RNA–Protein interactions for RNA: ENST00000396247.7

RDH13-202, Transcript of retinol dehydrogenase 13, humanhuman

TSL 1 (best) BASIC

Gene RDH13, Length 1,987 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-202ENST00000396247 KDM3BQ7LBC6 1761 aa21.43■■□□□ 1.02
RDH13-202ENST00000396247 TOM1L2Q6ZVM7 507 aa21.43■■□□□ 1.02
RDH13-202ENST00000396247 ADAMTS7Q9UKP4 1686 aa21.42■■□□□ 1.02
RDH13-202ENST00000396247 ZBTB7BO15156 539 aaPredicted RBP21.42■■□□□ 1.02
RDH13-202ENST00000396247 PHKG2P15735 406 aa21.42■■□□□ 1.02
RDH13-202ENST00000396247 EIF4A1P60842 406 aaKnown RBP21.42■■□□□ 1.02
RDH13-202ENST00000396247 VIRMAQ69YN4 1812 aaKnown RBP21.42■■□□□ 1.02
RDH13-202ENST00000396247 RGS12O14924 1447 aa21.42■■□□□ 1.02
RDH13-202ENST00000396247 IFNL2Q8IZJ0 200 aa21.41■■□□□ 1.02
RDH13-202ENST00000396247 HOXB7P09629 217 aa21.39■■□□□ 1.02
RDH13-202ENST00000396247 HDAC1Q13547 482 aaPredicted RBP21.39■■□□□ 1.02
RDH13-202ENST00000396247 INTS3Q68E01 1043 aaKnown RBP21.39■■□□□ 1.02
RDH13-202ENST00000396247 PKD1L3Q7Z443 1732 aa21.39■■□□□ 1.01
RDH13-202ENST00000396247 G2E3Q7L622 706 aa21.39■■□□□ 1.01
RDH13-202ENST00000396247 KCNQ3O43525 872 aa21.38■■□□□ 1.01
RDH13-202ENST00000396247 EVA1CP58658 441 aa21.38■■□□□ 1.01
RDH13-202ENST00000396247 HDGFL1Q5TGJ6 251 aa21.38■■□□□ 1.01
RDH13-202ENST00000396247 NECTIN2Q92692 538 aa21.38■■□□□ 1.01
RDH13-202ENST00000396247 CHMP4AQ9BY43 222 aa21.38■■□□□ 1.01
RDH13-202ENST00000396247 KDM6AO15550 1401 aaPredicted RBP21.38■■□□□ 1.01
RDH13-202ENST00000396247 CARD10Q9BWT7 1032 aa21.37■■□□□ 1.01
RDH13-202ENST00000396247 STRN4Q9NRL3 753 aa21.37■■□□□ 1.01
RDH13-202ENST00000396247 SIPA1L3O60292 1781 aaPredicted RBP21.37■■□□□ 1.01
RDH13-202ENST00000396247 CYP27B1O15528 508 aa21.36■■□□□ 1.01
RDH13-202ENST00000396247 ZBTB47Q9UFB7 747 aaPredicted RBP21.36■■□□□ 1.01
RDH13-202ENST00000396247 SCN11AQ9UI33 1791 aa21.36■■□□□ 1.01
RDH13-202ENST00000396247 HSP90AB1P08238 724 aaKnown RBP21.36■■□□□ 1.01
RDH13-202ENST00000396247 RGS3P49796 1198 aa21.36■■□□□ 1.01
RDH13-202ENST00000396247 DCAF5Q96JK2 942 aa21.36■■□□□ 1.01
RDH13-202ENST00000396247 SLC52A2Q9HAB3 445 aa21.36■■□□□ 1.01
RDH13-202ENST00000396247 PARP4Q9UKK3 1724 aaKnown RBP21.35■■□□□ 1.01
RDH13-202ENST00000396247 CACNA1FO60840 1977 aa21.35■■□□□ 1.01
RDH13-202ENST00000396247 COL22A1Q8NFW1 1626 aaPredicted RBP21.35■■□□□ 1.01
RDH13-202ENST00000396247 FLIIQ13045 1269 aa21.35■■□□□ 1.01
RDH13-202ENST00000396247 LARP1Q6PKG0 1096 aaKnown RBP21.35■■□□□ 1.01
RDH13-202ENST00000396247 IL2RBP14784 551 aa21.33■■□□□ 1.01
RDH13-202ENST00000396247 EIF2S2P20042 333 aaKnown RBP21.33■■□□□ 1.01
RDH13-202ENST00000396247 ZCRB1Q8TBF4 217 aaKnown RBP21.33■■□□□ 1.01
RDH13-202ENST00000396247 FKBP5Q13451 457 aaPredicted RBP21.32■■□□□ 1
RDH13-202ENST00000396247 BTG4Q9NY30 223 aa21.32■■□□□ 1
RDH13-202ENST00000396247 HEG1Q9ULI3 1381 aa21.32■■□□□ 1
RDH13-202ENST00000396247 PCDH11XQ9BZA7 1347 aa21.32■■□□□ 1
RDH13-202ENST00000396247 PCDH11YQ9BZA8 1340 aa21.32■■□□□ 1
RDH13-202ENST00000396247 TOM1O60784 492 aa21.32■■□□□ 1
RDH13-202ENST00000396247 PDE4AP27815 886 aa21.32■■□□□ 1
RDH13-202ENST00000396247 C1orf115Q9H7X2 142 aa21.32■■□□□ 1
RDH13-202ENST00000396247 PDZRN3Q9UPQ7 1066 aa21.32■■□□□ 1
RDH13-202ENST00000396247 F6X3S4 739 aa21.31■■□□□ 1
RDH13-202ENST00000396247 DEKP35659 375 aaKnown RBP21.31■■□□□ 1
RDH13-202ENST00000396247 CCT4P50991 539 aaKnown RBP21.31■■□□□ 1
RDH13-202ENST00000396247 NFATC2IPQ8NCF5 419 aa21.31■■□□□ 1
RDH13-202ENST00000396247 COL14A1Q05707 1796 aaKnown RBP21.31■■□□□ 1
RDH13-202ENST00000396247 MRC1P22897 1456 aa21.31■■□□□ 1
RDH13-202ENST00000396247 GIGYF1O75420 1035 aaPredicted RBP21.3■■□□□ 1
RDH13-202ENST00000396247 SLC4A10Q6U841 1118 aa21.3■■□□□ 1
RDH13-202ENST00000396247 PHLPP1O60346 1717 aa21.3■■□□□ 1
RDH13-202ENST00000396247 SMC5Q8IY18 1101 aa21.3■■□□□ 1
RDH13-202ENST00000396247 ZNF790Q6PG37 636 aa21.29■■□□□ 1
RDH13-202ENST00000396247 BACH2Q9BYV9 841 aa21.29■■□□□ 1
RDH13-202ENST00000396247 CHPF2Q9P2E5 772 aa21.28■■□□□ 1
RDH13-202ENST00000396247 COL16A1Q07092 1604 aaPredicted RBP21.28■■□□□ 1
RDH13-202ENST00000396247 PIP4K2BP78356 416 aa21.27■■□□□ 1
RDH13-202ENST00000396247 SLC39A6Q13433 755 aa21.27■■□□□ 1
RDH13-202ENST00000396247 PHAXQ9H814 394 aaKnown RBP21.27■■□□□ 1
RDH13-202ENST00000396247 CABP4P57796 275 aa21.27■□□□□ 0.99
RDH13-202ENST00000396247 USP35Q9P2H5 1018 aa21.26■□□□□ 0.99
RDH13-202ENST00000396247 DBF4Q9UBU7 674 aaPredicted RBP21.26■□□□□ 0.99
RDH13-202ENST00000396247 MEIS3Q99687 375 aa21.25■□□□□ 0.99
RDH13-202ENST00000396247 SIRT2Q8IXJ6 389 aa21.25■□□□□ 0.99
RDH13-202ENST00000396247 PXDNLA1KZ92 1463 aa21.24■□□□□ 0.99
RDH13-202ENST00000396247 NBR1Q14596 966 aa21.24■□□□□ 0.99
RDH13-202ENST00000396247 NKX1-1Q15270 411 aaPredicted RBP21.24■□□□□ 0.99
RDH13-202ENST00000396247 RTL5Q5HYW3 569 aaPredicted RBP21.24■□□□□ 0.99
RDH13-202ENST00000396247 TTC5Q8N0Z6 440 aa21.24■□□□□ 0.99
RDH13-202ENST00000396247 PRAMEF22A3QJZ6 481 aa21.23■□□□□ 0.99
RDH13-202ENST00000396247 GCC1Q96CN9 775 aa21.23■□□□□ 0.99
RDH13-202ENST00000396247 FAM161AQ3B820 660 aa21.23■□□□□ 0.99
RDH13-202ENST00000396247 DDX54Q8TDD1 881 aaKnown RBP21.23■□□□□ 0.99
RDH13-202ENST00000396247 ERVV-2B6SEH9 535 aa21.22■□□□□ 0.99
RDH13-202ENST00000396247 RPAP2Q8IXW5 612 aaPredicted RBP21.22■□□□□ 0.99
RDH13-202ENST00000396247 ZNF496Q96IT1 587 aaPredicted RBP21.21■□□□□ 0.99
RDH13-202ENST00000396247 ATP10DQ9P241 1426 aa21.21■□□□□ 0.99
RDH13-202ENST00000396247 SHANK3Q9BYB0 1731 aa21.21■□□□□ 0.99
RDH13-202ENST00000396247 ANXA1P04083 346 aa21.21■□□□□ 0.99
RDH13-202ENST00000396247 NUCB1Q02818 461 aa21.21■□□□□ 0.99
RDH13-202ENST00000396247 ANKRD44Q8N8A2 993 aa21.21■□□□□ 0.99
RDH13-202ENST00000396247 UBAP1LF5GYI3 381 aa21.2■□□□□ 0.98
RDH13-202ENST00000396247 ADAMTS2O95450 1211 aa21.2■□□□□ 0.98
RDH13-202ENST00000396247 N4BP2Q86UW6 1770 aaPredicted RBP21.2■□□□□ 0.98
RDH13-202ENST00000396247 CEP85Q6P2H3 762 aa21.19■□□□□ 0.98
RDH13-202ENST00000396247 FMNL2Q96PY5 1086 aa21.19■□□□□ 0.98
RDH13-202ENST00000396247 HYPKQ9NX55 129 aa21.19■□□□□ 0.98
RDH13-202ENST00000396247 GNAI3P08754 354 aa21.19■□□□□ 0.98
RDH13-202ENST00000396247 C8orf34Q49A92 452 aa21.19■□□□□ 0.98
RDH13-202ENST00000396247 SNRPA1P09661 255 aaKnown RBP21.18■□□□□ 0.98
RDH13-202ENST00000396247 PROSER3Q2NL68 480 aa21.18■□□□□ 0.98
RDH13-202ENST00000396247 DDX21Q9NR30 783 aaKnown RBP eCLIP21.18■□□□□ 0.98
RDH13-202ENST00000396247 DISP2A7MBM2 1401 aa21.18■□□□□ 0.98
RDH13-202ENST00000396247 PI4KAP2A4QPH2 592 aa21.17■□□□□ 0.98
RDH13-202ENST00000396247 PI4KAP1Q8N8J0 262 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms