RNA–Protein interactions for RNA: ENST00000399237.6

RUNX1-204, Transcript of runt related transcription factor 1, humanhuman

TSL 5

Gene RUNX1, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-204ENST00000399237 MSH5O43196 834 aa28.94■■■□□ 2.22
RUNX1-204ENST00000399237 ZNF831Q5JPB2 1677 aa28.93■■■□□ 2.22
RUNX1-204ENST00000399237 LOC102724428A0A0B4J2F2 783 aa28.93■■■□□ 2.22
RUNX1-204ENST00000399237 ERVV-2B6SEH9 535 aa28.93■■■□□ 2.22
RUNX1-204ENST00000399237 SIK1P57059 783 aa28.93■■■□□ 2.22
RUNX1-204ENST00000399237 ITPK1Q13572 414 aa28.93■■■□□ 2.22
RUNX1-204ENST00000399237 SLC4A9Q96Q91 983 aa28.93■■■□□ 2.22
RUNX1-204ENST00000399237 COL5A3P25940 1745 aaPredicted RBP28.93■■■□□ 2.22
RUNX1-204ENST00000399237 HSP90AB1P08238 724 aaKnown RBP28.92■■■□□ 2.22
RUNX1-204ENST00000399237 SMIM5Q71RC9 77 aa28.92■■■□□ 2.22
RUNX1-204ENST00000399237 COL23A1Q86Y22 540 aaPredicted RBP28.92■■■□□ 2.22
RUNX1-204ENST00000399237 LINC00116Q8NCU8 138 aa28.92■■■□□ 2.22
RUNX1-204ENST00000399237 PPP2R1AP30153 589 aa28.91■■■□□ 2.22
RUNX1-204ENST00000399237 C1orf141Q5JVX7 400 aa28.9■■■□□ 2.22
RUNX1-204ENST00000399237 MRC1P22897 1456 aa28.9■■■□□ 2.22
RUNX1-204ENST00000399237 MTHFSDQ2M296 383 aaKnown RBP28.89■■■□□ 2.22
RUNX1-204ENST00000399237 TJP1Q07157 1748 aa28.87■■■□□ 2.21
RUNX1-204ENST00000399237 U2SURPO15042 1029 aaKnown RBP28.87■■■□□ 2.21
RUNX1-204ENST00000399237 GPR162Q16538 588 aa28.87■■■□□ 2.21
RUNX1-204ENST00000399237 AKAP4Q5JQC9 854 aa28.87■■■□□ 2.21
RUNX1-204ENST00000399237 MSL1Q68DK7 614 aa28.87■■■□□ 2.21
RUNX1-204ENST00000399237 LGR6Q9HBX8 967 aa28.87■■■□□ 2.21
RUNX1-204ENST00000399237 CABP4P57796 275 aa28.86■■■□□ 2.21
RUNX1-204ENST00000399237 CICQ96RK0 1608 aaPredicted RBP28.85■■■□□ 2.21
RUNX1-204ENST00000399237 NFATC2IPQ8NCF5 419 aa28.85■■■□□ 2.21
RUNX1-204ENST00000399237 NLGN2Q8NFZ4 835 aa28.85■■■□□ 2.21
RUNX1-204ENST00000399237 ATP6V1AP38606 617 aa28.84■■■□□ 2.21
RUNX1-204ENST00000399237 ZNF784Q8NCA9 323 aaPredicted RBP28.84■■■□□ 2.21
RUNX1-204ENST00000399237 GOLGB1Q14789 3259 aaKnown RBP28.84■■■□□ 2.21
RUNX1-204ENST00000399237 PELP1Q8IZL8 1130 aaKnown RBP28.83■■■□□ 2.21
RUNX1-204ENST00000399237 MYH14Q7Z406 1995 aaKnown RBP28.82■■■□□ 2.2
RUNX1-204ENST00000399237 HMGB2P26583 209 aaKnown RBP28.82■■■□□ 2.2
RUNX1-204ENST00000399237 AK7Q96M32 723 aa28.82■■■□□ 2.2
RUNX1-204ENST00000399237 RNMTO43148 476 aaKnown RBP28.81■■■□□ 2.2
RUNX1-204ENST00000399237 SIPA1L3O60292 1781 aaPredicted RBP28.8■■■□□ 2.2
RUNX1-204ENST00000399237 RBM42Q9BTD8 480 aaKnown RBP28.8■■■□□ 2.2
RUNX1-204ENST00000399237 PHF14O94880 888 aa28.79■■■□□ 2.2
RUNX1-204ENST00000399237 FLAD1Q8NFF5 587 aa28.79■■■□□ 2.2
RUNX1-204ENST00000399237 RSPH6AQ9H0K4 717 aa28.79■■■□□ 2.2
RUNX1-204ENST00000399237 SLC52A2Q9HAB3 445 aa28.79■■■□□ 2.2
RUNX1-204ENST00000399237 PHACTR3Q96KR7 559 aa28.78■■■□□ 2.2
RUNX1-204ENST00000399237 KCPQ6ZWJ8 1503 aa28.78■■■□□ 2.2
RUNX1-204ENST00000399237 UBR2Q8IWV8 1755 aa28.78■■■□□ 2.2
RUNX1-204ENST00000399237 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.77■■■□□ 2.2
RUNX1-204ENST00000399237 CFAP53Q96M91 514 aa28.77■■■□□ 2.2
RUNX1-204ENST00000399237 PTCD1O75127 700 aaKnown RBP28.76■■■□□ 2.19
RUNX1-204ENST00000399237 C4AP0C0L4 1744 aa28.76■■■□□ 2.19
RUNX1-204ENST00000399237 GNPATO15228 680 aa28.75■■■□□ 2.19
RUNX1-204ENST00000399237 PRKAR2BP31323 418 aa28.75■■■□□ 2.19
RUNX1-204ENST00000399237 SSFA2P28290 1259 aa28.74■■■□□ 2.19
RUNX1-204ENST00000399237 SLC39A6Q13433 755 aa28.73■■■□□ 2.19
RUNX1-204ENST00000399237 DDX10Q13206 875 aaKnown RBP28.71■■■□□ 2.19
RUNX1-204ENST00000399237 IL17REQ8NFR9 667 aa28.71■■■□□ 2.19
RUNX1-204ENST00000399237 CNTNAP4Q9C0A0 1308 aa28.7■■■□□ 2.19
RUNX1-204ENST00000399237 YBX3P16989 372 aaKnown RBP eCLIP28.7■■■□□ 2.183e-6■■■■□ 19.7
RUNX1-204ENST00000399237 U2AF1L5P0DN76 240 aaPredicted RBP28.69■■■□□ 2.18
RUNX1-204ENST00000399237 U2AF1Q01081 240 aaKnown RBP eCLIP28.69■■■□□ 2.182e-7■■■■□ 21.8
RUNX1-204ENST00000399237 GAS2L2Q8NHY3 880 aa28.68■■■□□ 2.18
RUNX1-204ENST00000399237 RC3H1Q5TC82 1133 aaKnown RBP28.67■■■□□ 2.18
RUNX1-204ENST00000399237 NUDCQ9Y266 331 aa28.67■■■□□ 2.18
RUNX1-204ENST00000399237 CD2APQ9Y5K6 639 aa28.67■■■□□ 2.18
RUNX1-204ENST00000399237 CEMIPQ8WUJ3 1361 aa28.66■■■□□ 2.18
RUNX1-204ENST00000399237 GNAT3A8MTJ3 354 aa28.66■■■□□ 2.18
RUNX1-204ENST00000399237 CRKLP46109 303 aaKnown RBP28.65■■■□□ 2.18
RUNX1-204ENST00000399237 DNAJC10Q8IXB1 793 aa28.65■■■□□ 2.18
RUNX1-204ENST00000399237 DLG5Q8TDM6 1919 aa28.65■■■□□ 2.18
RUNX1-204ENST00000399237 CHD4Q14839 1912 aa28.64■■■□□ 2.18
RUNX1-204ENST00000399237 GRIN3BO60391 1043 aa28.63■■■□□ 2.17
RUNX1-204ENST00000399237 RPS6KA4O75676 772 aa28.63■■■□□ 2.17
RUNX1-204ENST00000399237 FCHSD2O94868 740 aa28.63■■■□□ 2.17
RUNX1-204ENST00000399237 RTCBQ9Y3I0 505 aaKnown RBP28.63■■■□□ 2.17
RUNX1-204ENST00000399237 INTS5Q6P9B9 1019 aaKnown RBP28.62■■■□□ 2.17
RUNX1-204ENST00000399237 ARHGEF1Q92888 912 aaKnown RBP28.62■■■□□ 2.17
RUNX1-204ENST00000399237 TRAPPC3LQ5T215 181 aa28.59■■■□□ 2.17
RUNX1-204ENST00000399237 KIAA1551Q9HCM1 1747 aa28.58■■■□□ 2.17
RUNX1-204ENST00000399237 CYP19A1P11511 503 aaPredicted RBP28.57■■■□□ 2.16
RUNX1-204ENST00000399237 TEFQ10587 303 aa28.57■■■□□ 2.16
RUNX1-204ENST00000399237 GYS1P13807 737 aa28.56■■■□□ 2.16
RUNX1-204ENST00000399237 ADRA2BP18089 450 aa28.56■■■□□ 2.16
RUNX1-204ENST00000399237 RALBP1Q15311 655 aa28.56■■■□□ 2.16
RUNX1-204ENST00000399237 MCM10Q7L590 875 aa28.56■■■□□ 2.16
RUNX1-204ENST00000399237 PLEKHF1Q96S99 279 aa28.56■■■□□ 2.16
RUNX1-204ENST00000399237 WWC3Q9ULE0 1092 aa28.56■■■□□ 2.16
RUNX1-204ENST00000399237 KIF13BQ9NQT8 1826 aa28.55■■■□□ 2.16
RUNX1-204ENST00000399237 KCNQ3O43525 872 aa28.55■■■□□ 2.16
RUNX1-204ENST00000399237 DCTN1Q14203 1278 aa28.55■■■□□ 2.16
RUNX1-204ENST00000399237 ZNF496Q96IT1 587 aaPredicted RBP28.55■■■□□ 2.16
RUNX1-204ENST00000399237 SRP68Q9UHB9 627 aaKnown RBP28.55■■■□□ 2.16
RUNX1-204ENST00000399237 ZNF790Q6PG37 636 aa28.54■■■□□ 2.16
RUNX1-204ENST00000399237 CCDC87Q9NVE4 849 aa28.54■■■□□ 2.16
RUNX1-204ENST00000399237 C1QTNF8P60827 252 aa28.53■■■□□ 2.16
RUNX1-204ENST00000399237 ZBTB1Q9Y2K1 713 aa28.53■■■□□ 2.16
RUNX1-204ENST00000399237 HEG1Q9ULI3 1381 aa28.52■■■□□ 2.16
RUNX1-204ENST00000399237 SOS1Q07889 1333 aaPredicted RBP28.52■■■□□ 2.16
RUNX1-204ENST00000399237 MMP10P09238 476 aa28.52■■■□□ 2.16
RUNX1-204ENST00000399237 VSIG10Q8N0Z9 540 aa28.52■■■□□ 2.16
RUNX1-204ENST00000399237 USP42Q9H9J4 1324 aaKnown RBP28.51■■■□□ 2.15
RUNX1-204ENST00000399237 GIGYF1O75420 1035 aaPredicted RBP28.51■■■□□ 2.15
RUNX1-204ENST00000399237 RFC4P35249 363 aa28.5■■■□□ 2.15
RUNX1-204ENST00000399237 TTC5Q8N0Z6 440 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms