 C10orf71Q711Q0 1435 aa18.22■□□□□ 0.51
TUBA3D-202ENST00000409047 C4AP0C0L4 1744 aa18.21■□□□□ 0.51
TUBA3D-202ENST00000409047 EIF4A2Q14240 407 aaKnown RBP18.21■□□□□ 0.51
TUBA3D-202ENST00000409047 PLEKHG2Q9H7P9 1386 aa18.2■□□□□ 0.5
TUBA3D-202ENST00000409047 KDM6AO15550 1401 aaPredicted RBP18.19■□□□□ 0.5
TUBA3D-202ENST00000409047 A0A0G2JLW4 131 aa18.17■□□□□ 0.5
TUBA3D-202ENST00000409047 TGFB2P61812 414 aa18.17■□□□□ 0.5
TUBA3D-202ENST00000409047 ARHGEF1Q92888 912 aaKnown RBP18.17■□□□□ 0.5
TUBA3D-202ENST00000409047 ARFGEF1Q9Y6D6 1849 aa18.16■□□□□ 0.5
TUBA3D-202ENST00000409047 GYS1P13807 737 aa18.16■□□□□ 0.5
TUBA3D-202ENST00000409047 KCNA3P22001 575 aa18.16■□□□□ 0.5
TUBA3D-202ENST00000409047 TRAPPC3LQ5T215 181 aa18.16■□□□□ 0.5
TUBA3D-202ENST00000409047 RC3H1Q5TC82 1133 aaKnown RBP18.16■□□□□ 0.5
TUBA3D-202ENST00000409047 RTCBQ9Y3I0 505 aaKnown RBP18.16■□□□□ 0.5
TUBA3D-202ENST00000409047 CNTNAP4Q9C0A0 1308 aa18.16■□□□□ 0.5
TUBA3D-202ENST00000409047 ERVV-2B6SEH9 535 aa18.15■□□□□ 0.5
TUBA3D-202ENST00000409047 NLGN1Q8N2Q7 840 aa18.15■□□□□ 0.5
TUBA3D-202ENST00000409047 DNAJC5GQ8N7S2 189 aa18.15■□□□□ 0.5
TUBA3D-202ENST00000409047 ADAMTS7Q9UKP4 1686 aa18.15■□□□□ 0.5
TUBA3D-202ENST00000409047 DPEP1P16444 411 aa18.14■□□□□ 0.49
TUBA3D-202ENST00000409047 ADRA2BP18089 450 aa18.14■□□□□ 0.49
TUBA3D-202ENST00000409047 BCS1LQ9Y276 419 aa18.14■□□□□ 0.49
TUBA3D-202ENST00000409047 TJP1Q07157 1748 aa18.13■□□□□ 0.49
TUBA3D-202ENST00000409047 RPS6KA4O75676 772 aa18.13■□□□□ 0.49
TUBA3D-202ENST00000409047 PCNTO95613 3336 aa18.12■□□□□ 0.49
TUBA3D-202ENST00000409047 TNNT2P45379 298 aaPredicted RBP18.12■□□□□ 0.49
TUBA3D-202ENST00000409047 DCAF5Q96JK2 942 aa18.12■□□□□ 0.49
TUBA3D-202ENST00000409047 RBM42Q9BTD8 480 aaKnown RBP18.12■□□□□ 0.49
TUBA3D-202ENST00000409047 NMRK2Q9NPI5 230 aa18.12■□□□□ 0.49
TUBA3D-202ENST00000409047 TOMM70O94826 608 aa18.11■□□□□ 0.49
TUBA3D-202ENST00000409047 SBF1O95248 1867 aa18.1■□□□□ 0.49
TUBA3D-202ENST00000409047 APLP1P51693 650 aa18.1■□□□□ 0.49
TUBA3D-202ENST00000409047 ARHGAP27Q6ZUM4 889 aa18.1■□□□□ 0.49
TUBA3D-202ENST00000409047 CCDC87Q9NVE4 849 aa18.1■□□□□ 0.49
TUBA3D-202ENST00000409047 WDR90Q96KV7 1748 aa18.09■□□□□ 0.49
TUBA3D-202ENST00000409047 AEBP1Q8IUX7 1158 aa18.09■□□□□ 0.49
TUBA3D-202ENST00000409047 FCHSD2O94868 740 aa18.08■□□□□ 0.48
TUBA3D-202ENST00000409047 HSP90AB1P08238 724 aaKnown RBP18.08■□□□□ 0.48
TUBA3D-202ENST00000409047 RFC4P35249 363 aa18.08■□□□□ 0.48
TUBA3D-202ENST00000409047 DDR1Q08345 913 aa18.08■□□□□ 0.48
TUBA3D-202ENST00000409047 ZNF530Q6P9A1 599 aaPredicted RBP18.08■□□□□ 0.48
TUBA3D-202ENST00000409047 SRP68Q9UHB9 627 aaKnown RBP18.08■□□□□ 0.48
TUBA3D-202ENST00000409047 SCN11AQ9UI33 1791 aa18.08■□□□□ 0.48
TUBA3D-202ENST00000409047 CRKLP46109 303 aaKnown RBP18.07■□□□□ 0.48
TUBA3D-202ENST00000409047 FKBP8Q14318 412 aa18.07■□□□□ 0.48
TUBA3D-202ENST00000409047 PLEKHO1Q53GL0 409 aaPredicted RBP18.07■□□□□ 0.48
TUBA3D-202ENST00000409047 PARP3Q9Y6F1 533 aa18.07■□□□□ 0.48
TUBA3D-202ENST00000409047 USP42Q9H9J4 1324 aaKnown RBP18.06■□□□□ 0.48
TUBA3D-202ENST00000409047 CABP4P57796 275 aa18.06■□□□□ 0.48
TUBA3D-202ENST00000409047 C9orf131Q5VYM1 1079 aa18.06■□□□□ 0.48
TUBA3D-202ENST00000409047 PTCD1O75127 700 aaKnown RBP18.05■□□□□ 0.48
TUBA3D-202ENST00000409047 AMOTQ4VCS5 1084 aa18.05■□□□□ 0.48
TUBA3D-202ENST00000409047 KCPQ6ZWJ8 1503 aa18.04■□□□□ 0.48
TUBA3D-202ENST00000409047 INTS5Q6P9B9 1019 aaKnown RBP18.04■□□□□ 0.48
TUBA3D-202ENST00000409047 NFATC2IPQ8NCF5 419 aa18.04■□□□□ 0.48
TUBA3D-202ENST00000409047 AFDNP55196 1824 aaKnown RBP18.04■□□□□ 0.48
TUBA3D-202ENST00000409047 VIRMAQ69YN4 1812 aaKnown RBP18.03■□□□□ 0.48
TUBA3D-202ENST00000409047 MTHFSP49914 203 aa18.03■□□□□ 0.48
TUBA3D-202ENST00000409047 HTRA3P83110 453 aa18.03■□□□□ 0.48
TUBA3D-202ENST00000409047 RBM46Q8TBY0 533 aaKnown RBP18.03■□□□□ 0.48
TUBA3D-202ENST00000409047 PANK3Q9H999 370 aa18.03■□□□□ 0.48
TUBA3D-202ENST00000409047 PIM2Q9P1W9 311 aa18.03■□□□□ 0.48
TUBA3D-202ENST00000409047 TIMELESSQ9UNS1 1208 aa18.03■□□□□ 0.48
TUBA3D-202ENST00000409047 POLRMTO00411 1230 aaKnown RBP18.02■□□□□ 0.48
TUBA3D-202ENST00000409047 TM4SF1P30408 202 aa18.02■□□□□ 0.48
TUBA3D-202ENST00000409047 CHRNA5P30532 468 aa18.02■□□□□ 0.48
TUBA3D-202ENST00000409047 POLR3GLQ9BT43 218 aa18.02■□□□□ 0.48
TUBA3D-202ENST00000409047 NRXN2Q9P2S2 1712 aa18.02■□□□□ 0.48
TUBA3D-202ENST00000409047 TNRC6CQ9HCJ0 1690 aaKnown RBP18■□□□□ 0.47
TUBA3D-202ENST00000409047 IL13P35225 146 aa18■□□□□ 0.47
TUBA3D-202ENST00000409047 DALRD3Q5D0E6 543 aaKnown RBP18■□□□□ 0.47
TUBA3D-202ENST00000409047 MRC1P22897 1456 aa18■□□□□ 0.47
TUBA3D-202ENST00000409047 DLEC1Q9Y238 1755 aa17.99■□□□□ 0.47
TUBA3D-202ENST00000409047 PRELPP51888 382 aa17.99■□□□□ 0.47
TUBA3D-202ENST00000409047 SULT6B1Q6IMI4 303 aa17.99■□□□□ 0.47
TUBA3D-202ENST00000409047 SOS1Q07889 1333 aaPredicted RBP17.98■□□□□ 0.47
TUBA3D-202ENST00000409047 TRIM26Q12899 539 aaPredicted RBP17.98■□□□□ 0.47
TUBA3D-202ENST00000409047 C1orf141Q5JVX7 400 aa17.98■□□□□ 0.47
TUBA3D-202ENST00000409047 DNAJC10Q8IXB1 793 aa17.98■□□□□ 0.47
TUBA3D-202ENST00000409047 JMYQ8N9B5 988 aa17.98■□□□□ 0.47
TUBA3D-202ENST00000409047 RNF181Q9P0P0 153 aa17.98■□□□□ 0.47
TUBA3D-202ENST00000409047 HSPA5P11021 654 aaKnown RBP17.97■□□□□ 0.47
TUBA3D-202ENST00000409047 FSTL1Q12841 308 aa17.97■□□□□ 0.47
TUBA3D-202ENST00000409047 KLRG1Q96E93 195 aa17.97■□□□□ 0.47
TUBA3D-202ENST00000409047 LGR6Q9HBX8 967 aa17.97■□□□□ 0.47
TUBA3D-202ENST00000409047 USPL1Q5W0Q7 1092 aa17.96■□□□□ 0.47
TUBA3D-202ENST00000409047 BCL2L12Q9HB09 334 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms