RNA–Protein interactions for RNA: ENST00000398842.7

CDH23-206, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 1,759 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-206ENST00000398842 ZBTB40Q9NUA8 1239 aa29.49■■■□□ 2.31
CDH23-206ENST00000398842 PTPRCP08575 1304 aa29.48■■■□□ 2.31
CDH23-206ENST00000398842 TOM1L2Q6ZVM7 507 aa29.48■■■□□ 2.31
CDH23-206ENST00000398842 SLC4A2P04920 1241 aa29.47■■■□□ 2.31
CDH23-206ENST00000398842 EIF4A1P60842 406 aaKnown RBP29.47■■■□□ 2.31
CDH23-206ENST00000398842 KDM6AO15550 1401 aaPredicted RBP29.47■■■□□ 2.31
CDH23-206ENST00000398842 BTBD11A6QL63 1104 aa29.47■■■□□ 2.31
CDH23-206ENST00000398842 IFNL2Q8IZJ0 200 aa29.46■■■□□ 2.31
CDH23-206ENST00000398842 CARD10Q9BWT7 1032 aa29.46■■■□□ 2.31
CDH23-206ENST00000398842 COL14A1Q05707 1796 aaKnown RBP29.45■■■□□ 2.31
CDH23-206ENST00000398842 CCDC30Q5VVM6 783 aa29.45■■■□□ 2.31
CDH23-206ENST00000398842 KCNQ3O43525 872 aa29.44■■■□□ 2.3
CDH23-206ENST00000398842 ZBTB7BO15156 539 aaPredicted RBP29.43■■■□□ 2.3
CDH23-206ENST00000398842 CYP27B1O15528 508 aa29.43■■■□□ 2.3
CDH23-206ENST00000398842 HOXB7P09629 217 aa29.42■■■□□ 2.3
CDH23-206ENST00000398842 STK31Q9BXU1 1019 aa29.42■■■□□ 2.3
CDH23-206ENST00000398842 LARP1Q6PKG0 1096 aaKnown RBP29.41■■■□□ 2.3
CDH23-206ENST00000398842 SKAP1Q86WV1 359 aa29.41■■■□□ 2.3
CDH23-206ENST00000398842 CHMP4BQ9H444 224 aaKnown RBP29.41■■■□□ 2.3
CDH23-206ENST00000398842 EVA1CP58658 441 aa29.41■■■□□ 2.3
CDH23-206ENST00000398842 INTS3Q68E01 1043 aaKnown RBP29.41■■■□□ 2.3
CDH23-206ENST00000398842 G2E3Q7L622 706 aa29.41■■■□□ 2.3
CDH23-206ENST00000398842 RWDD1Q9H446 243 aaPredicted RBP29.41■■■□□ 2.3
CDH23-206ENST00000398842 STRN4Q9NRL3 753 aa29.41■■■□□ 2.3
CDH23-206ENST00000398842 MRC1P22897 1456 aa29.4■■■□□ 2.3
CDH23-206ENST00000398842 HSPA1LP34931 641 aa29.39■■■□□ 2.3
CDH23-206ENST00000398842 HEG1Q9ULI3 1381 aa29.39■■■□□ 2.29
CDH23-206ENST00000398842 SLC52A2Q9HAB3 445 aa29.39■■■□□ 2.29
CDH23-206ENST00000398842 DCAF5Q96JK2 942 aa29.38■■■□□ 2.29
CDH23-206ENST00000398842 HSP90AB1P08238 724 aaKnown RBP29.37■■■□□ 2.29
CDH23-206ENST00000398842 HDAC1Q13547 482 aaPredicted RBP29.37■■■□□ 2.29
CDH23-206ENST00000398842 HDGFL1Q5TGJ6 251 aa29.37■■■□□ 2.29
CDH23-206ENST00000398842 RBM19Q9Y4C8 960 aaKnown RBP29.37■■■□□ 2.29
CDH23-206ENST00000398842 SHANK3Q9BYB0 1731 aa29.37■■■□□ 2.29
CDH23-206ENST00000398842 IL2RBP14784 551 aa29.36■■■□□ 2.29
CDH23-206ENST00000398842 BTG4Q9NY30 223 aa29.36■■■□□ 2.29
CDH23-206ENST00000398842 ZCRB1Q8TBF4 217 aaKnown RBP29.35■■■□□ 2.29
CDH23-206ENST00000398842 NECTIN2Q92692 538 aa29.35■■■□□ 2.29
CDH23-206ENST00000398842 NUTM2BA6NNL0 878 aaPredicted RBP29.34■■■□□ 2.29
CDH23-206ENST00000398842 NUTM2EB1AL46 878 aaPredicted RBP29.34■■■□□ 2.29
CDH23-206ENST00000398842 NUTM2AQ8IVF1 878 aaPredicted RBP29.34■■■□□ 2.29
CDH23-206ENST00000398842 CHMP4AQ9BY43 222 aa29.34■■■□□ 2.29
CDH23-206ENST00000398842 PCDH11XQ9BZA7 1347 aa29.34■■■□□ 2.29
CDH23-206ENST00000398842 PCDH11YQ9BZA8 1340 aa29.34■■■□□ 2.29
CDH23-206ENST00000398842 FLIIQ13045 1269 aa29.34■■■□□ 2.29
CDH23-206ENST00000398842 NFATC2IPQ8NCF5 419 aa29.31■■■□□ 2.28
CDH23-206ENST00000398842 JCADQ9P266 1359 aa29.31■■■□□ 2.28
CDH23-206ENST00000398842 GIGYF1O75420 1035 aaPredicted RBP29.31■■■□□ 2.28
CDH23-206ENST00000398842 ADAMTS2O95450 1211 aa29.3■■■□□ 2.28
CDH23-206ENST00000398842 N4BP2Q86UW6 1770 aaPredicted RBP29.3■■■□□ 2.28
CDH23-206ENST00000398842 EIF2S2P20042 333 aaKnown RBP29.29■■■□□ 2.28
CDH23-206ENST00000398842 ZNF790Q6PG37 636 aa29.29■■■□□ 2.28
CDH23-206ENST00000398842 PLCH1Q4KWH8 1693 aa29.29■■■□□ 2.28
CDH23-206ENST00000398842 NKX1-1Q15270 411 aaPredicted RBP29.28■■■□□ 2.28
CDH23-206ENST00000398842 F6X3S4 739 aa29.27■■■□□ 2.28
CDH23-206ENST00000398842 CCT4P50991 539 aaKnown RBP29.26■■■□□ 2.28
CDH23-206ENST00000398842 SLC39A6Q13433 755 aa29.26■■■□□ 2.28
CDH23-206ENST00000398842 FKBP5Q13451 457 aaPredicted RBP29.26■■■□□ 2.28
CDH23-206ENST00000398842 C1orf115Q9H7X2 142 aa29.26■■■□□ 2.27
CDH23-206ENST00000398842 CHPF2Q9P2E5 772 aa29.26■■■□□ 2.27
CDH23-206ENST00000398842 C5P01031 1676 aa29.25■■■□□ 2.27
CDH23-206ENST00000398842 SMC5Q8IY18 1101 aa29.25■■■□□ 2.27
CDH23-206ENST00000398842 PXDNLA1KZ92 1463 aa29.25■■■□□ 2.27
CDH23-206ENST00000398842 DISP2A7MBM2 1401 aa29.24■■■□□ 2.27
CDH23-206ENST00000398842 PHAXQ9H814 394 aaKnown RBP29.24■■■□□ 2.27
CDH23-206ENST00000398842 PDZRN3Q9UPQ7 1066 aa29.24■■■□□ 2.27
CDH23-206ENST00000398842 NRAPQ86VF7 1730 aa29.24■■■□□ 2.27
CDH23-206ENST00000398842 RGS3P49796 1198 aa29.24■■■□□ 2.27
CDH23-206ENST00000398842 CABP4P57796 275 aa29.23■■■□□ 2.27
CDH23-206ENST00000398842 USP35Q9P2H5 1018 aa29.23■■■□□ 2.27
CDH23-206ENST00000398842 WNK3Q9BYP7 1800 aa29.22■■■□□ 2.27
CDH23-206ENST00000398842 PRAMEF22A3QJZ6 481 aa29.22■■■□□ 2.27
CDH23-206ENST00000398842 SLC4A10Q6U841 1118 aa29.22■■■□□ 2.27
CDH23-206ENST00000398842 ERVV-2B6SEH9 535 aa29.21■■■□□ 2.27
CDH23-206ENST00000398842 DBF4Q9UBU7 674 aaPredicted RBP29.21■■■□□ 2.27
CDH23-206ENST00000398842 SIRT2Q8IXJ6 389 aa29.21■■■□□ 2.27
CDH23-206ENST00000398842 PDE4AP27815 886 aa29.19■■■□□ 2.26
CDH23-206ENST00000398842 DDX54Q8TDD1 881 aaKnown RBP29.19■■■□□ 2.26
CDH23-206ENST00000398842 MEIS3Q99687 375 aa29.19■■■□□ 2.26
CDH23-206ENST00000398842 GLI3P10071 1580 aa29.18■■■□□ 2.26
CDH23-206ENST00000398842 ZNF496Q96IT1 587 aaPredicted RBP29.18■■■□□ 2.26
CDH23-206ENST00000398842 TOGARAM1Q9Y4F4 1720 aa29.18■■■□□ 2.26
CDH23-206ENST00000398842 ATP10DQ9P241 1426 aa29.18■■■□□ 2.26
CDH23-206ENST00000398842 BACH2Q9BYV9 841 aa29.18■■■□□ 2.26
CDH23-206ENST00000398842 PAPPAQ13219 1627 aa29.18■■■□□ 2.26
CDH23-206ENST00000398842 TTC5Q8N0Z6 440 aa29.17■■■□□ 2.26
CDH23-206ENST00000398842 SPATA31A6Q5VVP1 1343 aa29.17■■■□□ 2.26
CDH23-206ENST00000398842 UBR2Q8IWV8 1755 aa29.17■■■□□ 2.26
CDH23-206ENST00000398842 NWD2Q9ULI1 1742 aa29.16■■■□□ 2.26
CDH23-206ENST00000398842 ANXA1P04083 346 aa29.16■■■□□ 2.26
CDH23-206ENST00000398842 PROSER3Q2NL68 480 aa29.14■■■□□ 2.26
CDH23-206ENST00000398842 FMNL2Q96PY5 1086 aa29.14■■■□□ 2.26
CDH23-206ENST00000398842 ANKRD44Q8N8A2 993 aa29.13■■■□□ 2.25
CDH23-206ENST00000398842 DDX21Q9NR30 783 aaKnown RBP eCLIP29.13■■■□□ 2.25
CDH23-206ENST00000398842 LRP6O75581 1613 aa29.13■■■□□ 2.25
CDH23-206ENST00000398842 LAMB4A4D0S4 1761 aa29.13■■■□□ 2.25
CDH23-206ENST00000398842 SNRPA1P09661 255 aaKnown RBP29.13■■■□□ 2.25
CDH23-206ENST00000398842 PDIA6Q15084 440 aa29.13■■■□□ 2.25
CDH23-206ENST00000398842 RPAP2Q8IXW5 612 aaPredicted RBP29.13■■■□□ 2.25
CDH23-206ENST00000398842 GCC1Q96CN9 775 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms