RNA–Protein interactions for RNA: ENST00000397113.6

FGFR1-209, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene FGFR1, Length 3,680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-209ENST00000397113 PLEKHM2Q8IWE5 1019 aa12.43□□□□□ -0.42
FGFR1-209ENST00000397113 C8orf58Q8NAV2 365 aa12.43□□□□□ -0.42
FGFR1-209ENST00000397113 MAP7D2Q96T17 732 aa12.43□□□□□ -0.42
FGFR1-209ENST00000397113 CHAF1AQ13111 956 aaPredicted RBP12.43□□□□□ -0.42
FGFR1-209ENST00000397113 LRSAM1Q6UWE0 723 aa12.43□□□□□ -0.42
FGFR1-209ENST00000397113 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.43□□□□□ -0.42
FGFR1-209ENST00000397113 CHMP4BQ9H444 224 aaKnown RBP12.43□□□□□ -0.42
FGFR1-209ENST00000397113 F6X3S4 739 aa12.43□□□□□ -0.42
FGFR1-209ENST00000397113 CABP1Q9NZU7 370 aa12.43□□□□□ -0.42
FGFR1-209ENST00000397113 YTHDC2Q9H6S0 1430 aaKnown RBP12.43□□□□□ -0.42
FGFR1-209ENST00000397113 GADD45BO75293 160 aaPredicted RBP12.42□□□□□ -0.42
FGFR1-209ENST00000397113 HDGFL2Q7Z4V5 671 aaPredicted RBP12.42□□□□□ -0.42
FGFR1-209ENST00000397113 SYAP1Q96A49 352 aaPredicted RBP12.42□□□□□ -0.42
FGFR1-209ENST00000397113 TERF2IPQ9NYB0 399 aa12.42□□□□□ -0.42
FGFR1-209ENST00000397113 NPHP1O15259 732 aa12.42□□□□□ -0.42
FGFR1-209ENST00000397113 RRS1Q15050 365 aaKnown RBP12.42□□□□□ -0.42
FGFR1-209ENST00000397113 CPSF1Q10570 1443 aaKnown RBP12.42□□□□□ -0.42
FGFR1-209ENST00000397113 TMX3Q96JJ7 454 aa12.41□□□□□ -0.42
FGFR1-209ENST00000397113 USP26Q9BXU7 913 aa12.41□□□□□ -0.42
FGFR1-209ENST00000397113 EMILIN1Q9Y6C2 1016 aa12.41□□□□□ -0.42
FGFR1-209ENST00000397113 ZMYM3Q14202 1370 aa12.41□□□□□ -0.42
FGFR1-209ENST00000397113 DDIT3P35638 169 aa12.41□□□□□ -0.42
FGFR1-209ENST00000397113 ZNF771Q7L3S4 317 aaPredicted RBP12.41□□□□□ -0.42
FGFR1-209ENST00000397113 NSD2O96028 1365 aa12.41□□□□□ -0.42
FGFR1-209ENST00000397113 SIPA1L3O60292 1781 aaPredicted RBP12.41□□□□□ -0.42
FGFR1-209ENST00000397113 ZNF445P59923 1031 aa12.41□□□□□ -0.42
FGFR1-209ENST00000397113 TTC22Q5TAA0 569 aa12.41□□□□□ -0.42
FGFR1-209ENST00000397113 MBIPQ9NS73 344 aa12.41□□□□□ -0.42
FGFR1-209ENST00000397113 MCCP23508 829 aa12.4□□□□□ -0.42
FGFR1-209ENST00000397113 PRAM1Q96QH2 718 aa12.4□□□□□ -0.42
FGFR1-209ENST00000397113 DYNC1I1O14576 645 aa12.4□□□□□ -0.42
FGFR1-209ENST00000397113 ADCY5O95622 1261 aa12.4□□□□□ -0.42
FGFR1-209ENST00000397113 CDK12Q9NYV4 1490 aaPredicted RBP12.4□□□□□ -0.42
FGFR1-209ENST00000397113 NHSL1Q5SYE7 1610 aa12.4□□□□□ -0.42
FGFR1-209ENST00000397113 VAMP4O75379 141 aa12.4□□□□□ -0.43
FGFR1-209ENST00000397113 MEIS3Q99687 375 aa12.4□□□□□ -0.43
FGFR1-209ENST00000397113 PARP4Q9UKK3 1724 aaKnown RBP12.39□□□□□ -0.43
FGFR1-209ENST00000397113 VPS37CA5D8V6 355 aaPredicted RBP12.39□□□□□ -0.43
FGFR1-209ENST00000397113 ERC2O15083 957 aa12.39□□□□□ -0.43
FGFR1-209ENST00000397113 FYB1O15117 783 aa12.39□□□□□ -0.43
FGFR1-209ENST00000397113 CT47B1P0C2W7 299 aaPredicted RBP12.39□□□□□ -0.43
FGFR1-209ENST00000397113 FBXW7Q969H0 707 aa12.39□□□□□ -0.43
FGFR1-209ENST00000397113 IL1RAPL2Q9NP60 686 aa12.39□□□□□ -0.43
FGFR1-209ENST00000397113 PPIP5K1Q6PFW1 1433 aa12.39□□□□□ -0.43
FGFR1-209ENST00000397113 CICQ96RK0 1608 aaPredicted RBP12.39□□□□□ -0.43
FGFR1-209ENST00000397113 API5Q9BZZ5 524 aaKnown RBP12.39□□□□□ -0.43
FGFR1-209ENST00000397113 RIMS2Q9UQ26 1411 aa12.39□□□□□ -0.43
FGFR1-209ENST00000397113 COL22A1Q8NFW1 1626 aaPredicted RBP12.39□□□□□ -0.43
FGFR1-209ENST00000397113 GIMAP6Q6P9H5 292 aa12.39□□□□□ -0.43
FGFR1-209ENST00000397113 MCM10Q7L590 875 aa12.39□□□□□ -0.43
FGFR1-209ENST00000397113 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.39□□□□□ -0.43
FGFR1-209ENST00000397113 ZRANB1Q9UGI0 708 aa12.39□□□□□ -0.43
FGFR1-209ENST00000397113 TMEM2Q9UHN6 1383 aa12.39□□□□□ -0.43
FGFR1-209ENST00000397113 PLEKHG2Q9H7P9 1386 aa12.38□□□□□ -0.43
FGFR1-209ENST00000397113 MBD3O95983 291 aa12.38□□□□□ -0.43
FGFR1-209ENST00000397113 PDIA4P13667 645 aaKnown RBP12.38□□□□□ -0.43
FGFR1-209ENST00000397113 GNAI1P63096 354 aa12.38□□□□□ -0.43
FGFR1-209ENST00000397113 CWC22Q9HCG8 908 aaKnown RBP12.38□□□□□ -0.43
FGFR1-209ENST00000397113 NOLC1Q14978 699 aaKnown RBP eCLIP12.38□□□□□ -0.43
FGFR1-209ENST00000397113 CAMK4Q16566 473 aa12.38□□□□□ -0.43
FGFR1-209ENST00000397113 MRPL50Q8N5N7 158 aaKnown RBP12.38□□□□□ -0.43
FGFR1-209ENST00000397113 KIF3AQ9Y496 699 aa12.38□□□□□ -0.43
FGFR1-209ENST00000397113 PEAK1Q9H792 1746 aa12.38□□□□□ -0.43
FGFR1-209ENST00000397113 FAM69CQ0P6D2 419 aa12.38□□□□□ -0.43
FGFR1-209ENST00000397113 ANKARQ7Z5J8 1434 aa12.37□□□□□ -0.43
FGFR1-209ENST00000397113 SLC4A2P04920 1241 aa12.37□□□□□ -0.43
FGFR1-209ENST00000397113 USP48Q86UV5 1035 aa12.37□□□□□ -0.43
FGFR1-209ENST00000397113 ZDHHC9Q9Y397 364 aa12.37□□□□□ -0.43
FGFR1-209ENST00000397113 KCNJ4P48050 445 aa12.37□□□□□ -0.43
FGFR1-209ENST00000397113 FERMT3Q86UX7 667 aa12.37□□□□□ -0.43
FGFR1-209ENST00000397113 PHF23Q9BUL5 403 aaPredicted RBP12.37□□□□□ -0.43
FGFR1-209ENST00000397113 IFT57Q9NWB7 429 aa12.37□□□□□ -0.43
FGFR1-209ENST00000397113 CNPY2Q9Y2B0 182 aa12.37□□□□□ -0.43
FGFR1-209ENST00000397113 COL18A1P39060 1754 aa12.37□□□□□ -0.43
FGFR1-209ENST00000397113 PLCH1Q4KWH8 1693 aa12.36□□□□□ -0.43
FGFR1-209ENST00000397113 U2AF2P26368 475 aaKnown RBP eCLIP12.36□□□□□ -0.431e-11■□□□□ 9.6
FGFR1-209ENST00000397113 PDCL2Q8N4E4 241 aa12.36□□□□□ -0.43
FGFR1-209ENST00000397113 NCAPD2Q15021 1401 aa12.36□□□□□ -0.43
FGFR1-209ENST00000397113 SLIT3O75094 1523 aa12.36□□□□□ -0.43
FGFR1-209ENST00000397113 GOLGA6L4A6NEF3 574 aa12.36□□□□□ -0.43
FGFR1-209ENST00000397113 ZNF500O60304 480 aaPredicted RBP12.36□□□□□ -0.43
FGFR1-209ENST00000397113 PHF14O94880 888 aa12.36□□□□□ -0.43
FGFR1-209ENST00000397113 PALD1Q9ULE6 856 aa12.36□□□□□ -0.43
FGFR1-209ENST00000397113 CPA1P15085 419 aa12.35□□□□□ -0.43
FGFR1-209ENST00000397113 ALDH1L2Q3SY69 923 aa12.35□□□□□ -0.43
FGFR1-209ENST00000397113 PLEKHF1Q96S99 279 aa12.35□□□□□ -0.43
FGFR1-209ENST00000397113 TNRQ92752 1358 aa12.35□□□□□ -0.43
FGFR1-209ENST00000397113 OS9Q13438 667 aaPredicted RBP12.35□□□□□ -0.43
FGFR1-209ENST00000397113 C16orf45Q96MC5 204 aaPredicted RBP12.35□□□□□ -0.43
FGFR1-209ENST00000397113 CGNQ9P2M7 1197 aaKnown RBP12.35□□□□□ -0.43
FGFR1-209ENST00000397113 FOSBP53539 338 aa12.35□□□□□ -0.43
FGFR1-209ENST00000397113 TRERF1Q96PN7 1200 aa12.35□□□□□ -0.43
FGFR1-209ENST00000397113 PRDM4Q9UKN5 801 aa12.35□□□□□ -0.43
FGFR1-209ENST00000397113 CDK11BP21127 795 aaKnown RBP12.34□□□□□ -0.43
FGFR1-209ENST00000397113 CCDC94Q9BW85 323 aaPredicted RBP12.34□□□□□ -0.43
FGFR1-209ENST00000397113 RAPGEF3O95398 923 aa12.34□□□□□ -0.43
FGFR1-209ENST00000397113 NFE2L2Q16236 605 aa12.34□□□□□ -0.43
FGFR1-209ENST00000397113 MTERF4Q7Z6M4 381 aaKnown RBP12.34□□□□□ -0.43
FGFR1-209ENST00000397113 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.34□□□□□ -0.43
FGFR1-209ENST00000397113 V9GYY5 206 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms