RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 ANKARQ7Z5J8 1434 aa12.01□□□□□ -0.49
TRIM39-203ENST00000396547 CBX1P83916 185 aa12.01□□□□□ -0.49
TRIM39-203ENST00000396547 CSPP1Q1MSJ5 1256 aa12.01□□□□□ -0.49
TRIM39-203ENST00000396547 BCL11BQ9C0K0 894 aaPredicted RBP12.01□□□□□ -0.49
TRIM39-203ENST00000396547 CHMP4BQ9H444 224 aaKnown RBP12.01□□□□□ -0.49
TRIM39-203ENST00000396547 USP32Q8NFA0 1604 aa12□□□□□ -0.49
TRIM39-203ENST00000396547 C19orf44Q9H6X5 657 aa12□□□□□ -0.49
TRIM39-203ENST00000396547 SLC4A10Q6U841 1118 aa12□□□□□ -0.49
TRIM39-203ENST00000396547 MAP7D2Q96T17 732 aa12□□□□□ -0.49
TRIM39-203ENST00000396547 PRDM4Q9UKN5 801 aa12□□□□□ -0.49
TRIM39-203ENST00000396547 PDIA4P13667 645 aaKnown RBP12□□□□□ -0.49
TRIM39-203ENST00000396547 SASS6Q6UVJ0 657 aa12□□□□□ -0.49
TRIM39-203ENST00000396547 TERF2IPQ9NYB0 399 aa12□□□□□ -0.49
TRIM39-203ENST00000396547 CABP1Q9NZU7 370 aa12□□□□□ -0.49
TRIM39-203ENST00000396547 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12□□□□□ -0.49
TRIM39-203ENST00000396547 A0A1W2PP64 1363 aa11.99□□□□□ -0.49
TRIM39-203ENST00000396547 PDLIM2Q96JY6 352 aa11.99□□□□□ -0.49
TRIM39-203ENST00000396547 LARP6Q9BRS8 491 aaKnown RBP11.99□□□□□ -0.49
TRIM39-203ENST00000396547 TTC12Q9H892 705 aaPredicted RBP11.99□□□□□ -0.49
TRIM39-203ENST00000396547 IL16Q14005 1332 aa11.99□□□□□ -0.49
TRIM39-203ENST00000396547 ANKRD36BQ8N2N9 1353 aa11.99□□□□□ -0.49
TRIM39-203ENST00000396547 TSPY26PQ9H489 355 aa11.99□□□□□ -0.49
TRIM39-203ENST00000396547 CWC22Q9HCG8 908 aaKnown RBP11.99□□□□□ -0.49
TRIM39-203ENST00000396547 KIAA2012Q0VF49 1180 aa11.98□□□□□ -0.49
TRIM39-203ENST00000396547 CLEC17AQ6ZS10 378 aa11.98□□□□□ -0.49
TRIM39-203ENST00000396547 PROSER2Q86WR7 435 aaPredicted RBP11.98□□□□□ -0.49
TRIM39-203ENST00000396547 UPF3BQ9BZI7 483 aaKnown RBP11.98□□□□□ -0.49
TRIM39-203ENST00000396547 USP25Q9UHP3 1055 aa11.98□□□□□ -0.49
TRIM39-203ENST00000396547 DYNC1I1O14576 645 aa11.98□□□□□ -0.49
TRIM39-203ENST00000396547 GADD45BO75293 160 aaPredicted RBP11.98□□□□□ -0.49
TRIM39-203ENST00000396547 CYP2E1P05181 493 aaPredicted RBP11.98□□□□□ -0.49
TRIM39-203ENST00000396547 HS1BP3Q53T59 392 aa11.98□□□□□ -0.49
TRIM39-203ENST00000396547 RILPL2Q969X0 211 aa11.98□□□□□ -0.49
TRIM39-203ENST00000396547 FCHSD2O94868 740 aa11.98□□□□□ -0.49
TRIM39-203ENST00000396547 GNAI1P63096 354 aa11.98□□□□□ -0.49
TRIM39-203ENST00000396547 TMX3Q96JJ7 454 aa11.98□□□□□ -0.49
TRIM39-203ENST00000396547 PRAM1Q96QH2 718 aa11.98□□□□□ -0.49
TRIM39-203ENST00000396547 EMILIN1Q9Y6C2 1016 aa11.98□□□□□ -0.49
TRIM39-203ENST00000396547 TRIM6-TRIM34B2RNG4 842 aa11.97□□□□□ -0.49
TRIM39-203ENST00000396547 IGSF3O75054 1194 aa11.97□□□□□ -0.49
TRIM39-203ENST00000396547 HDGFL2Q7Z4V5 671 aaPredicted RBP11.97□□□□□ -0.49
TRIM39-203ENST00000396547 CADPS2Q86UW7 1296 aa11.97□□□□□ -0.49
TRIM39-203ENST00000396547 API5Q9BZZ5 524 aaKnown RBP11.97□□□□□ -0.49
TRIM39-203ENST00000396547 NFE2L2Q16236 605 aa11.97□□□□□ -0.49
TRIM39-203ENST00000396547 DCTPP1Q9H773 170 aa11.97□□□□□ -0.49
TRIM39-203ENST00000396547 C1orf167Q5SNV9 1468 aa11.97□□□□□ -0.49
TRIM39-203ENST00000396547 IBTKQ9P2D0 1353 aaPredicted RBP11.96□□□□□ -0.49
TRIM39-203ENST00000396547 REC8O95072 547 aa11.96□□□□□ -0.49
TRIM39-203ENST00000396547 ANO2Q9NQ90 1003 aa11.96□□□□□ -0.49
TRIM39-203ENST00000396547 TULP4Q9NRJ4 1543 aa11.96□□□□□ -0.49
TRIM39-203ENST00000396547 SPDYE4A6NLX3 237 aa11.96□□□□□ -0.5
TRIM39-203ENST00000396547 TERF1P54274 439 aa11.96□□□□□ -0.5
TRIM39-203ENST00000396547 QRICH2Q9H0J4 1663 aa11.96□□□□□ -0.5
TRIM39-203ENST00000396547 ERC2O15083 957 aa11.95□□□□□ -0.5
TRIM39-203ENST00000396547 MEIS3Q99687 375 aa11.95□□□□□ -0.5
TRIM39-203ENST00000396547 ZRANB1Q9UGI0 708 aa11.95□□□□□ -0.5
TRIM39-203ENST00000396547 TRPM3Q9HCF6 1732 aaPredicted RBP11.95□□□□□ -0.5
TRIM39-203ENST00000396547 USP54Q70EL1 1684 aa11.95□□□□□ -0.5
TRIM39-203ENST00000396547 SOX12O15370 315 aa11.95□□□□□ -0.5
TRIM39-203ENST00000396547 MIS18AQ9NYP9 233 aa11.95□□□□□ -0.5
TRIM39-203ENST00000396547 EXOC6BQ9Y2D4 811 aa11.95□□□□□ -0.5
TRIM39-203ENST00000396547 UBAP1LF5GYI3 381 aa11.94□□□□□ -0.5
TRIM39-203ENST00000396547 MBD3O95983 291 aa11.94□□□□□ -0.5
TRIM39-203ENST00000396547 RRS1Q15050 365 aaKnown RBP11.94□□□□□ -0.5
TRIM39-203ENST00000396547 POLKQ9UBT6 870 aa11.94□□□□□ -0.5
TRIM39-203ENST00000396547 CHMP3Q9Y3E7 222 aa11.94□□□□□ -0.5
TRIM39-203ENST00000396547 MARF1Q9Y4F3 1742 aaKnown RBP11.94□□□□□ -0.5
TRIM39-203ENST00000396547 CRYBG1Q9Y4K1 1723 aa11.94□□□□□ -0.5
TRIM39-203ENST00000396547 SPC24Q8NBT2 197 aa11.93□□□□□ -0.5
TRIM39-203ENST00000396547 ARHGAP45Q92619 1136 aa11.93□□□□□ -0.5
TRIM39-203ENST00000396547 CDK19Q9BWU1 502 aa11.93□□□□□ -0.5
TRIM39-203ENST00000396547 PALD1Q9ULE6 856 aa11.93□□□□□ -0.5
TRIM39-203ENST00000396547 MED1Q15648 1581 aaPredicted RBP11.93□□□□□ -0.5
TRIM39-203ENST00000396547 F6X3S4 739 aa11.93□□□□□ -0.5
TRIM39-203ENST00000396547 HCLS1P14317 486 aaPredicted RBP11.93□□□□□ -0.5
TRIM39-203ENST00000396547 PXDNQ92626 1479 aa11.93□□□□□ -0.5
TRIM39-203ENST00000396547 PPP4R3BQ5MIZ7 849 aa11.93□□□□□ -0.5
TRIM39-203ENST00000396547 USP48Q86UV5 1035 aa11.93□□□□□ -0.5
TRIM39-203ENST00000396547 NECTIN2Q92692 538 aa11.93□□□□□ -0.5
TRIM39-203ENST00000396547 ABCC4O15439 1325 aa11.93□□□□□ -0.5
TRIM39-203ENST00000396547 ADCY5O95622 1261 aa11.92□□□□□ -0.5
TRIM39-203ENST00000396547 MAP4K4O95819 1239 aaPredicted RBP11.92□□□□□ -0.5
TRIM39-203ENST00000396547 NOLC1Q14978 699 aaKnown RBP eCLIP11.92□□□□□ -0.5
TRIM39-203ENST00000396547 NCBP3Q53F19 620 aaKnown RBP11.92□□□□□ -0.5
TRIM39-203ENST00000396547 CEP85Q6P2H3 762 aa11.92□□□□□ -0.5
TRIM39-203ENST00000396547 SYAP1Q96A49 352 aaPredicted RBP11.92□□□□□ -0.5
TRIM39-203ENST00000396547 ANKRD44Q8N8A2 993 aa11.92□□□□□ -0.5
TRIM39-203ENST00000396547 ALS2Q96Q42 1657 aa11.92□□□□□ -0.5
TRIM39-203ENST00000396547 MCM5P33992 734 aa11.91□□□□□ -0.5
TRIM39-203ENST00000396547 MCM10Q7L590 875 aa11.91□□□□□ -0.5
TRIM39-203ENST00000396547 CCDC94Q9BW85 323 aaPredicted RBP11.91□□□□□ -0.5
TRIM39-203ENST00000396547 SLAIN2Q9P270 581 aa11.91□□□□□ -0.5
TRIM39-203ENST00000396547 NSD2O96028 1365 aa11.91□□□□□ -0.5
TRIM39-203ENST00000396547 SMAP1Q8IYB5 467 aaPredicted RBP11.91□□□□□ -0.5
TRIM39-203ENST00000396547 IFT57Q9NWB7 429 aa11.91□□□□□ -0.5
TRIM39-203ENST00000396547 RGPD8O14715 1765 aaPredicted RBP11.91□□□□□ -0.5
TRIM39-203ENST00000396547 ABCA3Q99758 1704 aa11.91□□□□□ -0.5
TRIM39-203ENST00000396547 MTERF4Q7Z6M4 381 aaKnown RBP11.91□□□□□ -0.5
TRIM39-203ENST00000396547 ZNF428Q96B54 188 aa11.91□□□□□ -0.5
TRIM39-203ENST00000396547 FIBPO43427 364 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms