RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 EIF4A1P60842 406 aaKnown RBP30.95■■■□□ 2.55
DNMT3A-206ENST00000406659 FLIIQ13045 1269 aa30.95■■■□□ 2.55
DNMT3A-206ENST00000406659 SLC4A10Q6U841 1118 aa30.95■■■□□ 2.55
DNMT3A-206ENST00000406659 OVOS2A0A0G2JMS6 1433 aa30.95■■■□□ 2.54
DNMT3A-206ENST00000406659 CSB-PGBD3P0DP91 1061 aa30.94■■■□□ 2.54
DNMT3A-206ENST00000406659 HDGFL1Q5TGJ6 251 aa30.94■■■□□ 2.54
DNMT3A-206ENST00000406659 CHMP4AQ9BY43 222 aa30.94■■■□□ 2.54
DNMT3A-206ENST00000406659 CACNA1FO60840 1977 aa30.94■■■□□ 2.54
DNMT3A-206ENST00000406659 F6X3S4 739 aa30.94■■■□□ 2.54
DNMT3A-206ENST00000406659 ANKRD45Q5TZF3 282 aa30.94■■■□□ 2.54
DNMT3A-206ENST00000406659 LNPKQ9C0E8 428 aa30.94■■■□□ 2.54
DNMT3A-206ENST00000406659 COL18A1P39060 1754 aa30.94■■■□□ 2.54
DNMT3A-206ENST00000406659 FKBP5Q13451 457 aaPredicted RBP30.92■■■□□ 2.54
DNMT3A-206ENST00000406659 CHRNA2Q15822 529 aa30.92■■■□□ 2.54
DNMT3A-206ENST00000406659 KDM3BQ7LBC6 1761 aa30.92■■■□□ 2.54
DNMT3A-206ENST00000406659 ABCC6O95255 1503 aa30.92■■■□□ 2.54
DNMT3A-206ENST00000406659 HOXB7P09629 217 aa30.92■■■□□ 2.54
DNMT3A-206ENST00000406659 TATP17735 454 aaPredicted RBP30.92■■■□□ 2.54
DNMT3A-206ENST00000406659 RPAP2Q8IXW5 612 aaPredicted RBP30.92■■■□□ 2.54
DNMT3A-206ENST00000406659 ANKRD44Q8N8A2 993 aa30.91■■■□□ 2.54
DNMT3A-206ENST00000406659 MEIS3Q99687 375 aa30.91■■■□□ 2.54
DNMT3A-206ENST00000406659 CPDO75976 1380 aa30.9■■■□□ 2.54
DNMT3A-206ENST00000406659 CRYBG1Q9Y4K1 1723 aa30.89■■■□□ 2.54
DNMT3A-206ENST00000406659 KCNQ3O43525 872 aa30.88■■■□□ 2.53
DNMT3A-206ENST00000406659 SEC24BO95487 1268 aa30.88■■■□□ 2.53
DNMT3A-206ENST00000406659 EIF2S2P20042 333 aaKnown RBP30.87■■■□□ 2.53
DNMT3A-206ENST00000406659 SPG7Q9UQ90 795 aa30.87■■■□□ 2.53
DNMT3A-206ENST00000406659 CEP85Q6P2H3 762 aa30.87■■■□□ 2.53
DNMT3A-206ENST00000406659 SOS2Q07890 1332 aaPredicted RBP30.86■■■□□ 2.53
DNMT3A-206ENST00000406659 DCTPP1Q9H773 170 aa30.86■■■□□ 2.53
DNMT3A-206ENST00000406659 ATP10DQ9P241 1426 aa30.86■■■□□ 2.53
DNMT3A-206ENST00000406659 UPF2Q9HAU5 1272 aaKnown RBP30.84■■■□□ 2.53
DNMT3A-206ENST00000406659 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.84■■■□□ 2.53
DNMT3A-206ENST00000406659 HMMRO75330 724 aa30.8■■■□□ 2.52
DNMT3A-206ENST00000406659 GNAI3P08754 354 aa30.8■■■□□ 2.52
DNMT3A-206ENST00000406659 PHAXQ9H814 394 aaKnown RBP30.8■■■□□ 2.52
DNMT3A-206ENST00000406659 PLEKHG2Q9H7P9 1386 aa30.8■■■□□ 2.52
DNMT3A-206ENST00000406659 MEGF6O75095 1541 aa30.8■■■□□ 2.52
DNMT3A-206ENST00000406659 ADAMTS7Q9UKP4 1686 aa30.79■■■□□ 2.52
DNMT3A-206ENST00000406659 GNAI2P04899 355 aa30.79■■■□□ 2.52
DNMT3A-206ENST00000406659 PRDM11Q9NQV5 511 aa30.79■■■□□ 2.52
DNMT3A-206ENST00000406659 PHKG2P15735 406 aa30.79■■■□□ 2.52
DNMT3A-206ENST00000406659 CHPF2Q9P2E5 772 aa30.79■■■□□ 2.52
DNMT3A-206ENST00000406659 DAXXQ9UER7 740 aaPredicted RBP30.79■■■□□ 2.52
DNMT3A-206ENST00000406659 PXDNLA1KZ92 1463 aa30.78■■■□□ 2.52
DNMT3A-206ENST00000406659 IFNL2Q8IZJ0 200 aa30.78■■■□□ 2.52
DNMT3A-206ENST00000406659 SIPA1L3O60292 1781 aaPredicted RBP30.77■■■□□ 2.52
DNMT3A-206ENST00000406659 GIGYF1O75420 1035 aaPredicted RBP30.75■■■□□ 2.51
DNMT3A-206ENST00000406659 BMP2KLQ5H9B9 411 aa30.74■■■□□ 2.51
DNMT3A-206ENST00000406659 SLC52A2Q9HAB3 445 aa30.74■■■□□ 2.51
DNMT3A-206ENST00000406659 HEG1Q9ULI3 1381 aa30.74■■■□□ 2.51
DNMT3A-206ENST00000406659 DBF4Q9UBU7 674 aaPredicted RBP30.74■■■□□ 2.51
DNMT3A-206ENST00000406659 N4BP2Q86UW6 1770 aaPredicted RBP30.73■■■□□ 2.51
DNMT3A-206ENST00000406659 SCN11AQ9UI33 1791 aa30.73■■■□□ 2.51
DNMT3A-206ENST00000406659 KDM6AO15550 1401 aaPredicted RBP30.72■■■□□ 2.51
DNMT3A-206ENST00000406659 TBC1D32Q96NH3 1257 aa30.71■■■□□ 2.51
DNMT3A-206ENST00000406659 WDR17Q8IZU2 1322 aa30.7■■■□□ 2.51
DNMT3A-206ENST00000406659 HSP90AB1P08238 724 aaKnown RBP30.7■■■□□ 2.51
DNMT3A-206ENST00000406659 DCAF5Q96JK2 942 aa30.7■■■□□ 2.51
DNMT3A-206ENST00000406659 SRCIN1Q9C0H9 1055 aa30.7■■■□□ 2.51
DNMT3A-206ENST00000406659 TOM1L2Q6ZVM7 507 aa30.69■■■□□ 2.5
DNMT3A-206ENST00000406659 DNAAF4Q8WXU2 420 aa30.69■■■□□ 2.5
DNMT3A-206ENST00000406659 CYP27B1O15528 508 aa30.68■■■□□ 2.5
DNMT3A-206ENST00000406659 ANXA1P04083 346 aa30.68■■■□□ 2.5
DNMT3A-206ENST00000406659 ZNF790Q6PG37 636 aa30.68■■■□□ 2.5
DNMT3A-206ENST00000406659 NFATC2IPQ8NCF5 419 aa30.68■■■□□ 2.5
DNMT3A-206ENST00000406659 USP44Q9H0E7 712 aa30.68■■■□□ 2.5
DNMT3A-206ENST00000406659 PKD1L3Q7Z443 1732 aa30.68■■■□□ 2.5
DNMT3A-206ENST00000406659 UBTFL1P0CB47 393 aaPredicted RBP30.67■■■□□ 2.5
DNMT3A-206ENST00000406659 PI4KAP2A4QPH2 592 aa30.66■■■□□ 2.5
DNMT3A-206ENST00000406659 MFAP1P55081 439 aaKnown RBP30.66■■■□□ 2.5
DNMT3A-206ENST00000406659 PLEKHM2Q8IWE5 1019 aa30.66■■■□□ 2.5
DNMT3A-206ENST00000406659 PI4KAP1Q8N8J0 262 aa30.66■■■□□ 2.5
DNMT3A-206ENST00000406659 NHSL1Q5SYE7 1610 aa30.66■■■□□ 2.5
DNMT3A-206ENST00000406659 ATP8B2P98198 1209 aa30.66■■■□□ 2.5
DNMT3A-206ENST00000406659 SLC39A6Q13433 755 aa30.66■■■□□ 2.5
DNMT3A-206ENST00000406659 APBB1O00213 710 aa30.65■■■□□ 2.5
DNMT3A-206ENST00000406659 LRRFIP2Q9Y608 721 aaKnown RBP30.65■■■□□ 2.5
DNMT3A-206ENST00000406659 PRAMEF22A3QJZ6 481 aa30.64■■■□□ 2.5
DNMT3A-206ENST00000406659 SLC4A3P48751 1232 aa30.64■■■□□ 2.5
DNMT3A-206ENST00000406659 BCL11AQ9H165 835 aa30.64■■■□□ 2.5
DNMT3A-206ENST00000406659 HYPKQ9NX55 129 aa30.64■■■□□ 2.5
DNMT3A-206ENST00000406659 ABCA3Q99758 1704 aa30.63■■■□□ 2.49
DNMT3A-206ENST00000406659 COL5A2P05997 1499 aaPredicted RBP30.63■■■□□ 2.49
DNMT3A-206ENST00000406659 BEND3Q5T5X7 828 aa30.63■■■□□ 2.49
DNMT3A-206ENST00000406659 C16orf71Q8IYS4 520 aaPredicted RBP30.63■■■□□ 2.49
DNMT3A-206ENST00000406659 SMARCA5O60264 1052 aaPredicted RBP30.62■■■□□ 2.49
DNMT3A-206ENST00000406659 C22orf23Q9BZE7 217 aa30.61■■■□□ 2.49
DNMT3A-206ENST00000406659 PROSER3Q2NL68 480 aa30.61■■■□□ 2.49
DNMT3A-206ENST00000406659 ZCRB1Q8TBF4 217 aaKnown RBP30.61■■■□□ 2.49
DNMT3A-206ENST00000406659 ADCY9O60503 1353 aa30.61■■■□□ 2.49
DNMT3A-206ENST00000406659 CABP4P57796 275 aa30.6■■■□□ 2.49
DNMT3A-206ENST00000406659 EVA1CP58658 441 aa30.6■■■□□ 2.49
DNMT3A-206ENST00000406659 TTC5Q8N0Z6 440 aa30.6■■■□□ 2.49
DNMT3A-206ENST00000406659 CARD10Q9BWT7 1032 aa30.6■■■□□ 2.49
DNMT3A-206ENST00000406659 DDX21Q9NR30 783 aaKnown RBP eCLIP30.6■■■□□ 2.49
DNMT3A-206ENST00000406659 MRC1P22897 1456 aa30.6■■■□□ 2.49
DNMT3A-206ENST00000406659 PARP4Q9UKK3 1724 aaKnown RBP30.6■■■□□ 2.49
DNMT3A-206ENST00000406659 BECN1Q14457 450 aa30.59■■■□□ 2.49
DNMT3A-206ENST00000406659 PNMA6EA0A0J9YXQ4 647 aa30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms