RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 RPAP2Q8IXW5 612 aaPredicted RBP11.67□□□□□ -0.54
PTPRM-203ENST00000400060 SEC24BO95487 1268 aa11.67□□□□□ -0.54
PTPRM-203ENST00000400060 CCDC27Q2M243 656 aa11.67□□□□□ -0.54
PTPRM-203ENST00000400060 GAS2L3Q86XJ1 694 aa11.67□□□□□ -0.54
PTPRM-203ENST00000400060 CNTROBQ8N137 903 aa11.67□□□□□ -0.54
PTPRM-203ENST00000400060 CCDC9Q9Y3X0 531 aaKnown RBP11.67□□□□□ -0.54
PTPRM-203ENST00000400060 CUL7Q14999 1698 aa11.67□□□□□ -0.54
PTPRM-203ENST00000400060 FILIP1LQ4L180 1135 aa11.67□□□□□ -0.54
PTPRM-203ENST00000400060 CCDC186Q7Z3E2 898 aa11.67□□□□□ -0.54
PTPRM-203ENST00000400060 GOLGA1Q92805 767 aa11.67□□□□□ -0.54
PTPRM-203ENST00000400060 HDXQ7Z353 690 aa11.66□□□□□ -0.54
PTPRM-203ENST00000400060 DNAJC21Q5F1R6 531 aaKnown RBP11.66□□□□□ -0.54
PTPRM-203ENST00000400060 PLCD4Q9BRC7 762 aa11.66□□□□□ -0.54
PTPRM-203ENST00000400060 EPRSP07814 1512 aaKnown RBP11.66□□□□□ -0.54
PTPRM-203ENST00000400060 ARHGEF12Q9NZN5 1544 aa11.66□□□□□ -0.54
PTPRM-203ENST00000400060 C9orf84Q5VXU9 1444 aa11.66□□□□□ -0.54
PTPRM-203ENST00000400060 SPATS2Q86XZ4 545 aaKnown RBP11.66□□□□□ -0.54
PTPRM-203ENST00000400060 GAS2L2Q8NHY3 880 aa11.66□□□□□ -0.54
PTPRM-203ENST00000400060 DDX41Q9UJV9 622 aaKnown RBP11.66□□□□□ -0.54
PTPRM-203ENST00000400060 KIF5CO60282 957 aa11.66□□□□□ -0.54
PTPRM-203ENST00000400060 SKILP12757 684 aa11.66□□□□□ -0.54
PTPRM-203ENST00000400060 MORC2Q9Y6X9 1032 aaPredicted RBP11.66□□□□□ -0.54
PTPRM-203ENST00000400060 PIK3C2GO75747 1445 aa11.66□□□□□ -0.54
PTPRM-203ENST00000400060 RPAINQ86UA6 219 aa11.65□□□□□ -0.54
PTPRM-203ENST00000400060 PDILTQ8N807 584 aa11.65□□□□□ -0.54
PTPRM-203ENST00000400060 DYDC1Q8WWB3 177 aa11.65□□□□□ -0.54
PTPRM-203ENST00000400060 RSRC1Q96IZ7 334 aaKnown RBP11.65□□□□□ -0.54
PTPRM-203ENST00000400060 CYP46A1Q9Y6A2 500 aa11.65□□□□□ -0.54
PTPRM-203ENST00000400060 SERPINC1P01008 464 aa11.65□□□□□ -0.54
PTPRM-203ENST00000400060 GBP2P32456 591 aaPredicted RBP11.65□□□□□ -0.54
PTPRM-203ENST00000400060 ARHGAP29Q52LW3 1261 aa11.65□□□□□ -0.54
PTPRM-203ENST00000400060 B4GALNT4Q76KP1 1039 aa11.65□□□□□ -0.54
PTPRM-203ENST00000400060 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.65□□□□□ -0.54
PTPRM-203ENST00000400060 CCDC172P0C7W6 258 aa11.65□□□□□ -0.54
PTPRM-203ENST00000400060 CASTP20810 708 aaKnown RBP11.65□□□□□ -0.54
PTPRM-203ENST00000400060 MRVI1Q9Y6F6 885 aa11.65□□□□□ -0.54
PTPRM-203ENST00000400060 EFCAB13Q8IY85 973 aa11.65□□□□□ -0.55
PTPRM-203ENST00000400060 NCAPGQ9BPX3 1015 aa11.65□□□□□ -0.55
PTPRM-203ENST00000400060 EXOSC9Q06265 439 aaKnown RBP11.64□□□□□ -0.55
PTPRM-203ENST00000400060 KIAA0586Q9BVV6 1533 aa11.64□□□□□ -0.55
PTPRM-203ENST00000400060 CLEC17AQ6ZS10 378 aa11.64□□□□□ -0.55
PTPRM-203ENST00000400060 CENPHQ9H3R5 247 aa11.64□□□□□ -0.55
PTPRM-203ENST00000400060 MPHOSPH10O00566 681 aaKnown RBP11.64□□□□□ -0.55
PTPRM-203ENST00000400060 TMX4Q9H1E5 349 aaPredicted RBP11.64□□□□□ -0.55
PTPRM-203ENST00000400060 JRKLQ9Y4A0 524 aa11.64□□□□□ -0.55
PTPRM-203ENST00000400060 ZSCAN22P10073 491 aaPredicted RBP11.64□□□□□ -0.55
PTPRM-203ENST00000400060 LARP1BQ659C4 914 aaKnown RBP11.64□□□□□ -0.55
PTPRM-203ENST00000400060 PPFIBP1Q86W92 1011 aa11.64□□□□□ -0.55
PTPRM-203ENST00000400060 PRG4Q92954 1404 aaPredicted RBP11.63□□□□□ -0.55
PTPRM-203ENST00000400060 ERCC3P19447 782 aa11.63□□□□□ -0.55
PTPRM-203ENST00000400060 NEFHP12036 1026 aa11.63□□□□□ -0.55
PTPRM-203ENST00000400060 ZNF165P49910 485 aa11.63□□□□□ -0.55
PTPRM-203ENST00000400060 USP48Q86UV5 1035 aa11.63□□□□□ -0.55
PTPRM-203ENST00000400060 ZNF853P0CG23 659 aa11.63□□□□□ -0.55
PTPRM-203ENST00000400060 CEP83Q9Y592 693 aa11.63□□□□□ -0.55
PTPRM-203ENST00000400060 IL16Q14005 1332 aa11.63□□□□□ -0.55
PTPRM-203ENST00000400060 SOX12O15370 315 aa11.63□□□□□ -0.55
PTPRM-203ENST00000400060 AP1ARQ63HQ0 302 aa11.63□□□□□ -0.55
PTPRM-203ENST00000400060 MCTP2Q6DN12 878 aa11.63□□□□□ -0.55
PTPRM-203ENST00000400060 JMYQ8N9B5 988 aa11.63□□□□□ -0.55
PTPRM-203ENST00000400060 RBM33Q96EV2 1170 aaKnown RBP11.63□□□□□ -0.55
PTPRM-203ENST00000400060 SPTLC3Q9NUV7 552 aa11.63□□□□□ -0.55
PTPRM-203ENST00000400060 PTGS1P23219 599 aa11.62□□□□□ -0.55
PTPRM-203ENST00000400060 SYNE3Q6ZMZ3 975 aa11.62□□□□□ -0.55
PTPRM-203ENST00000400060 GTF3C6Q969F1 213 aa11.62□□□□□ -0.55
PTPRM-203ENST00000400060 STX6O43752 255 aa11.62□□□□□ -0.55
PTPRM-203ENST00000400060 ARHGAP25P42331 645 aa11.62□□□□□ -0.55
PTPRM-203ENST00000400060 CPLX2Q6PUV4 134 aaKnown RBP11.62□□□□□ -0.55
PTPRM-203ENST00000400060 RRP15Q9Y3B9 282 aaKnown RBP11.62□□□□□ -0.55
PTPRM-203ENST00000400060 ERLIN2O94905 339 aa11.62□□□□□ -0.55
PTPRM-203ENST00000400060 LMOD2Q6P5Q4 547 aa11.62□□□□□ -0.55
PTPRM-203ENST00000400060 ANKRD18AQ8IVF6 992 aa11.62□□□□□ -0.55
PTPRM-203ENST00000400060 IMPACTQ9P2X3 320 aa11.62□□□□□ -0.55
PTPRM-203ENST00000400060 LAMC3Q9Y6N6 1575 aa11.61□□□□□ -0.55
PTPRM-203ENST00000400060 OPA1O60313 960 aa11.61□□□□□ -0.55
PTPRM-203ENST00000400060 TTC22Q5TAA0 569 aa11.61□□□□□ -0.55
PTPRM-203ENST00000400060 EXOC4Q96A65 974 aa11.61□□□□□ -0.55
PTPRM-203ENST00000400060 ARHGAP5Q13017 1502 aa11.61□□□□□ -0.55
PTPRM-203ENST00000400060 TMCO5BA8MYB1 307 aa11.61□□□□□ -0.55
PTPRM-203ENST00000400060 KIF3CO14782 793 aa11.61□□□□□ -0.55
PTPRM-203ENST00000400060 HSPA4P34932 840 aa11.61□□□□□ -0.55
PTPRM-203ENST00000400060 MAGEA9P43362 315 aa11.61□□□□□ -0.55
PTPRM-203ENST00000400060 ATP2B3Q16720 1220 aa11.61□□□□□ -0.55
PTPRM-203ENST00000400060 EIF2AK4Q9P2K8 1649 aaKnown RBP11.61□□□□□ -0.55
PTPRM-203ENST00000400060 DIAPH1O60610 1272 aaKnown RBP11.61□□□□□ -0.55
PTPRM-203ENST00000400060 TMEM51Q9NW97 253 aa11.61□□□□□ -0.55
PTPRM-203ENST00000400060 VPS18Q9P253 973 aa11.61□□□□□ -0.55
PTPRM-203ENST00000400060 LIMCH1Q9UPQ0 1083 aa11.61□□□□□ -0.55
PTPRM-203ENST00000400060 OAS2P29728 719 aaKnown RBP11.61□□□□□ -0.55
PTPRM-203ENST00000400060 NUTM2DQ5VT03 806 aaPredicted RBP11.61□□□□□ -0.55
PTPRM-203ENST00000400060 TMEM57Q8N5G2 664 aa11.61□□□□□ -0.55
PTPRM-203ENST00000400060 TMX3Q96JJ7 454 aa11.61□□□□□ -0.55
PTPRM-203ENST00000400060 IQGAP2Q13576 1575 aa11.61□□□□□ -0.55
PTPRM-203ENST00000400060 GNAI3P08754 354 aa11.6□□□□□ -0.55
PTPRM-203ENST00000400060 TRMT1Q9NXH9 659 aaKnown RBP11.6□□□□□ -0.55
PTPRM-203ENST00000400060 PCDHB15Q9Y5E8 787 aa11.6□□□□□ -0.55
PTPRM-203ENST00000400060 ASXL1Q8IXJ9 1541 aa11.6□□□□□ -0.55
PTPRM-203ENST00000400060 BRD3Q15059 726 aa11.6□□□□□ -0.55
PTPRM-203ENST00000400060 ELF2Q15723 593 aa11.6□□□□□ -0.55
PTPRM-203ENST00000400060 OTUD6BQ8N6M0 293 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms