RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 GUCY1B3Q02153 619 aa14.32□□□□□ -0.12
SMU1-201ENST00000397149 JAKMIP1Q96N16 626 aaKnown RBP14.32□□□□□ -0.12
SMU1-201ENST00000397149 VGFO15240 615 aaPredicted RBP14.32□□□□□ -0.12
SMU1-201ENST00000397149 PAFAH1B1P43034 410 aa14.32□□□□□ -0.12
SMU1-201ENST00000397149 FLIIQ13045 1269 aa14.32□□□□□ -0.12
SMU1-201ENST00000397149 SAMM50Q9Y512 469 aa14.32□□□□□ -0.12
SMU1-201ENST00000397149 MICALCLQ6ZW33 695 aa14.31□□□□□ -0.12
SMU1-201ENST00000397149 TAOK3Q9H2K8 898 aa14.31□□□□□ -0.12
SMU1-201ENST00000397149 CDKL5O76039 1030 aa14.31□□□□□ -0.12
SMU1-201ENST00000397149 SLU7O95391 586 aaKnown RBP14.31□□□□□ -0.12
SMU1-201ENST00000397149 GNAI3P08754 354 aa14.31□□□□□ -0.12
SMU1-201ENST00000397149 PRKCSHP14314 528 aaPredicted RBP14.31□□□□□ -0.12
SMU1-201ENST00000397149 MRVI1Q9Y6F6 885 aa14.31□□□□□ -0.12
SMU1-201ENST00000397149 ANKRD1Q15327 319 aa14.31□□□□□ -0.12
SMU1-201ENST00000397149 TOM1L2Q6ZVM7 507 aa14.31□□□□□ -0.12
SMU1-201ENST00000397149 AACSQ86V21 672 aa14.31□□□□□ -0.12
SMU1-201ENST00000397149 SYNCQ9H7C4 482 aa14.31□□□□□ -0.12
SMU1-201ENST00000397149 CGNQ9P2M7 1197 aaKnown RBP14.31□□□□□ -0.12
SMU1-201ENST00000397149 CTR9Q6PD62 1173 aa14.31□□□□□ -0.12
SMU1-201ENST00000397149 GBP3Q9H0R5 595 aa14.31□□□□□ -0.12
SMU1-201ENST00000397149 MAP7D1Q3KQU3 841 aa14.31□□□□□ -0.12
SMU1-201ENST00000397149 MYO1BO43795 1136 aa14.3□□□□□ -0.12
SMU1-201ENST00000397149 ACTN2P35609 894 aa14.3□□□□□ -0.12
SMU1-201ENST00000397149 PDRG1Q9NUG6 133 aa14.3□□□□□ -0.12
SMU1-201ENST00000397149 BLOC1S2Q6QNY1 142 aa14.3□□□□□ -0.12
SMU1-201ENST00000397149 GJC1P36383 396 aa14.3□□□□□ -0.12
SMU1-201ENST00000397149 NAA25Q14CX7 972 aa14.3□□□□□ -0.12
SMU1-201ENST00000397149 GNAI2P04899 355 aa14.3□□□□□ -0.12
SMU1-201ENST00000397149 SATB1Q01826 763 aa14.3□□□□□ -0.12
SMU1-201ENST00000397149 ODF2LQ9ULJ1 636 aa14.3□□□□□ -0.12
SMU1-201ENST00000397149 MYO15BQ96JP2 1530 aa14.3□□□□□ -0.12
SMU1-201ENST00000397149 SYCP3Q8IZU3 236 aa14.3□□□□□ -0.12
SMU1-201ENST00000397149 FERMT1Q9BQL6 677 aa14.29□□□□□ -0.12
SMU1-201ENST00000397149 SPECC1LQ69YQ0 1117 aa14.29□□□□□ -0.12
SMU1-201ENST00000397149 PTPN14Q15678 1187 aa14.29□□□□□ -0.12
SMU1-201ENST00000397149 ZSCAN25Q6NSZ9 544 aa14.29□□□□□ -0.12
SMU1-201ENST00000397149 BICD1Q96G01 975 aa14.29□□□□□ -0.12
SMU1-201ENST00000397149 FERMT3Q86UX7 667 aa14.29□□□□□ -0.12
SMU1-201ENST00000397149 CCDC144CPQ8IYA2 1237 aa14.29□□□□□ -0.12
SMU1-201ENST00000397149 SMC1BQ8NDV3 1235 aa14.29□□□□□ -0.12
SMU1-201ENST00000397149 CUL5Q93034 780 aa14.29□□□□□ -0.12
SMU1-201ENST00000397149 ZSWIM4Q9H7M6 989 aa14.29□□□□□ -0.12
SMU1-201ENST00000397149 CABP2Q9NPB3 220 aa14.29□□□□□ -0.12
SMU1-201ENST00000397149 SEPT6Q14141 434 aa14.29□□□□□ -0.12
SMU1-201ENST00000397149 SMARCC1Q92922 1105 aaPredicted RBP14.29□□□□□ -0.12
SMU1-201ENST00000397149 PPP1R9BQ96SB3 815 aa14.29□□□□□ -0.12
SMU1-201ENST00000397149 WDR33Q9C0J8 1336 aaKnown RBP14.29□□□□□ -0.12
SMU1-201ENST00000397149 MCM2P49736 904 aa14.28□□□□□ -0.12
SMU1-201ENST00000397149 AIDAQ96BJ3 306 aa14.28□□□□□ -0.12
SMU1-201ENST00000397149 IQCGQ9H095 443 aaKnown RBP14.28□□□□□ -0.12
SMU1-201ENST00000397149 VAT1LQ9HCJ6 419 aa14.28□□□□□ -0.12
SMU1-201ENST00000397149 ANAPC4Q9UJX5 808 aa14.28□□□□□ -0.12
SMU1-201ENST00000397149 CEP131Q9UPN4 1083 aa14.28□□□□□ -0.12
SMU1-201ENST00000397149 ERCC3P19447 782 aa14.28□□□□□ -0.12
SMU1-201ENST00000397149 RNF216Q9NWF9 866 aaPredicted RBP14.28□□□□□ -0.12
SMU1-201ENST00000397149 PFDN4Q9NQP4 134 aa14.27□□□□□ -0.12
SMU1-201ENST00000397149 MNAT1P51948 309 aa14.27□□□□□ -0.12
SMU1-201ENST00000397149 USO1O60763 962 aaKnown RBP14.27□□□□□ -0.12
SMU1-201ENST00000397149 NOL3O60936 208 aaKnown RBP14.27□□□□□ -0.12
SMU1-201ENST00000397149 ATP2B3Q16720 1220 aa14.27□□□□□ -0.13
SMU1-201ENST00000397149 ISM2Q6H9L7 571 aa14.27□□□□□ -0.13
SMU1-201ENST00000397149 SREK1Q8WXA9 508 aaKnown RBP14.27□□□□□ -0.13
SMU1-201ENST00000397149 ANKIB1Q9P2G1 1089 aa14.27□□□□□ -0.13
SMU1-201ENST00000397149 SLC4A2P04920 1241 aa14.27□□□□□ -0.13
SMU1-201ENST00000397149 PLEKHO1Q53GL0 409 aaPredicted RBP14.27□□□□□ -0.13
SMU1-201ENST00000397149 TOP1P11387 765 aaKnown RBP14.27□□□□□ -0.13
SMU1-201ENST00000397149 MTIF2P46199 727 aaKnown RBP14.26□□□□□ -0.13
SMU1-201ENST00000397149 GRPEL1Q9HAV7 217 aa14.26□□□□□ -0.13
SMU1-201ENST00000397149 TATP17735 454 aaPredicted RBP14.26□□□□□ -0.13
SMU1-201ENST00000397149 SFPQP23246 707 aaKnown RBP eCLIP14.26□□□□□ -0.13
SMU1-201ENST00000397149 HDGFL1Q5TGJ6 251 aa14.26□□□□□ -0.13
SMU1-201ENST00000397149 SIRT1Q96EB6 747 aa14.26□□□□□ -0.13
SMU1-201ENST00000397149 FEZ2Q9UHY8 353 aaPredicted RBP14.26□□□□□ -0.13
SMU1-201ENST00000397149 BCAR3O75815 825 aa14.26□□□□□ -0.13
SMU1-201ENST00000397149 RAB3GAP2Q9H2M9 1393 aa14.26□□□□□ -0.13
SMU1-201ENST00000397149 RANBP6O60518 1105 aaKnown RBP14.25□□□□□ -0.13
SMU1-201ENST00000397149 PDZRN3Q9UPQ7 1066 aa14.25□□□□□ -0.13
SMU1-201ENST00000397149 DYNC1I1O14576 645 aa14.25□□□□□ -0.13
SMU1-201ENST00000397149 FAM184BQ9ULE4 1060 aa14.25□□□□□ -0.13
SMU1-201ENST00000397149 IGHMBP2P38935 993 aaKnown RBP14.25□□□□□ -0.13
SMU1-201ENST00000397149 CCDC40Q4G0X9 1142 aa14.25□□□□□ -0.13
SMU1-201ENST00000397149 IL1RAPL2Q9NP60 686 aa14.25□□□□□ -0.13
SMU1-201ENST00000397149 SYCE3A1L190 88 aa14.25□□□□□ -0.13
SMU1-201ENST00000397149 JADE2Q9NQC1 790 aa14.25□□□□□ -0.13
SMU1-201ENST00000397149 ZBTB16Q05516 673 aa14.25□□□□□ -0.13
SMU1-201ENST00000397149 C11orf95C9JLR9 678 aaPredicted RBP14.24□□□□□ -0.13
SMU1-201ENST00000397149 WASF1Q92558 559 aa14.24□□□□□ -0.13
SMU1-201ENST00000397149 IDEP14735 1019 aa14.24□□□□□ -0.13
SMU1-201ENST00000397149 CKAP2LQ8IYA6 745 aa14.24□□□□□ -0.13
SMU1-201ENST00000397149 STAC3Q96MF2 364 aa14.24□□□□□ -0.13
SMU1-201ENST00000397149 TMEM110-MUSTN1A8MSY1 372 aa14.24□□□□□ -0.13
SMU1-201ENST00000397149 GTPBP4Q9BZE4 634 aaKnown RBP14.24□□□□□ -0.13
SMU1-201ENST00000397149 HYPKQ9NX55 129 aa14.24□□□□□ -0.13
SMU1-201ENST00000397149 CEP112Q8N8E3 955 aa14.24□□□□□ -0.13
SMU1-201ENST00000397149 ZSCAN12O43309 604 aa14.24□□□□□ -0.13
SMU1-201ENST00000397149 CASTP20810 708 aaKnown RBP14.24□□□□□ -0.13
SMU1-201ENST00000397149 NLRP5P59047 1200 aa14.24□□□□□ -0.13
SMU1-201ENST00000397149 NOB1Q9ULX3 412 aaKnown RBP14.24□□□□□ -0.13
SMU1-201ENST00000397149 PANK2Q9BZ23 570 aa14.24□□□□□ -0.13
SMU1-201ENST00000397149 MAP3K11Q16584 847 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms