RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 ATP6V1AP38606 617 aa15.25■□□□□ 0.03
SRMP1-201ENST00000398959 AMIGO3Q86WK7 504 aa15.25■□□□□ 0.03
SRMP1-201ENST00000398959 C4AP0C0L4 1744 aa15.25■□□□□ 0.03
SRMP1-201ENST00000398959 N4BP2Q86UW6 1770 aaPredicted RBP15.24■□□□□ 0.03
SRMP1-201ENST00000398959 MYH14Q7Z406 1995 aaKnown RBP15.24■□□□□ 0.03
SRMP1-201ENST00000398959 SMIM5Q71RC9 77 aa15.24■□□□□ 0.03
SRMP1-201ENST00000398959 GNPATO15228 680 aa15.23■□□□□ 0.03
SRMP1-201ENST00000398959 HSP90AB1P08238 724 aaKnown RBP15.23■□□□□ 0.03
SRMP1-201ENST00000398959 ITPK1Q13572 414 aa15.23■□□□□ 0.03
SRMP1-201ENST00000398959 MORC1Q86VD1 984 aa15.23■□□□□ 0.03
SRMP1-201ENST00000398959 ATG3Q9NT62 314 aa15.23■□□□□ 0.03
SRMP1-201ENST00000398959 PLEKHO1Q53GL0 409 aaPredicted RBP15.22■□□□□ 0.03
SRMP1-201ENST00000398959 ERVV-2B6SEH9 535 aa15.21■□□□□ 0.03
SRMP1-201ENST00000398959 GIGYF1O75420 1035 aaPredicted RBP15.21■□□□□ 0.03
SRMP1-201ENST00000398959 C1QTNF8P60827 252 aa15.21■□□□□ 0.03
SRMP1-201ENST00000398959 ZNF530Q6P9A1 599 aaPredicted RBP15.21■□□□□ 0.03
SRMP1-201ENST00000398959 DCAF5Q96JK2 942 aa15.21■□□□□ 0.03
SRMP1-201ENST00000398959 RBM42Q9BTD8 480 aaKnown RBP15.21■□□□□ 0.03
SRMP1-201ENST00000398959 KNSTRNQ9Y448 316 aa15.21■□□□□ 0.03
SRMP1-201ENST00000398959 AMOTQ4VCS5 1084 aa15.2■□□□□ 0.02
SRMP1-201ENST00000398959 KDRP35968 1356 aa15.2■□□□□ 0.02
SRMP1-201ENST00000398959 TJP1Q07157 1748 aa15.2■□□□□ 0.02
SRMP1-201ENST00000398959 KIAA1551Q9HCM1 1747 aa15.2■□□□□ 0.02
SRMP1-201ENST00000398959 KDM6AO15550 1401 aaPredicted RBP15.19■□□□□ 0.02
SRMP1-201ENST00000398959 BRCA1P38398 1863 aaKnown RBP15.19■□□□□ 0.02
SRMP1-201ENST00000398959 CICQ96RK0 1608 aaPredicted RBP15.19■□□□□ 0.02
SRMP1-201ENST00000398959 SENP3-EIF4A1A0A087X0R7 540 aa15.19■□□□□ 0.02
SRMP1-201ENST00000398959 C1orf141Q5JVX7 400 aa15.19■□□□□ 0.02
SRMP1-201ENST00000398959 CABP4P57796 275 aa15.18■□□□□ 0.02
SRMP1-201ENST00000398959 AEBP1Q8IUX7 1158 aa15.18■□□□□ 0.02
SRMP1-201ENST00000398959 RTCBQ9Y3I0 505 aaKnown RBP15.18■□□□□ 0.02
SRMP1-201ENST00000398959 MTHFSP49914 203 aa15.17■□□□□ 0.02
SRMP1-201ENST00000398959 TRAPPC3LQ5T215 181 aa15.17■□□□□ 0.02
SRMP1-201ENST00000398959 WWC3Q9ULE0 1092 aa15.17■□□□□ 0.02
SRMP1-201ENST00000398959 SULT6B1Q6IMI4 303 aa15.16■□□□□ 0.02
SRMP1-201ENST00000398959 SLC4A9Q96Q91 983 aa15.16■□□□□ 0.02
SRMP1-201ENST00000398959 ATP10DQ9P241 1426 aa15.16■□□□□ 0.02
SRMP1-201ENST00000398959 ARFGEF1Q9Y6D6 1849 aa15.15■□□□□ 0.02
SRMP1-201ENST00000398959 MMP10P09238 476 aa15.15■□□□□ 0.02
SRMP1-201ENST00000398959 RC3H1Q5TC82 1133 aaKnown RBP15.15■□□□□ 0.02
SRMP1-201ENST00000398959 CNTNAP4Q9C0A0 1308 aa15.15■□□□□ 0.02
SRMP1-201ENST00000398959 ADRA2BP18089 450 aa15.14■□□□□ 0.01
SRMP1-201ENST00000398959 PTCD1O75127 700 aaKnown RBP15.13■□□□□ 0.01
SRMP1-201ENST00000398959 IL13P35225 146 aa15.13■□□□□ 0.01
SRMP1-201ENST00000398959 RFC4P35249 363 aa15.13■□□□□ 0.01
SRMP1-201ENST00000398959 NLGN1Q8N2Q7 840 aa15.13■□□□□ 0.01
SRMP1-201ENST00000398959 NFATC2IPQ8NCF5 419 aa15.13■□□□□ 0.01
SRMP1-201ENST00000398959 ARHGEF1Q92888 912 aaKnown RBP15.13■□□□□ 0.01
SRMP1-201ENST00000398959 KIF7Q2M1P5 1343 aa15.13■□□□□ 0.01
SRMP1-201ENST00000398959 RPS6KA4O75676 772 aa15.12■□□□□ 0.01
SRMP1-201ENST00000398959 AMER1Q5JTC6 1135 aaPredicted RBP15.12■□□□□ 0.01
SRMP1-201ENST00000398959 PXDNLA1KZ92 1463 aa15.12■□□□□ 0.01
SRMP1-201ENST00000398959 AFDNP55196 1824 aaKnown RBP15.11■□□□□ 0.01
SRMP1-201ENST00000398959 GPBP1L1Q9HC44 474 aaPredicted RBP15.11■□□□□ 0.01
SRMP1-201ENST00000398959 ADAMTS7Q9UKP4 1686 aa15.11■□□□□ 0.01
SRMP1-201ENST00000398959 UBR2Q8IWV8 1755 aa15.11■□□□□ 0.01
SRMP1-201ENST00000398959 ADCY9O60503 1353 aa15.11■□□□□ 0.01
SRMP1-201ENST00000398959 C10orf71Q711Q0 1435 aa15.1■□□□□ 0.01
SRMP1-201ENST00000398959 GYS1P13807 737 aa15.1■□□□□ 0.01
SRMP1-201ENST00000398959 AKAP4Q5JQC9 854 aa15.1■□□□□ 0.01
SRMP1-201ENST00000398959 ZNF526Q8TF50 670 aaPredicted RBP15.1■□□□□ 0.01
SRMP1-201ENST00000398959 CCDC87Q9NVE4 849 aa15.1■□□□□ 0.01
SRMP1-201ENST00000398959 PARP3Q9Y6F1 533 aa15.1■□□□□ 0.01
SRMP1-201ENST00000398959 CRKLP46109 303 aaKnown RBP15.09■□□□□ 0.01
SRMP1-201ENST00000398959 TGFB2P61812 414 aa15.09■□□□□ 0.01
SRMP1-201ENST00000398959 MRC1P22897 1456 aa15.08■□□□□ 0.01
SRMP1-201ENST00000398959 HMOX1P09601 288 aa15.08■□□□□ 0
SRMP1-201ENST00000398959 CC2D1BQ5T0F9 858 aaKnown RBP15.08■□□□□ 0
SRMP1-201ENST00000398959 SIPA1L3O60292 1781 aaPredicted RBP15.08■□□□□ 0
SRMP1-201ENST00000398959 SBF1O95248 1867 aa15.08■□□□□ 0
SRMP1-201ENST00000398959 A0A0G2JLW4 131 aa15.07■□□□□ 0
SRMP1-201ENST00000398959 SLC52A2Q9HAB3 445 aa15.07■□□□□ 0
SRMP1-201ENST00000398959 BCS1LQ9Y276 419 aa15.07■□□□□ 0
SRMP1-201ENST00000398959 CCDC88AQ3V6T2 1871 aa15.06■□□□□ 0
SRMP1-201ENST00000398959 DIAPH1O60610 1272 aaKnown RBP15.06■□□□□ 0
SRMP1-201ENST00000398959 LGR6Q9HBX8 967 aa15.06■□□□□ 0
SRMP1-201ENST00000398959 RNMTO43148 476 aaKnown RBP15.05■□□□□ -0
SRMP1-201ENST00000398959 SRP68Q9UHB9 627 aaKnown RBP15.05■□□□□ -0
SRMP1-201ENST00000398959 USP42Q9H9J4 1324 aaKnown RBP15.05■□□□□ -0
SRMP1-201ENST00000398959 KCPQ6ZWJ8 1503 aa15.05■□□□□ -0
SRMP1-201ENST00000398959 DLEC1Q9Y238 1755 aa15.05■□□□□ -0
SRMP1-201ENST00000398959 CEP350Q5VT06 3117 aa15.04■□□□□ -0
SRMP1-201ENST00000398959 PER1O15534 1290 aaPredicted RBP15.04■□□□□ -0
SRMP1-201ENST00000398959 DPEP1P16444 411 aa15.04■□□□□ -0
SRMP1-201ENST00000398959 CNGB1Q14028 1251 aaPredicted RBP15.04■□□□□ -0
SRMP1-201ENST00000398959 ZPR1O75312 459 aa15.03■□□□□ -0
SRMP1-201ENST00000398959 FCHSD2O94868 740 aa15.03■□□□□ -0
SRMP1-201ENST00000398959 SLC39A6Q13433 755 aa15.03■□□□□ -0
SRMP1-201ENST00000398959 FKBP8Q14318 412 aa15.03■□□□□ -0
SRMP1-201ENST00000398959 MTHFSDQ2M296 383 aaKnown RBP15.03■□□□□ -0
SRMP1-201ENST00000398959 INTS5Q6P9B9 1019 aaKnown RBP15.03■□□□□ -0
SRMP1-201ENST00000398959 ARHGAP27Q6ZUM4 889 aa15.03■□□□□ -0
SRMP1-201ENST00000398959 DNAJC10Q8IXB1 793 aa15.03■□□□□ -0
SRMP1-201ENST00000398959 NRXN2Q9P2S2 1712 aa15.03■□□□□ -0
SRMP1-201ENST00000398959 COL3A1P02461 1466 aaPredicted RBP15.01□□□□□ -0.01
SRMP1-201ENST00000398959 CACNA1SQ13698 1873 aa15.01□□□□□ -0.01
SRMP1-201ENST00000398959 COL15A1P39059 1388 aa15□□□□□ -0.01
SRMP1-201ENST00000398959 NPC1L1Q9UHC9 1359 aa15□□□□□ -0.01
SRMP1-201ENST00000398959 SOS1Q07889 1333 aaPredicted RBP15□□□□□ -0.01
SRMP1-201ENST00000398959 U2SURPO15042 1029 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms