RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 MCM5P33992 734 aa19.59■□□□□ 0.73
COL4A3BP-204ENST00000405807 SDSP20132 328 aa19.59■□□□□ 0.73
COL4A3BP-204ENST00000405807 JARID2Q92833 1246 aaPredicted RBP19.59■□□□□ 0.73
COL4A3BP-204ENST00000405807 AK9Q5TCS8 1911 aa19.59■□□□□ 0.73
COL4A3BP-204ENST00000405807 YEATS2Q9ULM3 1422 aa19.59■□□□□ 0.73
COL4A3BP-204ENST00000405807 SIGLEC1Q9BZZ2 1709 aa19.59■□□□□ 0.73
COL4A3BP-204ENST00000405807 PHF14O94880 888 aa19.58■□□□□ 0.73
COL4A3BP-204ENST00000405807 GPT2Q8TD30 523 aa19.58■□□□□ 0.73
COL4A3BP-204ENST00000405807 SENP3Q9H4L4 574 aaPredicted RBP19.58■□□□□ 0.73
COL4A3BP-204ENST00000405807 FBLN1P23142 703 aa19.58■□□□□ 0.72
COL4A3BP-204ENST00000405807 TULP2O00295 520 aa19.57■□□□□ 0.72
COL4A3BP-204ENST00000405807 IL13P35225 146 aa19.57■□□□□ 0.72
COL4A3BP-204ENST00000405807 LRSAM1Q6UWE0 723 aa19.57■□□□□ 0.72
COL4A3BP-204ENST00000405807 ZGPATQ8N5A5 531 aaKnown RBP19.57■□□□□ 0.72
COL4A3BP-204ENST00000405807 TSC1Q92574 1164 aa19.57■□□□□ 0.72
COL4A3BP-204ENST00000405807 KIF20BQ96Q89 1820 aa19.57■□□□□ 0.72
COL4A3BP-204ENST00000405807 ZKSCAN5Q9Y2L8 839 aa19.57■□□□□ 0.72
COL4A3BP-204ENST00000405807 ZDHHC9Q9Y397 364 aa19.57■□□□□ 0.72
COL4A3BP-204ENST00000405807 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.56■□□□□ 0.72
COL4A3BP-204ENST00000405807 RBM27Q9P2N5 1060 aaKnown RBP19.56■□□□□ 0.72
COL4A3BP-204ENST00000405807 BANK1Q8NDB2 785 aa19.55■□□□□ 0.72
COL4A3BP-204ENST00000405807 CCDC39Q9UFE4 941 aa19.55■□□□□ 0.72
COL4A3BP-204ENST00000405807 EGFL6Q8IUX8 553 aa19.55■□□□□ 0.72
COL4A3BP-204ENST00000405807 MYRIPQ8NFW9 859 aa19.55■□□□□ 0.72
COL4A3BP-204ENST00000405807 KIF3AQ9Y496 699 aa19.55■□□□□ 0.72
COL4A3BP-204ENST00000405807 ARHGEF40Q8TER5 1519 aa19.55■□□□□ 0.72
COL4A3BP-204ENST00000405807 MBD3O95983 291 aa19.54■□□□□ 0.72
COL4A3BP-204ENST00000405807 OTUD7AQ8TE49 926 aaPredicted RBP19.54■□□□□ 0.72
COL4A3BP-204ENST00000405807 ERC2O15083 957 aa19.54■□□□□ 0.72
COL4A3BP-204ENST00000405807 CEP85Q6P2H3 762 aa19.54■□□□□ 0.72
COL4A3BP-204ENST00000405807 TMEM63CQ9P1W3 806 aa19.53■□□□□ 0.72
COL4A3BP-204ENST00000405807 EMILIN1Q9Y6C2 1016 aa19.53■□□□□ 0.72
COL4A3BP-204ENST00000405807 MCCP23508 829 aa19.53■□□□□ 0.72
COL4A3BP-204ENST00000405807 TSPYL1Q9H0U9 437 aa19.53■□□□□ 0.72
COL4A3BP-204ENST00000405807 KNDC1Q76NI1 1749 aa19.53■□□□□ 0.72
COL4A3BP-204ENST00000405807 RIMS2Q9UQ26 1411 aa19.52■□□□□ 0.72
COL4A3BP-204ENST00000405807 SYCE3A1L190 88 aa19.52■□□□□ 0.72
COL4A3BP-204ENST00000405807 PLCD4Q9BRC7 762 aa19.52■□□□□ 0.72
COL4A3BP-204ENST00000405807 ATP10DQ9P241 1426 aa19.52■□□□□ 0.71
COL4A3BP-204ENST00000405807 TAOK2Q9UL54 1235 aa19.52■□□□□ 0.71
COL4A3BP-204ENST00000405807 EFCC1Q9HA90 598 aa19.51■□□□□ 0.71
COL4A3BP-204ENST00000405807 ATP7BP35670 1465 aa19.51■□□□□ 0.71
COL4A3BP-204ENST00000405807 SMARCA5O60264 1052 aaPredicted RBP19.51■□□□□ 0.71
COL4A3BP-204ENST00000405807 MCM2P49736 904 aa19.51■□□□□ 0.71
COL4A3BP-204ENST00000405807 TRHP20396 242 aaPredicted RBP19.5■□□□□ 0.71
COL4A3BP-204ENST00000405807 CPSF1Q10570 1443 aaKnown RBP19.5■□□□□ 0.71
COL4A3BP-204ENST00000405807 FAM83GA6ND36 823 aa19.5■□□□□ 0.71
COL4A3BP-204ENST00000405807 NPM1P06748 294 aaKnown RBP eCLIP19.5■□□□□ 0.71
COL4A3BP-204ENST00000405807 APBB1O00213 710 aa19.49■□□□□ 0.71
COL4A3BP-204ENST00000405807 CDK12Q9NYV4 1490 aaPredicted RBP19.49■□□□□ 0.71
COL4A3BP-204ENST00000405807 RTL1A6NKG5 1358 aa19.48■□□□□ 0.71
COL4A3BP-204ENST00000405807 MAP2P11137 1827 aaKnown RBP19.48■□□□□ 0.71
COL4A3BP-204ENST00000405807 HMMRO75330 724 aa19.48■□□□□ 0.71
COL4A3BP-204ENST00000405807 NEK4P51957 841 aa19.48■□□□□ 0.71
COL4A3BP-204ENST00000405807 TNNT3P45378 269 aaPredicted RBP19.47■□□□□ 0.71
COL4A3BP-204ENST00000405807 TMX3Q96JJ7 454 aa19.47■□□□□ 0.71
COL4A3BP-204ENST00000405807 OSBPL3Q9H4L5 887 aa19.47■□□□□ 0.71
COL4A3BP-204ENST00000405807 PTPRCP08575 1304 aa19.47■□□□□ 0.71
COL4A3BP-204ENST00000405807 AATKQ6ZMQ8 1374 aa19.47■□□□□ 0.71
COL4A3BP-204ENST00000405807 DCTN1Q14203 1278 aa19.47■□□□□ 0.71
COL4A3BP-204ENST00000405807 PDCL2Q8N4E4 241 aa19.47■□□□□ 0.71
COL4A3BP-204ENST00000405807 NSFL1CQ9UNZ2 370 aaKnown RBP19.47■□□□□ 0.71
COL4A3BP-204ENST00000405807 SYAP1Q96A49 352 aaPredicted RBP19.47■□□□□ 0.71
COL4A3BP-204ENST00000405807 BRD1O95696 1058 aa19.46■□□□□ 0.71
COL4A3BP-204ENST00000405807 SIRT1Q96EB6 747 aa19.46■□□□□ 0.71
COL4A3BP-204ENST00000405807 U2AF2P26368 475 aaKnown RBP eCLIP19.46■□□□□ 0.712e-8■■■■■ 27.8
COL4A3BP-204ENST00000405807 GABPB1Q06547 395 aaPredicted RBP19.46■□□□□ 0.71
COL4A3BP-204ENST00000405807 FOXD4L5Q5VV16 416 aaPredicted RBP19.45■□□□□ 0.7
COL4A3BP-204ENST00000405807 FOXD4L4Q8WXT5 416 aaPredicted RBP19.45■□□□□ 0.7
COL4A3BP-204ENST00000405807 TSPY26PQ9H489 355 aa19.45■□□□□ 0.7
COL4A3BP-204ENST00000405807 RGS12O14924 1447 aa19.45■□□□□ 0.7
COL4A3BP-204ENST00000405807 EDC4Q6P2E9 1401 aaKnown RBP19.45■□□□□ 0.7
COL4A3BP-204ENST00000405807 TMEM131LA2VDJ0 1609 aa19.44■□□□□ 0.7
COL4A3BP-204ENST00000405807 ALKQ9UM73 1620 aa19.44■□□□□ 0.7
COL4A3BP-204ENST00000405807 ZNF592Q92610 1267 aa19.44■□□□□ 0.7
COL4A3BP-204ENST00000405807 CHAMP1Q96JM3 812 aa19.44■□□□□ 0.7
COL4A3BP-204ENST00000405807 MEIS3Q99687 375 aa19.44■□□□□ 0.7
COL4A3BP-204ENST00000405807 CALCOCO1Q9P1Z2 691 aa19.44■□□□□ 0.7
COL4A3BP-204ENST00000405807 MSH6P52701 1360 aa19.44■□□□□ 0.7
COL4A3BP-204ENST00000405807 SLFN14P0C7P3 912 aa19.44■□□□□ 0.7
COL4A3BP-204ENST00000405807 PDE1AP54750 535 aa19.44■□□□□ 0.7
COL4A3BP-204ENST00000405807 CUL4AQ13619 759 aa19.44■□□□□ 0.7
COL4A3BP-204ENST00000405807 CT47A1Q5JQC4 288 aaPredicted RBP19.44■□□□□ 0.7
COL4A3BP-204ENST00000405807 NME9Q86XW9 330 aa19.44■□□□□ 0.7
COL4A3BP-204ENST00000405807 INTS4Q96HW7 963 aaKnown RBP19.44■□□□□ 0.7
COL4A3BP-204ENST00000405807 RNF214Q8ND24 703 aa19.43■□□□□ 0.7
COL4A3BP-204ENST00000405807 COG3Q96JB2 828 aa19.43■□□□□ 0.7
COL4A3BP-204ENST00000405807 FAM177BA6PVY3 158 aa19.43■□□□□ 0.7
COL4A3BP-204ENST00000405807 CHL1O00533 1208 aa19.43■□□□□ 0.7
COL4A3BP-204ENST00000405807 KIAA0232Q92628 1395 aa19.43■□□□□ 0.7
COL4A3BP-204ENST00000405807 RAPGEF3O95398 923 aa19.43■□□□□ 0.7
COL4A3BP-204ENST00000405807 TRERF1Q96PN7 1200 aa19.43■□□□□ 0.7
COL4A3BP-204ENST00000405807 FEZ2Q9UHY8 353 aaPredicted RBP19.43■□□□□ 0.7
COL4A3BP-204ENST00000405807 DLG5Q8TDM6 1919 aa19.42■□□□□ 0.7
COL4A3BP-204ENST00000405807 WAPLQ7Z5K2 1190 aa19.42■□□□□ 0.7
COL4A3BP-204ENST00000405807 MYCBPQ99417 103 aaPredicted RBP19.42■□□□□ 0.7
COL4A3BP-204ENST00000405807 GTF2F1P35269 517 aaKnown RBP eCLIP19.41■□□□□ 0.7
COL4A3BP-204ENST00000405807 MYO5BQ9ULV0 1848 aa19.41■□□□□ 0.7
COL4A3BP-204ENST00000405807 ANAPC15P60006 121 aa19.41■□□□□ 0.7
COL4A3BP-204ENST00000405807 KIAA2012Q0VF49 1180 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms