RNA–Protein interactions for RNA: ENST00000396208.3

CCP110-202, Transcript of centriolar coiled-coil protein 110, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCP110, Length 5,151 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-202ENST00000396208 FSD1Q9BTV5 496 aa8.98□□□□□ -0.97
CCP110-202ENST00000396208 ANKRD2Q9GZV1 360 aa8.98□□□□□ -0.97
CCP110-202ENST00000396208 ZNF804AQ7Z570 1209 aa8.98□□□□□ -0.97
CCP110-202ENST00000396208 UTP14AQ9BVJ6 771 aaKnown RBP8.98□□□□□ -0.97
CCP110-202ENST00000396208 CWC25Q9NXE8 425 aaPredicted RBP8.98□□□□□ -0.97
CCP110-202ENST00000396208 HOOK1Q9UJC3 728 aaKnown RBP8.98□□□□□ -0.97
CCP110-202ENST00000396208 MYO5CQ9NQX4 1742 aa8.98□□□□□ -0.97
CCP110-202ENST00000396208 SLC4A3P48751 1232 aa8.98□□□□□ -0.97
CCP110-202ENST00000396208 ZNF335Q9H4Z2 1342 aaPredicted RBP8.97□□□□□ -0.97
CCP110-202ENST00000396208 USP5P45974 858 aa8.97□□□□□ -0.97
CCP110-202ENST00000396208 FEZ1Q99689 392 aa8.97□□□□□ -0.97
CCP110-202ENST00000396208 CTNNA3Q9UI47 895 aa8.97□□□□□ -0.97
CCP110-202ENST00000396208 IRX6P78412 446 aaPredicted RBP8.97□□□□□ -0.97
CCP110-202ENST00000396208 USHBP1Q8N6Y0 703 aa8.97□□□□□ -0.97
CCP110-202ENST00000396208 PSMA5P28066 241 aa8.97□□□□□ -0.97
CCP110-202ENST00000396208 KIF22Q14807 665 aa8.97□□□□□ -0.97
CCP110-202ENST00000396208 WDR78Q5VTH9 848 aa8.97□□□□□ -0.97
CCP110-202ENST00000396208 POLR3DP05423 398 aaPredicted RBP8.97□□□□□ -0.97
CCP110-202ENST00000396208 OTUD7BQ6GQQ9 843 aa8.97□□□□□ -0.97
CCP110-202ENST00000396208 PRM3Q9NNZ6 103 aa8.97□□□□□ -0.97
CCP110-202ENST00000396208 HECW2Q9P2P5 1572 aa8.97□□□□□ -0.97
CCP110-202ENST00000396208 SYAP1Q96A49 352 aaPredicted RBP8.96□□□□□ -0.97
CCP110-202ENST00000396208 A2ML1A8K2U0 1454 aa8.96□□□□□ -0.97
CCP110-202ENST00000396208 IFT57Q9NWB7 429 aa8.96□□□□□ -0.97
CCP110-202ENST00000396208 NIP7Q9Y221 180 aaKnown RBP eCLIP8.96□□□□□ -0.97
CCP110-202ENST00000396208 MAP3K12Q12852 859 aa8.96□□□□□ -0.98
CCP110-202ENST00000396208 CNKSR1Q969H4 720 aa8.96□□□□□ -0.98
CCP110-202ENST00000396208 DZIP3Q86Y13 1208 aaKnown RBP8.95□□□□□ -0.98
CCP110-202ENST00000396208 ORAI2Q96SN7 254 aa8.95□□□□□ -0.98
CCP110-202ENST00000396208 PTMAP06454 111 aaKnown RBP8.95□□□□□ -0.98
CCP110-202ENST00000396208 NIM1KQ8IY84 436 aa8.95□□□□□ -0.98
CCP110-202ENST00000396208 H7C1D1 291 aa8.95□□□□□ -0.98
CCP110-202ENST00000396208 BIN2Q9UBW5 565 aaPredicted RBP8.95□□□□□ -0.98
CCP110-202ENST00000396208 MAST3O60307 1309 aa8.95□□□□□ -0.98
CCP110-202ENST00000396208 KDM5CP41229 1560 aa8.95□□□□□ -0.98
CCP110-202ENST00000396208 ABCC1P33527 1531 aa8.95□□□□□ -0.98
CCP110-202ENST00000396208 AFF2P51816 1311 aa8.95□□□□□ -0.98
CCP110-202ENST00000396208 PLCG2P16885 1265 aa8.94□□□□□ -0.98
CCP110-202ENST00000396208 TRIM44Q96DX7 344 aaPredicted RBP8.94□□□□□ -0.98
CCP110-202ENST00000396208 ARAP3Q8WWN8 1544 aa8.94□□□□□ -0.98
CCP110-202ENST00000396208 GRIN3BO60391 1043 aa8.94□□□□□ -0.98
CCP110-202ENST00000396208 MYD88Q99836 296 aa8.94□□□□□ -0.98
CCP110-202ENST00000396208 EIF2AK4Q9P2K8 1649 aaKnown RBP8.94□□□□□ -0.98
CCP110-202ENST00000396208 TTF1Q15361 905 aaPredicted RBP8.94□□□□□ -0.98
CCP110-202ENST00000396208 SPON1Q9HCB6 807 aa8.94□□□□□ -0.98
CCP110-202ENST00000396208 ANO2Q9NQ90 1003 aa8.94□□□□□ -0.98
CCP110-202ENST00000396208 ABCF2Q9UG63 623 aa8.94□□□□□ -0.98
CCP110-202ENST00000396208 MVPQ14764 893 aaKnown RBP8.94□□□□□ -0.98
CCP110-202ENST00000396208 SOS1Q07889 1333 aaPredicted RBP8.94□□□□□ -0.98
CCP110-202ENST00000396208 UQCRFS1P1P0C7P4 283 aa8.93□□□□□ -0.98
CCP110-202ENST00000396208 TDO2P48775 406 aa8.93□□□□□ -0.98
CCP110-202ENST00000396208 DUSP27Q5VZP5 1158 aa8.93□□□□□ -0.98
CCP110-202ENST00000396208 RBM27Q9P2N5 1060 aaKnown RBP8.93□□□□□ -0.98
CCP110-202ENST00000396208 LRRFIP2Q9Y608 721 aaKnown RBP8.93□□□□□ -0.98
CCP110-202ENST00000396208 ZCCHC11Q5TAX3 1644 aaKnown RBP8.93□□□□□ -0.98
CCP110-202ENST00000396208 PPP4R3AQ6IN85 833 aa8.93□□□□□ -0.98
CCP110-202ENST00000396208 ARHGAP27Q6ZUM4 889 aa8.93□□□□□ -0.98
CCP110-202ENST00000396208 SEPT12Q8IYM1 358 aa8.93□□□□□ -0.98
CCP110-202ENST00000396208 BCS1LQ9Y276 419 aa8.93□□□□□ -0.98
CCP110-202ENST00000396208 SAMD9Q5K651 1589 aa8.93□□□□□ -0.98
CCP110-202ENST00000396208 MAST1Q9Y2H9 1570 aa8.93□□□□□ -0.98
CCP110-202ENST00000396208 TCOF1Q13428 1488 aaKnown RBP8.93□□□□□ -0.98
CCP110-202ENST00000396208 CCDC178Q5BJE1 867 aa8.93□□□□□ -0.98
CCP110-202ENST00000396208 LARGE2Q8N3Y3 721 aa8.93□□□□□ -0.98
CCP110-202ENST00000396208 EMILIN1Q9Y6C2 1016 aa8.93□□□□□ -0.98
CCP110-202ENST00000396208 ANKRD20A12PQ8NF67 263 aa8.92□□□□□ -0.98
CCP110-202ENST00000396208 GPTP24298 496 aa8.92□□□□□ -0.98
CCP110-202ENST00000396208 TPD52L1Q16890 204 aaPredicted RBP8.92□□□□□ -0.98
CCP110-202ENST00000396208 CUL5Q93034 780 aa8.92□□□□□ -0.98
CCP110-202ENST00000396208 MKNK2Q9HBH9 465 aa8.92□□□□□ -0.98
CCP110-202ENST00000396208 GJA3Q9Y6H8 435 aa8.92□□□□□ -0.98
CCP110-202ENST00000396208 SPDYE4A6NLX3 237 aa8.92□□□□□ -0.98
CCP110-202ENST00000396208 INTS3Q68E01 1043 aaKnown RBP8.92□□□□□ -0.98
CCP110-202ENST00000396208 CERS3Q8IU89 383 aa8.92□□□□□ -0.98
CCP110-202ENST00000396208 ZBTB3Q9H5J0 574 aa8.92□□□□□ -0.98
CCP110-202ENST00000396208 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.92□□□□□ -0.98
CCP110-202ENST00000396208 TRIM22Q8IYM9 498 aa8.91□□□□□ -0.98
CCP110-202ENST00000396208 ZNF444Q8N0Y2 327 aaPredicted RBP8.91□□□□□ -0.98
CCP110-202ENST00000396208 UBAC1Q9BSL1 405 aa8.91□□□□□ -0.98
CCP110-202ENST00000396208 SH2D4AQ9H788 454 aa8.91□□□□□ -0.98
CCP110-202ENST00000396208 PLEKHG3A1L390 1219 aa8.91□□□□□ -0.98
CCP110-202ENST00000396208 ERVV-2B6SEH9 535 aa8.91□□□□□ -0.98
CCP110-202ENST00000396208 LTKP29376 864 aa8.91□□□□□ -0.98
CCP110-202ENST00000396208 CC2D2BQ6DHV5 1058 aa8.91□□□□□ -0.98
CCP110-202ENST00000396208 DNAAF4Q8WXU2 420 aa8.91□□□□□ -0.98
CCP110-202ENST00000396208 LRRCC1Q9C099 1032 aa8.91□□□□□ -0.98
CCP110-202ENST00000396208 TPRNQ4KMQ1 711 aa8.91□□□□□ -0.98
CCP110-202ENST00000396208 GRIPAP1Q4V328 841 aa8.91□□□□□ -0.98
CCP110-202ENST00000396208 GBP4Q96PP9 640 aa8.91□□□□□ -0.98
CCP110-202ENST00000396208 CFAP43Q8NDM7 1665 aa8.91□□□□□ -0.98
CCP110-202ENST00000396208 ZFYVE9O95405 1425 aa8.91□□□□□ -0.98
CCP110-202ENST00000396208 TSR1Q2NL82 804 aaKnown RBP8.91□□□□□ -0.98
CCP110-202ENST00000396208 BRDTQ58F21 947 aaPredicted RBP8.91□□□□□ -0.98
CCP110-202ENST00000396208 LDHAL6AQ6ZMR3 332 aa8.91□□□□□ -0.98
CCP110-202ENST00000396208 TMC4Q7Z404 712 aa8.91□□□□□ -0.98
CCP110-202ENST00000396208 RNF41Q9H4P4 317 aaPredicted RBP8.91□□□□□ -0.98
CCP110-202ENST00000396208 EXOSC9Q06265 439 aaKnown RBP8.9□□□□□ -0.98
CCP110-202ENST00000396208 TNFAIP1Q13829 316 aa8.9□□□□□ -0.98
CCP110-202ENST00000396208 ANKRD13DQ6ZTN6 518 aa8.9□□□□□ -0.98
CCP110-202ENST00000396208 CDK5RAP3Q96JB5 506 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms