RNA–Protein interactions for RNA: ENST00000401893.7

RBBP4-203, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-203ENST00000401893 SYT17Q9BSW7 474 aa16.96■□□□□ 0.31
RBBP4-203ENST00000401893 ATG3Q9NT62 314 aa16.96■□□□□ 0.31
RBBP4-203ENST00000401893 COL24A1Q17RW2 1714 aa16.96■□□□□ 0.3
RBBP4-203ENST00000401893 U2SURPO15042 1029 aaKnown RBP16.95■□□□□ 0.3
RBBP4-203ENST00000401893 AKAP4Q5JQC9 854 aa16.95■□□□□ 0.3
RBBP4-203ENST00000401893 KLHL34Q8N239 644 aa16.95■□□□□ 0.3
RBBP4-203ENST00000401893 RBM42Q9BTD8 480 aaKnown RBP16.95■□□□□ 0.3
RBBP4-203ENST00000401893 MAP3K5Q99683 1374 aa16.93■□□□□ 0.3
RBBP4-203ENST00000401893 SCN11AQ9UI33 1791 aa16.93■□□□□ 0.3
RBBP4-203ENST00000401893 PHF14O94880 888 aa16.93■□□□□ 0.3
RBBP4-203ENST00000401893 ZNF831Q5JPB2 1677 aa16.93■□□□□ 0.3
RBBP4-203ENST00000401893 COL3A1P02461 1466 aaPredicted RBP16.93■□□□□ 0.3
RBBP4-203ENST00000401893 SSFA2P28290 1259 aa16.92■□□□□ 0.3
RBBP4-203ENST00000401893 NFATC2IPQ8NCF5 419 aa16.92■□□□□ 0.3
RBBP4-203ENST00000401893 LINC00116Q8NCU8 138 aa16.92■□□□□ 0.3
RBBP4-203ENST00000401893 UBR3Q6ZT12 1888 aa16.92■□□□□ 0.3
RBBP4-203ENST00000401893 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.91■□□□□ 0.3
RBBP4-203ENST00000401893 GNPATO15228 680 aa16.91■□□□□ 0.3
RBBP4-203ENST00000401893 ITPK1Q13572 414 aa16.91■□□□□ 0.3
RBBP4-203ENST00000401893 MSL1Q68DK7 614 aa16.91■□□□□ 0.3
RBBP4-203ENST00000401893 NUDCQ9Y266 331 aa16.91■□□□□ 0.3
RBBP4-203ENST00000401893 MTHFSDQ2M296 383 aaKnown RBP16.89■□□□□ 0.29
RBBP4-203ENST00000401893 PTCD1O75127 700 aaKnown RBP16.88■□□□□ 0.29
RBBP4-203ENST00000401893 PPP2R1AP30153 589 aa16.88■□□□□ 0.29
RBBP4-203ENST00000401893 SLC52A2Q9HAB3 445 aa16.88■□□□□ 0.29
RBBP4-203ENST00000401893 RTCBQ9Y3I0 505 aaKnown RBP16.88■□□□□ 0.29
RBBP4-203ENST00000401893 COL5A3P25940 1745 aaPredicted RBP16.87■□□□□ 0.29
RBBP4-203ENST00000401893 RNMTO43148 476 aaKnown RBP16.87■□□□□ 0.29
RBBP4-203ENST00000401893 YY1P25490 414 aa16.87■□□□□ 0.29
RBBP4-203ENST00000401893 GAS2L2Q8NHY3 880 aa16.87■□□□□ 0.29
RBBP4-203ENST00000401893 VIRMAQ69YN4 1812 aaKnown RBP16.86■□□□□ 0.29
RBBP4-203ENST00000401893 MRC1P22897 1456 aa16.86■□□□□ 0.29
RBBP4-203ENST00000401893 RC3H1Q5TC82 1133 aaKnown RBP16.86■□□□□ 0.29
RBBP4-203ENST00000401893 LGR6Q9HBX8 967 aa16.86■□□□□ 0.29
RBBP4-203ENST00000401893 CNTNAP4Q9C0A0 1308 aa16.86■□□□□ 0.29
RBBP4-203ENST00000401893 ADRA2BP18089 450 aa16.85■□□□□ 0.29
RBBP4-203ENST00000401893 TRAPPC3LQ5T215 181 aa16.85■□□□□ 0.29
RBBP4-203ENST00000401893 AMIGO3Q86WK7 504 aa16.85■□□□□ 0.29
RBBP4-203ENST00000401893 SLC4A9Q96Q91 983 aa16.85■□□□□ 0.29
RBBP4-203ENST00000401893 ADAMTS7Q9UKP4 1686 aa16.85■□□□□ 0.29
RBBP4-203ENST00000401893 GNAT3A8MTJ3 354 aa16.84■□□□□ 0.29
RBBP4-203ENST00000401893 U2AF1L5P0DN76 240 aaPredicted RBP16.84■□□□□ 0.29
RBBP4-203ENST00000401893 U2AF1Q01081 240 aaKnown RBP eCLIP16.84■□□□□ 0.29
RBBP4-203ENST00000401893 GPR162Q16538 588 aa16.84■□□□□ 0.29
RBBP4-203ENST00000401893 SMIM5Q71RC9 77 aa16.84■□□□□ 0.29
RBBP4-203ENST00000401893 CICQ96RK0 1608 aaPredicted RBP16.84■□□□□ 0.29
RBBP4-203ENST00000401893 PRKAR2BP31323 418 aa16.83■□□□□ 0.28
RBBP4-203ENST00000401893 TEFQ10587 303 aa16.83■□□□□ 0.28
RBBP4-203ENST00000401893 PELP1Q8IZL8 1130 aaKnown RBP16.83■□□□□ 0.28
RBBP4-203ENST00000401893 TJP1Q07157 1748 aa16.82■□□□□ 0.28
RBBP4-203ENST00000401893 RPS6KA4O75676 772 aa16.82■□□□□ 0.28
RBBP4-203ENST00000401893 RFC4P35249 363 aa16.82■□□□□ 0.28
RBBP4-203ENST00000401893 TTC5Q8N0Z6 440 aa16.82■□□□□ 0.28
RBBP4-203ENST00000401893 CD2APQ9Y5K6 639 aa16.82■□□□□ 0.28
RBBP4-203ENST00000401893 CRKLP46109 303 aaKnown RBP16.81■□□□□ 0.28
RBBP4-203ENST00000401893 NLGN2Q8NFZ4 835 aa16.81■□□□□ 0.28
RBBP4-203ENST00000401893 RSPH6AQ9H0K4 717 aa16.81■□□□□ 0.28
RBBP4-203ENST00000401893 NEFMP07197 916 aa16.8■□□□□ 0.28
RBBP4-203ENST00000401893 SLC39A6Q13433 755 aa16.8■□□□□ 0.28
RBBP4-203ENST00000401893 NLGN1Q8N2Q7 840 aa16.8■□□□□ 0.28
RBBP4-203ENST00000401893 ARHGEF1Q92888 912 aaKnown RBP16.8■□□□□ 0.28
RBBP4-203ENST00000401893 FCHSD2O94868 740 aa16.79■□□□□ 0.28
RBBP4-203ENST00000401893 RTF1Q92541 710 aaKnown RBP16.78■□□□□ 0.28
RBBP4-203ENST00000401893 KCPQ6ZWJ8 1503 aa16.78■□□□□ 0.28
RBBP4-203ENST00000401893 C4AP0C0L4 1744 aa16.78■□□□□ 0.28
RBBP4-203ENST00000401893 MMP10P09238 476 aa16.77■□□□□ 0.28
RBBP4-203ENST00000401893 DNAJC10Q8IXB1 793 aa16.77■□□□□ 0.28
RBBP4-203ENST00000401893 VSIG10Q8N0Z9 540 aa16.77■□□□□ 0.28
RBBP4-203ENST00000401893 PHACTR3Q96KR7 559 aa16.77■□□□□ 0.28
RBBP4-203ENST00000401893 CCDC87Q9NVE4 849 aa16.77■□□□□ 0.28
RBBP4-203ENST00000401893 MYH14Q7Z406 1995 aaKnown RBP16.77■□□□□ 0.27
RBBP4-203ENST00000401893 UBR2Q8IWV8 1755 aa16.77■□□□□ 0.27
RBBP4-203ENST00000401893 GRIN3BO60391 1043 aa16.76■□□□□ 0.27
RBBP4-203ENST00000401893 IL17REQ8NFR9 667 aa16.76■□□□□ 0.27
RBBP4-203ENST00000401893 CHD4Q14839 1912 aa16.76■□□□□ 0.27
RBBP4-203ENST00000401893 SIPA1L3O60292 1781 aaPredicted RBP16.75■□□□□ 0.27
RBBP4-203ENST00000401893 GYS1P13807 737 aa16.75■□□□□ 0.27
RBBP4-203ENST00000401893 RALBP1Q15311 655 aa16.75■□□□□ 0.27
RBBP4-203ENST00000401893 STARD3NLO95772 234 aa16.74■□□□□ 0.27
RBBP4-203ENST00000401893 CYP19A1P11511 503 aaPredicted RBP16.74■□□□□ 0.27
RBBP4-203ENST00000401893 DDX10Q13206 875 aaKnown RBP16.74■□□□□ 0.27
RBBP4-203ENST00000401893 INTS5Q6P9B9 1019 aaKnown RBP16.74■□□□□ 0.27
RBBP4-203ENST00000401893 ZNF790Q6PG37 636 aa16.74■□□□□ 0.27
RBBP4-203ENST00000401893 PNNQ9H307 717 aaKnown RBP16.74■□□□□ 0.27
RBBP4-203ENST00000401893 PARP3Q9Y6F1 533 aa16.74■□□□□ 0.27
RBBP4-203ENST00000401893 CEMIPQ8WUJ3 1361 aa16.74■□□□□ 0.27
RBBP4-203ENST00000401893 USP42Q9H9J4 1324 aaKnown RBP16.73■□□□□ 0.27
RBBP4-203ENST00000401893 ZPR1O75312 459 aa16.73■□□□□ 0.27
RBBP4-203ENST00000401893 TEX13AQ9BXU3 409 aaPredicted RBP16.73■□□□□ 0.27
RBBP4-203ENST00000401893 BTBD11A6QL63 1104 aa16.72■□□□□ 0.27
RBBP4-203ENST00000401893 FMNL2Q96PY5 1086 aa16.72■□□□□ 0.27
RBBP4-203ENST00000401893 HEG1Q9ULI3 1381 aa16.72■□□□□ 0.27
RBBP4-203ENST00000401893 SOS1Q07889 1333 aaPredicted RBP16.71■□□□□ 0.27
RBBP4-203ENST00000401893 HTATSF1O43719 755 aaKnown RBP16.71■□□□□ 0.27
RBBP4-203ENST00000401893 ZNF496Q96IT1 587 aaPredicted RBP16.71■□□□□ 0.27
RBBP4-203ENST00000401893 SRP68Q9UHB9 627 aaKnown RBP16.71■□□□□ 0.27
RBBP4-203ENST00000401893 COL15A1P39059 1388 aa16.71■□□□□ 0.27
RBBP4-203ENST00000401893 MAPK8IP3Q9UPT6 1336 aa16.7■□□□□ 0.26
RBBP4-203ENST00000401893 YBX3P16989 372 aaKnown RBP eCLIP16.7■□□□□ 0.265e-18■□□□□ 10.5
RBBP4-203ENST00000401893 MCM10Q7L590 875 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms