RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 FLT4P35916 1363 aa17.58■□□□□ 0.41
SEC13-209ENST00000397117 EMILIN1Q9Y6C2 1016 aa17.58■□□□□ 0.41
SEC13-209ENST00000397117 PKD1L3Q7Z443 1732 aa17.58■□□□□ 0.4
SEC13-209ENST00000397117 AMIGO3Q86WK7 504 aa17.58■□□□□ 0.4
SEC13-209ENST00000397117 SMARCC1Q92922 1105 aaPredicted RBP17.58■□□□□ 0.4
SEC13-209ENST00000397117 ATP10DQ9P241 1426 aa17.57■□□□□ 0.4
SEC13-209ENST00000397117 MAP2P11137 1827 aaKnown RBP17.57■□□□□ 0.4
SEC13-209ENST00000397117 NKX1-1Q15270 411 aaPredicted RBP17.56■□□□□ 0.4
SEC13-209ENST00000397117 PIGBQ92521 554 aa17.56■□□□□ 0.4
SEC13-209ENST00000397117 NUDCQ9Y266 331 aa17.56■□□□□ 0.4
SEC13-209ENST00000397117 HNRNPUQ00839 825 aaKnown RBP eCLIP17.55■□□□□ 0.4
SEC13-209ENST00000397117 ADAMTS8Q9UP79 889 aa17.55■□□□□ 0.4
SEC13-209ENST00000397117 NCAPD2Q15021 1401 aa17.55■□□□□ 0.4
SEC13-209ENST00000397117 DIAPH1O60610 1272 aaKnown RBP17.54■□□□□ 0.4
SEC13-209ENST00000397117 AK7Q96M32 723 aa17.54■□□□□ 0.4
SEC13-209ENST00000397117 ADCY9O60503 1353 aa17.54■□□□□ 0.4
SEC13-209ENST00000397117 SMIM5Q71RC9 77 aa17.54■□□□□ 0.4
SEC13-209ENST00000397117 CEP350Q5VT06 3117 aa17.53■□□□□ 0.4
SEC13-209ENST00000397117 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.52■□□□□ 0.4
SEC13-209ENST00000397117 IFFO2Q5TF58 517 aa17.52■□□□□ 0.4
SEC13-209ENST00000397117 U2SURPO15042 1029 aaKnown RBP17.51■□□□□ 0.39
SEC13-209ENST00000397117 GPBP1L1Q9HC44 474 aaPredicted RBP17.51■□□□□ 0.39
SEC13-209ENST00000397117 COL3A1P02461 1466 aaPredicted RBP17.51■□□□□ 0.39
SEC13-209ENST00000397117 IGSF1Q8N6C5 1336 aa17.51■□□□□ 0.39
SEC13-209ENST00000397117 LOC102724428A0A0B4J2F2 783 aa17.5■□□□□ 0.39
SEC13-209ENST00000397117 CENPBP07199 599 aaPredicted RBP17.5■□□□□ 0.39
SEC13-209ENST00000397117 U2AF1L5P0DN76 240 aaPredicted RBP17.5■□□□□ 0.39
SEC13-209ENST00000397117 SSFA2P28290 1259 aa17.5■□□□□ 0.39
SEC13-209ENST00000397117 SIK1P57059 783 aa17.5■□□□□ 0.39
SEC13-209ENST00000397117 U2AF1Q01081 240 aaKnown RBP eCLIP17.5■□□□□ 0.39
SEC13-209ENST00000397117 LINC00116Q8NCU8 138 aa17.5■□□□□ 0.39
SEC13-209ENST00000397117 SPG7Q9UQ90 795 aa17.5■□□□□ 0.39
SEC13-209ENST00000397117 PHF14O94880 888 aa17.5■□□□□ 0.39
SEC13-209ENST00000397117 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.5■□□□□ 0.394e-7■■■□□ 17.9
SEC13-209ENST00000397117 ITPK1Q13572 414 aa17.48■□□□□ 0.39
SEC13-209ENST00000397117 EYA1Q99502 592 aa17.48■□□□□ 0.39
SEC13-209ENST00000397117 ASAP1Q9ULH1 1129 aa17.48■□□□□ 0.39
SEC13-209ENST00000397117 IL13P35225 146 aa17.47■□□□□ 0.39
SEC13-209ENST00000397117 TMOD3Q9NYL9 352 aa17.47■□□□□ 0.39
SEC13-209ENST00000397117 KIF13BQ9NQT8 1826 aa17.46■□□□□ 0.39
SEC13-209ENST00000397117 HSPA6P17066 643 aa17.46■□□□□ 0.39
SEC13-209ENST00000397117 CCDC146Q8IYE0 955 aa17.46■□□□□ 0.39
SEC13-209ENST00000397117 ZNF526Q8TF50 670 aaPredicted RBP17.46■□□□□ 0.39
SEC13-209ENST00000397117 PHKG2P15735 406 aa17.45■□□□□ 0.38
SEC13-209ENST00000397117 EIF4A2Q14240 407 aaKnown RBP17.45■□□□□ 0.38
SEC13-209ENST00000397117 IFNL2Q8IZJ0 200 aa17.45■□□□□ 0.38
SEC13-209ENST00000397117 PNNQ9H307 717 aaKnown RBP17.45■□□□□ 0.38
SEC13-209ENST00000397117 ATG3Q9NT62 314 aa17.45■□□□□ 0.38
SEC13-209ENST00000397117 WWC3Q9ULE0 1092 aa17.45■□□□□ 0.38
SEC13-209ENST00000397117 GNPATO15228 680 aa17.44■□□□□ 0.38
SEC13-209ENST00000397117 ATP6V1AP38606 617 aa17.44■□□□□ 0.38
SEC13-209ENST00000397117 CICQ96RK0 1608 aaPredicted RBP17.43■□□□□ 0.38
SEC13-209ENST00000397117 RUNDC1Q96C34 613 aa17.43■□□□□ 0.38
SEC13-209ENST00000397117 ZBED9Q6R2W3 1325 aa17.43■□□□□ 0.38
SEC13-209ENST00000397117 KIAA1551Q9HCM1 1747 aa17.43■□□□□ 0.38
SEC13-209ENST00000397117 KIF3CO14782 793 aa17.42■□□□□ 0.38
SEC13-209ENST00000397117 FCHSD2O94868 740 aa17.42■□□□□ 0.38
SEC13-209ENST00000397117 MMP10P09238 476 aa17.42■□□□□ 0.38
SEC13-209ENST00000397117 N4BP2Q86UW6 1770 aaPredicted RBP17.42■□□□□ 0.38
SEC13-209ENST00000397117 NEFMP07197 916 aa17.41■□□□□ 0.38
SEC13-209ENST00000397117 ZNF831Q5JPB2 1677 aa17.41■□□□□ 0.38
SEC13-209ENST00000397117 MAPK8IP3Q9UPT6 1336 aa17.4■□□□□ 0.38
SEC13-209ENST00000397117 SLC4A9Q96Q91 983 aa17.4■□□□□ 0.38
SEC13-209ENST00000397117 SALL2Q9Y467 1007 aaPredicted RBP17.4■□□□□ 0.38
SEC13-209ENST00000397117 PXDNLA1KZ92 1463 aa17.4■□□□□ 0.38
SEC13-209ENST00000397117 KDRP35968 1356 aa17.4■□□□□ 0.38
SEC13-209ENST00000397117 PLEKHG2Q9H7P9 1386 aa17.4■□□□□ 0.38
SEC13-209ENST00000397117 APAF1O14727 1248 aa17.39■□□□□ 0.38
SEC13-209ENST00000397117 HMOX1P09601 288 aa17.39■□□□□ 0.38
SEC13-209ENST00000397117 TGFB2P61812 414 aa17.39■□□□□ 0.38
SEC13-209ENST00000397117 TRAPPC3LQ5T215 181 aa17.39■□□□□ 0.37
SEC13-209ENST00000397117 RC3H1Q5TC82 1133 aaKnown RBP17.39■□□□□ 0.37
SEC13-209ENST00000397117 NLGN1Q8N2Q7 840 aa17.39■□□□□ 0.37
SEC13-209ENST00000397117 ERVV-2B6SEH9 535 aa17.38■□□□□ 0.37
SEC13-209ENST00000397117 SULT6B1Q6IMI4 303 aa17.38■□□□□ 0.37
SEC13-209ENST00000397117 RSPH6AQ9H0K4 717 aa17.38■□□□□ 0.37
SEC13-209ENST00000397117 RTCBQ9Y3I0 505 aaKnown RBP17.38■□□□□ 0.37
SEC13-209ENST00000397117 MYH14Q7Z406 1995 aaKnown RBP17.38■□□□□ 0.37
SEC13-209ENST00000397117 COL5A3P25940 1745 aaPredicted RBP17.37■□□□□ 0.37
SEC13-209ENST00000397117 A0A0G2JLW4 131 aa17.37■□□□□ 0.37
SEC13-209ENST00000397117 PRKAR2BP31323 418 aa17.37■□□□□ 0.37
SEC13-209ENST00000397117 NGEFQ8N5V2 710 aa17.37■□□□□ 0.37
SEC13-209ENST00000397117 ARHGEF1Q92888 912 aaKnown RBP17.37■□□□□ 0.37
SEC13-209ENST00000397117 BRCA1P38398 1863 aaKnown RBP17.37■□□□□ 0.37
SEC13-209ENST00000397117 PLEKHF1Q96S99 279 aa17.36■□□□□ 0.37
SEC13-209ENST00000397117 C10orf71Q711Q0 1435 aa17.36■□□□□ 0.37
SEC13-209ENST00000397117 ADRA2BP18089 450 aa17.36■□□□□ 0.37
SEC13-209ENST00000397117 C4AP0C0L4 1744 aa17.35■□□□□ 0.37
SEC13-209ENST00000397117 CNTNAP4Q9C0A0 1308 aa17.35■□□□□ 0.37
SEC13-209ENST00000397117 RPS6KA4O75676 772 aa17.35■□□□□ 0.37
SEC13-209ENST00000397117 GYS1P13807 737 aa17.35■□□□□ 0.37
SEC13-209ENST00000397117 DCAF5Q96JK2 942 aa17.35■□□□□ 0.37
SEC13-209ENST00000397117 RBM42Q9BTD8 480 aaKnown RBP17.35■□□□□ 0.37
SEC13-209ENST00000397117 BCS1LQ9Y276 419 aa17.35■□□□□ 0.37
SEC13-209ENST00000397117 AEBP1Q8IUX7 1158 aa17.34■□□□□ 0.37
SEC13-209ENST00000397117 HSP90AB1P08238 724 aaKnown RBP17.33■□□□□ 0.37
SEC13-209ENST00000397117 DPEP1P16444 411 aa17.33■□□□□ 0.37
SEC13-209ENST00000397117 NEUROD2Q15784 382 aa17.33■□□□□ 0.37
SEC13-209ENST00000397117 CCDC87Q9NVE4 849 aa17.33■□□□□ 0.37
SEC13-209ENST00000397117 PLEKHO1Q53GL0 409 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms