RNA–Protein interactions for RNA: ENST00000396212.6

CCP110-203, Transcript of centriolar coiled-coil protein 110, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCP110, Length 5,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-203ENST00000396212 GJB2P29033 226 aa16.57■□□□□ 0.24
CCP110-203ENST00000396212 ZHX3Q9H4I2 956 aa16.57■□□□□ 0.24
CCP110-203ENST00000396212 TFIP11Q9UBB9 837 aaKnown RBP16.57■□□□□ 0.24
CCP110-203ENST00000396212 FCHSD2O94868 740 aa16.57■□□□□ 0.24
CCP110-203ENST00000396212 ANKRD62A6NC57 917 aa16.57■□□□□ 0.24
CCP110-203ENST00000396212 CDKL5O76039 1030 aa16.57■□□□□ 0.24
CCP110-203ENST00000396212 MYL6BP14649 208 aa16.57■□□□□ 0.24
CCP110-203ENST00000396212 TXLNBQ8N3L3 684 aa16.57■□□□□ 0.24
CCP110-203ENST00000396212 LIMCH1Q9UPQ0 1083 aa16.57■□□□□ 0.24
CCP110-203ENST00000396212 BMS1Q14692 1282 aaKnown RBP16.57■□□□□ 0.24
CCP110-203ENST00000396212 SEPT7Q16181 437 aaKnown RBP16.57■□□□□ 0.24
CCP110-203ENST00000396212 RNF187Q5TA31 235 aaPredicted RBP16.57■□□□□ 0.24
CCP110-203ENST00000396212 KLHL10Q6JEL2 608 aa16.57■□□□□ 0.24
CCP110-203ENST00000396212 BBXQ8WY36 941 aaPredicted RBP16.57■□□□□ 0.24
CCP110-203ENST00000396212 ZRSR2Q15696 482 aaKnown RBP16.56■□□□□ 0.24
CCP110-203ENST00000396212 CNNM1Q9NRU3 951 aa16.56■□□□□ 0.24
CCP110-203ENST00000396212 AFAP1Q8N556 730 aa16.56■□□□□ 0.24
CCP110-203ENST00000396212 NOL7Q9UMY1 257 aaKnown RBP16.56■□□□□ 0.24
CCP110-203ENST00000396212 PDIA4P13667 645 aaKnown RBP16.56■□□□□ 0.24
CCP110-203ENST00000396212 TICAM2Q86XR7 235 aa16.56■□□□□ 0.24
CCP110-203ENST00000396212 CPLX3Q8WVH0 158 aa16.56■□□□□ 0.24
CCP110-203ENST00000396212 STX6O43752 255 aa16.56■□□□□ 0.24
CCP110-203ENST00000396212 NEMFO60524 1076 aa16.56■□□□□ 0.24
CCP110-203ENST00000396212 ALDH1L2Q3SY69 923 aa16.56■□□□□ 0.24
CCP110-203ENST00000396212 PLEKHO1Q53GL0 409 aaPredicted RBP16.56■□□□□ 0.24
CCP110-203ENST00000396212 KRT222Q8N1A0 295 aa16.56■□□□□ 0.24
CCP110-203ENST00000396212 RRAGDQ9NQL2 400 aaPredicted RBP16.56■□□□□ 0.24
CCP110-203ENST00000396212 SH2B1Q9NRF2 756 aaPredicted RBP16.56■□□□□ 0.24
CCP110-203ENST00000396212 BMP2KLQ5H9B9 411 aa16.55■□□□□ 0.24
CCP110-203ENST00000396212 PAXBP1Q9Y5B6 917 aa16.55■□□□□ 0.24
CCP110-203ENST00000396212 POLA1P09884 1462 aaPredicted RBP16.55■□□□□ 0.24
CCP110-203ENST00000396212 BIN1O00499 593 aa16.55■□□□□ 0.24
CCP110-203ENST00000396212 MAP9Q49MG5 647 aa16.55■□□□□ 0.24
CCP110-203ENST00000396212 ABTB2Q8N961 1025 aa16.55■□□□□ 0.24
CCP110-203ENST00000396212 IGSF3O75054 1194 aa16.55■□□□□ 0.24
CCP110-203ENST00000396212 ZKSCAN5Q9Y2L8 839 aa16.55■□□□□ 0.24
CCP110-203ENST00000396212 DDX19AQ9NUU7 478 aaKnown RBP16.54■□□□□ 0.24
CCP110-203ENST00000396212 RAB11FIP3O75154 756 aa16.54■□□□□ 0.24
CCP110-203ENST00000396212 SEPT11Q9NVA2 429 aaKnown RBP16.54■□□□□ 0.24
CCP110-203ENST00000396212 RBM25P49756 843 aaKnown RBP16.54■□□□□ 0.24
CCP110-203ENST00000396212 PIBF1Q8WXW3 757 aa16.54■□□□□ 0.24
CCP110-203ENST00000396212 TAF4BQ92750 862 aa16.54■□□□□ 0.24
CCP110-203ENST00000396212 CCDC94Q9BW85 323 aaPredicted RBP16.54■□□□□ 0.24
CCP110-203ENST00000396212 IKQ13123 557 aaPredicted RBP16.54■□□□□ 0.24
CCP110-203ENST00000396212 MCM10Q7L590 875 aa16.54■□□□□ 0.24
CCP110-203ENST00000396212 FSIP1Q8NA03 581 aa16.54■□□□□ 0.24
CCP110-203ENST00000396212 ZSWIM4Q9H7M6 989 aa16.54■□□□□ 0.24
CCP110-203ENST00000396212 STX1AQ16623 288 aa16.53■□□□□ 0.24
CCP110-203ENST00000396212 GSDMDP57764 484 aa16.53■□□□□ 0.24
CCP110-203ENST00000396212 UBE2HP62256 183 aa16.53■□□□□ 0.24
CCP110-203ENST00000396212 SLC3A2P08195 630 aaKnown RBP16.53■□□□□ 0.24
CCP110-203ENST00000396212 PRIM1P49642 420 aaKnown RBP16.53■□□□□ 0.24
CCP110-203ENST00000396212 TSHZ3Q63HK5 1081 aa16.53■□□□□ 0.24
CCP110-203ENST00000396212 KIF1BPQ96EK5 621 aa16.53■□□□□ 0.24
CCP110-203ENST00000396212 TTC12Q9H892 705 aaPredicted RBP16.53■□□□□ 0.24
CCP110-203ENST00000396212 ZNF165P49910 485 aa16.53■□□□□ 0.24
CCP110-203ENST00000396212 SPG7Q9UQ90 795 aa16.53■□□□□ 0.24
CCP110-203ENST00000396212 CTAGE5O15320 804 aa16.52■□□□□ 0.24
CCP110-203ENST00000396212 SUPT6HQ7KZ85 1726 aaKnown RBP16.52■□□□□ 0.24
CCP110-203ENST00000396212 PRXQ9BXM0 1461 aa16.52■□□□□ 0.24
CCP110-203ENST00000396212 SPINK5Q9NQ38 1064 aaPredicted RBP16.52■□□□□ 0.24
CCP110-203ENST00000396212 F6X3S4 739 aa16.52■□□□□ 0.23
CCP110-203ENST00000396212 TXNDC2Q86VQ3 553 aa16.52■□□□□ 0.23
CCP110-203ENST00000396212 SMARCC1Q92922 1105 aaPredicted RBP16.52■□□□□ 0.23
CCP110-203ENST00000396212 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.52■□□□□ 0.23
CCP110-203ENST00000396212 CTNNA3Q9UI47 895 aa16.52■□□□□ 0.23
CCP110-203ENST00000396212 V9GYY5 206 aaPredicted RBP16.52■□□□□ 0.23
CCP110-203ENST00000396212 NACAP1Q9BZK3 213 aa16.52■□□□□ 0.23
CCP110-203ENST00000396212 BOLA2Q9H3K6 86 aa16.52■□□□□ 0.23
CCP110-203ENST00000396212 CNPY2Q9Y2B0 182 aa16.52■□□□□ 0.23
CCP110-203ENST00000396212 GLRX3O76003 335 aaKnown RBP16.51■□□□□ 0.23
CCP110-203ENST00000396212 DNA2P51530 1060 aa16.51■□□□□ 0.23
CCP110-203ENST00000396212 MAP3K1Q13233 1512 aa16.51■□□□□ 0.23
CCP110-203ENST00000396212 ISM2Q6H9L7 571 aa16.51■□□□□ 0.23
CCP110-203ENST00000396212 KIF6Q6ZMV9 814 aa16.51■□□□□ 0.23
CCP110-203ENST00000396212 TMX3Q96JJ7 454 aa16.51■□□□□ 0.23
CCP110-203ENST00000396212 TTC22Q5TAA0 569 aa16.51■□□□□ 0.23
CCP110-203ENST00000396212 EFCAB5A4FU69 1503 aa16.51■□□□□ 0.23
CCP110-203ENST00000396212 SPA17Q15506 151 aa16.5■□□□□ 0.23
CCP110-203ENST00000396212 USP48Q86UV5 1035 aa16.5■□□□□ 0.23
CCP110-203ENST00000396212 CCDC113Q9H0I3 377 aa16.5■□□□□ 0.23
CCP110-203ENST00000396212 INCENPQ9NQS7 918 aa16.5■□□□□ 0.23
CCP110-203ENST00000396212 LIG1P18858 919 aa16.5■□□□□ 0.23
CCP110-203ENST00000396212 ZNF397Q8NF99 534 aaPredicted RBP16.5■□□□□ 0.23
CCP110-203ENST00000396212 BCCIPQ9P287 314 aaKnown RBP eCLIP16.5■□□□□ 0.23
CCP110-203ENST00000396212 CTR9Q6PD62 1173 aa16.5■□□□□ 0.23
CCP110-203ENST00000396212 PRG4Q92954 1404 aaPredicted RBP16.5■□□□□ 0.23
CCP110-203ENST00000396212 SSBP05455 408 aaKnown RBP eCLIP16.5■□□□□ 0.23
CCP110-203ENST00000396212 MCM3P25205 808 aa16.5■□□□□ 0.23
CCP110-203ENST00000396212 IMMTQ16891 758 aaKnown RBP16.5■□□□□ 0.23
CCP110-203ENST00000396212 CCDC186Q7Z3E2 898 aa16.5■□□□□ 0.23
CCP110-203ENST00000396212 RBM42Q9BTD8 480 aaKnown RBP16.5■□□□□ 0.23
CCP110-203ENST00000396212 PCDHB15Q9Y5E8 787 aa16.5■□□□□ 0.23
CCP110-203ENST00000396212 NUP88Q99567 741 aaPredicted RBP16.5■□□□□ 0.23
CCP110-203ENST00000396212 C8orf76Q96K31 380 aa16.49■□□□□ 0.23
CCP110-203ENST00000396212 GTPBP4Q9BZE4 634 aaKnown RBP16.49■□□□□ 0.23
CCP110-203ENST00000396212 AQRO60306 1485 aaKnown RBP eCLIP16.49■□□□□ 0.23
CCP110-203ENST00000396212 GTF2A1P52655 376 aaPredicted RBP16.49■□□□□ 0.23
CCP110-203ENST00000396212 CCT2P78371 535 aaKnown RBP16.49■□□□□ 0.23
CCP110-203ENST00000396212 MAP2K1Q02750 393 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms