RNA–Protein interactions for RNA: ENST00000405755.6

PDE4D-207, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 2,294 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-207ENST00000405755 SOS1Q07889 1333 aaPredicted RBP11.95□□□□□ -0.5
PDE4D-207ENST00000405755 RGS12O14924 1447 aa11.94□□□□□ -0.5
PDE4D-207ENST00000405755 NHSL1Q5SYE7 1610 aa11.94□□□□□ -0.5
PDE4D-207ENST00000405755 ANP32AP39687 249 aaKnown RBP11.94□□□□□ -0.5
PDE4D-207ENST00000405755 HDGFL1Q5TGJ6 251 aa11.94□□□□□ -0.5
PDE4D-207ENST00000405755 SPG7Q9UQ90 795 aa11.94□□□□□ -0.5
PDE4D-207ENST00000405755 MEGF6O75095 1541 aa11.94□□□□□ -0.5
PDE4D-207ENST00000405755 INTS3Q68E01 1043 aaKnown RBP11.94□□□□□ -0.5
PDE4D-207ENST00000405755 SLC4A10Q6U841 1118 aa11.94□□□□□ -0.5
PDE4D-207ENST00000405755 G2E3Q7L622 706 aa11.94□□□□□ -0.5
PDE4D-207ENST00000405755 NPM2Q86SE8 214 aaKnown RBP11.94□□□□□ -0.5
PDE4D-207ENST00000405755 KDM3BQ7LBC6 1761 aa11.94□□□□□ -0.5
PDE4D-207ENST00000405755 OVOS2A0A0G2JMS6 1433 aa11.93□□□□□ -0.5
PDE4D-207ENST00000405755 FKBP5Q13451 457 aaPredicted RBP11.93□□□□□ -0.5
PDE4D-207ENST00000405755 FAM161AQ3B820 660 aa11.93□□□□□ -0.5
PDE4D-207ENST00000405755 F6X3S4 739 aa11.93□□□□□ -0.5
PDE4D-207ENST00000405755 EIF2S2P20042 333 aaKnown RBP11.93□□□□□ -0.5
PDE4D-207ENST00000405755 EIF4A1P60842 406 aaKnown RBP11.93□□□□□ -0.5
PDE4D-207ENST00000405755 FLIIQ13045 1269 aa11.93□□□□□ -0.5
PDE4D-207ENST00000405755 TOM1L2Q6ZVM7 507 aa11.93□□□□□ -0.5
PDE4D-207ENST00000405755 ABCA3Q99758 1704 aa11.93□□□□□ -0.5
PDE4D-207ENST00000405755 KCNQ3O43525 872 aa11.91□□□□□ -0.5
PDE4D-207ENST00000405755 SMC5Q8IY18 1101 aa11.91□□□□□ -0.5
PDE4D-207ENST00000405755 IFNL2Q8IZJ0 200 aa11.91□□□□□ -0.5
PDE4D-207ENST00000405755 WDR17Q8IZU2 1322 aa11.91□□□□□ -0.5
PDE4D-207ENST00000405755 PHKG2P15735 406 aa11.9□□□□□ -0.5
PDE4D-207ENST00000405755 C8orf34Q49A92 452 aa11.9□□□□□ -0.5
PDE4D-207ENST00000405755 CHMP4AQ9BY43 222 aa11.9□□□□□ -0.5
PDE4D-207ENST00000405755 STRN4Q9NRL3 753 aa11.9□□□□□ -0.5
PDE4D-207ENST00000405755 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.9□□□□□ -0.5
PDE4D-207ENST00000405755 COL5A2P05997 1499 aaPredicted RBP11.9□□□□□ -0.5
PDE4D-207ENST00000405755 HOXB7P09629 217 aa11.9□□□□□ -0.5
PDE4D-207ENST00000405755 CCT4P50991 539 aaKnown RBP11.9□□□□□ -0.5
PDE4D-207ENST00000405755 ROBO1Q9Y6N7 1651 aa11.89□□□□□ -0.51
PDE4D-207ENST00000405755 EVA1CP58658 441 aa11.89□□□□□ -0.51
PDE4D-207ENST00000405755 CACNA1FO60840 1977 aa11.89□□□□□ -0.51
PDE4D-207ENST00000405755 MEIS3Q99687 375 aa11.89□□□□□ -0.51
PDE4D-207ENST00000405755 CHPF2Q9P2E5 772 aa11.89□□□□□ -0.51
PDE4D-207ENST00000405755 KDM6AO15550 1401 aaPredicted RBP11.88□□□□□ -0.51
PDE4D-207ENST00000405755 SIPA1L3O60292 1781 aaPredicted RBP11.88□□□□□ -0.51
PDE4D-207ENST00000405755 SCN11AQ9UI33 1791 aa11.88□□□□□ -0.51
PDE4D-207ENST00000405755 GCC1Q96CN9 775 aa11.88□□□□□ -0.51
PDE4D-207ENST00000405755 PHAXQ9H814 394 aaKnown RBP11.88□□□□□ -0.51
PDE4D-207ENST00000405755 ADAMTS7Q9UKP4 1686 aa11.88□□□□□ -0.51
PDE4D-207ENST00000405755 PKD1L3Q7Z443 1732 aa11.88□□□□□ -0.51
PDE4D-207ENST00000405755 PLEKHG2Q9H7P9 1386 aa11.88□□□□□ -0.51
PDE4D-207ENST00000405755 PARP4Q9UKK3 1724 aaKnown RBP11.88□□□□□ -0.51
PDE4D-207ENST00000405755 CYP27B1O15528 508 aa11.88□□□□□ -0.51
PDE4D-207ENST00000405755 NFATC2IPQ8NCF5 419 aa11.88□□□□□ -0.51
PDE4D-207ENST00000405755 DCAF5Q96JK2 942 aa11.88□□□□□ -0.51
PDE4D-207ENST00000405755 LNPKQ9C0E8 428 aa11.88□□□□□ -0.51
PDE4D-207ENST00000405755 SLC52A2Q9HAB3 445 aa11.88□□□□□ -0.51
PDE4D-207ENST00000405755 HSP90AB1P08238 724 aaKnown RBP11.87□□□□□ -0.51
PDE4D-207ENST00000405755 NUCB1Q02818 461 aa11.87□□□□□ -0.51
PDE4D-207ENST00000405755 ANKRD45Q5TZF3 282 aa11.87□□□□□ -0.51
PDE4D-207ENST00000405755 SIRT2Q8IXJ6 389 aa11.87□□□□□ -0.51
PDE4D-207ENST00000405755 CHD1LQ86WJ1 897 aa11.86□□□□□ -0.51
PDE4D-207ENST00000405755 USP35Q9P2H5 1018 aa11.86□□□□□ -0.51
PDE4D-207ENST00000405755 PCDH11XQ9BZA7 1347 aa11.86□□□□□ -0.51
PDE4D-207ENST00000405755 PCDH11YQ9BZA8 1340 aa11.86□□□□□ -0.51
PDE4D-207ENST00000405755 GIGYF1O75420 1035 aaPredicted RBP11.86□□□□□ -0.51
PDE4D-207ENST00000405755 ANXA1P04083 346 aa11.86□□□□□ -0.51
PDE4D-207ENST00000405755 SLC39A6Q13433 755 aa11.86□□□□□ -0.51
PDE4D-207ENST00000405755 ZNF790Q6PG37 636 aa11.86□□□□□ -0.51
PDE4D-207ENST00000405755 LARP1Q6PKG0 1096 aaKnown RBP11.86□□□□□ -0.51
PDE4D-207ENST00000405755 TTC5Q8N0Z6 440 aa11.86□□□□□ -0.51
PDE4D-207ENST00000405755 ATP10DQ9P241 1426 aa11.85□□□□□ -0.51
PDE4D-207ENST00000405755 IL2RBP14784 551 aa11.85□□□□□ -0.51
PDE4D-207ENST00000405755 RPAP2Q8IXW5 612 aaPredicted RBP11.85□□□□□ -0.51
PDE4D-207ENST00000405755 ZCRB1Q8TBF4 217 aaKnown RBP11.85□□□□□ -0.51
PDE4D-207ENST00000405755 BCL11AQ9H165 835 aa11.85□□□□□ -0.51
PDE4D-207ENST00000405755 DBF4Q9UBU7 674 aaPredicted RBP11.85□□□□□ -0.51
PDE4D-207ENST00000405755 PRAMEF22A3QJZ6 481 aa11.85□□□□□ -0.51
PDE4D-207ENST00000405755 MSH5O43196 834 aa11.85□□□□□ -0.51
PDE4D-207ENST00000405755 CABP4P57796 275 aa11.85□□□□□ -0.51
PDE4D-207ENST00000405755 CEP85Q6P2H3 762 aa11.85□□□□□ -0.51
PDE4D-207ENST00000405755 ERICH6Q7L0X2 663 aa11.85□□□□□ -0.51
PDE4D-207ENST00000405755 ANKRD44Q8N8A2 993 aa11.85□□□□□ -0.51
PDE4D-207ENST00000405755 CARD10Q9BWT7 1032 aa11.85□□□□□ -0.51
PDE4D-207ENST00000405755 ZBTB47Q9UFB7 747 aaPredicted RBP11.85□□□□□ -0.51
PDE4D-207ENST00000405755 PXDNLA1KZ92 1463 aa11.84□□□□□ -0.51
PDE4D-207ENST00000405755 BTG4Q9NY30 223 aa11.84□□□□□ -0.51
PDE4D-207ENST00000405755 GNAI2P04899 355 aa11.84□□□□□ -0.51
PDE4D-207ENST00000405755 GNAI3P08754 354 aa11.84□□□□□ -0.51
PDE4D-207ENST00000405755 IPO9Q96P70 1041 aaKnown RBP11.84□□□□□ -0.51
PDE4D-207ENST00000405755 AHDC1Q5TGY3 1603 aaPredicted RBP11.83□□□□□ -0.52
PDE4D-207ENST00000405755 HEG1Q9ULI3 1381 aa11.83□□□□□ -0.52
PDE4D-207ENST00000405755 HMMRO75330 724 aa11.83□□□□□ -0.52
PDE4D-207ENST00000405755 MRC1P22897 1456 aa11.83□□□□□ -0.52
PDE4D-207ENST00000405755 PI4KAP2A4QPH2 592 aa11.83□□□□□ -0.52
PDE4D-207ENST00000405755 PI4KAP1Q8N8J0 262 aa11.83□□□□□ -0.52
PDE4D-207ENST00000405755 DDX54Q8TDD1 881 aaKnown RBP11.83□□□□□ -0.52
PDE4D-207ENST00000405755 SRCIN1Q9C0H9 1055 aa11.83□□□□□ -0.52
PDE4D-207ENST00000405755 N4BP2Q86UW6 1770 aaPredicted RBP11.82□□□□□ -0.52
PDE4D-207ENST00000405755 DNAAF4Q8WXU2 420 aa11.82□□□□□ -0.52
PDE4D-207ENST00000405755 ZNF496Q96IT1 587 aaPredicted RBP11.81□□□□□ -0.52
PDE4D-207ENST00000405755 DCTPP1Q9H773 170 aa11.81□□□□□ -0.52
PDE4D-207ENST00000405755 APBB1O00213 710 aa11.81□□□□□ -0.52
PDE4D-207ENST00000405755 UBTFL1P0CB47 393 aaPredicted RBP11.81□□□□□ -0.52
PDE4D-207ENST00000405755 PROSER3Q2NL68 480 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms