RNA–Protein interactions for RNA: ENST00000398486.2

KRT40-202, Transcript of keratin 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT40, Length 1,772 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40-202ENST00000398486 ONECUT3O60422 494 aaPredicted RBP16.87■□□□□ 0.29
KRT40-202ENST00000398486 HSP90AB1P08238 724 aaKnown RBP16.87■□□□□ 0.29
KRT40-202ENST00000398486 SLC52A2Q9HAB3 445 aa16.87■□□□□ 0.29
KRT40-202ENST00000398486 TEFQ10587 303 aa16.87■□□□□ 0.29
KRT40-202ENST00000398486 TAF7Q15545 349 aaPredicted RBP16.87■□□□□ 0.29
KRT40-202ENST00000398486 EXOSC9Q06265 439 aaKnown RBP16.86■□□□□ 0.29
KRT40-202ENST00000398486 KRT24Q2M2I5 525 aa16.86■□□□□ 0.29
KRT40-202ENST00000398486 TSPYL4Q9UJ04 414 aa16.86■□□□□ 0.29
KRT40-202ENST00000398486 C5P01031 1676 aa16.85■□□□□ 0.29
KRT40-202ENST00000398486 ZNF772Q68DY9 489 aaPredicted RBP16.85■□□□□ 0.29
KRT40-202ENST00000398486 SBF2Q86WG5 1849 aa16.85■□□□□ 0.29
KRT40-202ENST00000398486 TSPYL6Q8N831 410 aa16.84■□□□□ 0.29
KRT40-202ENST00000398486 KCNQ3O43525 872 aa16.84■□□□□ 0.29
KRT40-202ENST00000398486 ILDR1Q86SU0 546 aaPredicted RBP16.84■□□□□ 0.29
KRT40-202ENST00000398486 NFATC2IPQ8NCF5 419 aa16.84■□□□□ 0.29
KRT40-202ENST00000398486 C8orf58Q8NAV2 365 aa16.83■□□□□ 0.28
KRT40-202ENST00000398486 BABAM1Q9NWV8 329 aa16.83■□□□□ 0.28
KRT40-202ENST00000398486 A0A0G2JS52 829 aa16.82■□□□□ 0.28
KRT40-202ENST00000398486 ERVV-2B6SEH9 535 aa16.82■□□□□ 0.28
KRT40-202ENST00000398486 MYT1Q01538 1121 aa16.82■□□□□ 0.28
KRT40-202ENST00000398486 SEPT12Q8IYM1 358 aa16.82■□□□□ 0.28
KRT40-202ENST00000398486 KCPQ6ZWJ8 1503 aa16.82■□□□□ 0.28
KRT40-202ENST00000398486 NHSQ6T4R5 1651 aa16.82■□□□□ 0.28
KRT40-202ENST00000398486 BTBD11A6QL63 1104 aa16.82■□□□□ 0.28
KRT40-202ENST00000398486 RCAN3Q9UKA8 241 aa16.82■□□□□ 0.28
KRT40-202ENST00000398486 BCL9O00512 1426 aa16.81■□□□□ 0.28
KRT40-202ENST00000398486 SLC39A6Q13433 755 aa16.81■□□□□ 0.28
KRT40-202ENST00000398486 RGS12O14924 1447 aa16.81■□□□□ 0.28
KRT40-202ENST00000398486 HEG1Q9ULI3 1381 aa16.8■□□□□ 0.28
KRT40-202ENST00000398486 RBM6P78332 1123 aaKnown RBP16.8■□□□□ 0.28
KRT40-202ENST00000398486 POTEAQ6S8J7 498 aa16.8■□□□□ 0.28
KRT40-202ENST00000398486 CABP4P57796 275 aa16.79■□□□□ 0.28
KRT40-202ENST00000398486 LAMB4A4D0S4 1761 aa16.79■□□□□ 0.28
KRT40-202ENST00000398486 ELL2O00472 640 aaPredicted RBP16.79■□□□□ 0.28
KRT40-202ENST00000398486 VAMP4O75379 141 aa16.79■□□□□ 0.28
KRT40-202ENST00000398486 EIF4A1P60842 406 aaKnown RBP16.79■□□□□ 0.28
KRT40-202ENST00000398486 FAM182BQ5T319 152 aa16.79■□□□□ 0.28
KRT40-202ENST00000398486 ZNF790Q6PG37 636 aa16.79■□□□□ 0.28
KRT40-202ENST00000398486 BTAF1O14981 1849 aa16.79■□□□□ 0.28
KRT40-202ENST00000398486 RNF123Q5XPI4 1314 aa16.78■□□□□ 0.28
KRT40-202ENST00000398486 NEFLP07196 543 aa16.78■□□□□ 0.28
KRT40-202ENST00000398486 RARSP54136 660 aaKnown RBP16.78■□□□□ 0.28
KRT40-202ENST00000398486 TWISTNBQ3B726 338 aaPredicted RBP16.78■□□□□ 0.28
KRT40-202ENST00000398486 PIGBQ92521 554 aa16.78■□□□□ 0.28
KRT40-202ENST00000398486 SUPT16HQ9Y5B9 1047 aaKnown RBP16.78■□□□□ 0.28
KRT40-202ENST00000398486 CT47B1P0C2W7 299 aaPredicted RBP16.77■□□□□ 0.28
KRT40-202ENST00000398486 TMOD3Q9NYL9 352 aa16.77■□□□□ 0.28
KRT40-202ENST00000398486 BCAR3O75815 825 aa16.77■□□□□ 0.27
KRT40-202ENST00000398486 ACSBG1Q96GR2 724 aa16.77■□□□□ 0.27
KRT40-202ENST00000398486 CACNA1FO60840 1977 aa16.76■□□□□ 0.27
KRT40-202ENST00000398486 PRIM1P49642 420 aaKnown RBP16.76■□□□□ 0.27
KRT40-202ENST00000398486 ZNF496Q96IT1 587 aaPredicted RBP16.75■□□□□ 0.27
KRT40-202ENST00000398486 BCL2L13Q9BXK5 485 aa16.75■□□□□ 0.27
KRT40-202ENST00000398486 TJP1Q07157 1748 aa16.75■□□□□ 0.27
KRT40-202ENST00000398486 PRAMEF22A3QJZ6 481 aa16.74■□□□□ 0.27
KRT40-202ENST00000398486 KCNQ2O43526 872 aa16.74■□□□□ 0.27
KRT40-202ENST00000398486 RXRBP28702 533 aa16.74■□□□□ 0.27
KRT40-202ENST00000398486 PTF1AQ7RTS3 328 aa16.74■□□□□ 0.27
KRT40-202ENST00000398486 SSH1Q8WYL5 1049 aa16.74■□□□□ 0.27
KRT40-202ENST00000398486 ASAP1Q9ULH1 1129 aa16.74■□□□□ 0.27
KRT40-202ENST00000398486 SYTL4Q96C24 671 aaPredicted RBP16.74■□□□□ 0.27
KRT40-202ENST00000398486 CICQ96RK0 1608 aaPredicted RBP16.73■□□□□ 0.27
KRT40-202ENST00000398486 ATG3Q9NT62 314 aa16.73■□□□□ 0.27
KRT40-202ENST00000398486 GIGYF1O75420 1035 aaPredicted RBP16.72■□□□□ 0.27
KRT40-202ENST00000398486 RRP1P56182 461 aaKnown RBP16.72■□□□□ 0.27
KRT40-202ENST00000398486 TCERG1O14776 1098 aaKnown RBP16.72■□□□□ 0.27
KRT40-202ENST00000398486 KRT27Q7Z3Y8 459 aa16.72■□□□□ 0.27
KRT40-202ENST00000398486 TTC5Q8N0Z6 440 aa16.72■□□□□ 0.27
KRT40-202ENST00000398486 ZNF428Q96B54 188 aa16.72■□□□□ 0.27
KRT40-202ENST00000398486 PLIN1O60240 522 aa16.71■□□□□ 0.27
KRT40-202ENST00000398486 HOXB7P09629 217 aa16.71■□□□□ 0.27
KRT40-202ENST00000398486 ALDH1L2Q3SY69 923 aa16.71■□□□□ 0.27
KRT40-202ENST00000398486 SOS1Q07889 1333 aaPredicted RBP16.71■□□□□ 0.26
KRT40-202ENST00000398486 LY75O60449 1722 aa16.7■□□□□ 0.26
KRT40-202ENST00000398486 SMC4Q9NTJ3 1288 aa16.7■□□□□ 0.26
KRT40-202ENST00000398486 ZNF831Q5JPB2 1677 aa16.7■□□□□ 0.26
KRT40-202ENST00000398486 FMNL2Q96PY5 1086 aa16.69■□□□□ 0.26
KRT40-202ENST00000398486 SLC4A9Q96Q91 983 aa16.69■□□□□ 0.26
KRT40-202ENST00000398486 COL5A3P25940 1745 aaPredicted RBP16.69■□□□□ 0.26
KRT40-202ENST00000398486 PTCD1O75127 700 aaKnown RBP16.69■□□□□ 0.26
KRT40-202ENST00000398486 MRPL50Q8N5N7 158 aaKnown RBP16.69■□□□□ 0.26
KRT40-202ENST00000398486 TNS1Q9HBL0 1735 aaKnown RBP16.68■□□□□ 0.26
KRT40-202ENST00000398486 BRPF1P55201 1214 aaPredicted RBP16.68■□□□□ 0.26
KRT40-202ENST00000398486 NECTIN2Q92692 538 aa16.68■□□□□ 0.26
KRT40-202ENST00000398486 FKBP8Q14318 412 aa16.67■□□□□ 0.26
KRT40-202ENST00000398486 HDGFL1Q5TGJ6 251 aa16.67■□□□□ 0.26
KRT40-202ENST00000398486 PALLDQ8WX93 1383 aa16.67■□□□□ 0.26
KRT40-202ENST00000398486 TNNQ9UQP3 1299 aa16.66■□□□□ 0.26
KRT40-202ENST00000398486 SNRPA1P09661 255 aaKnown RBP16.66■□□□□ 0.26
KRT40-202ENST00000398486 IRX6P78412 446 aaPredicted RBP16.66■□□□□ 0.26
KRT40-202ENST00000398486 C20orf194Q5TEA3 1177 aa16.66■□□□□ 0.26
KRT40-202ENST00000398486 USP16Q9Y5T5 823 aa16.66■□□□□ 0.26
KRT40-202ENST00000398486 MYH14Q7Z406 1995 aaKnown RBP16.66■□□□□ 0.26
KRT40-202ENST00000398486 RREB1Q92766 1687 aa16.65■□□□□ 0.26
KRT40-202ENST00000398486 TAF1LQ8IZX4 1826 aa16.65■□□□□ 0.26
KRT40-202ENST00000398486 EIF2S2P20042 333 aaKnown RBP16.65■□□□□ 0.26
KRT40-202ENST00000398486 CCDC30Q5VVM6 783 aa16.65■□□□□ 0.26
KRT40-202ENST00000398486 CHPF2Q9P2E5 772 aa16.65■□□□□ 0.26
KRT40-202ENST00000398486 N4BP2Q86UW6 1770 aaPredicted RBP16.65■□□□□ 0.26
KRT40-202ENST00000398486 PROSER3Q2NL68 480 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms