RNA–Protein interactions for RNA: ENST00000395840.6

RAE1-202, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-202ENST00000395840 ISY1Q9ULR0 285 aaKnown RBP11.34□□□□□ -0.59
RAE1-202ENST00000395840 PEAK1Q9H792 1746 aa11.33□□□□□ -0.6
RAE1-202ENST00000395840 MTHFSP49914 203 aa11.33□□□□□ -0.6
RAE1-202ENST00000395840 HSP90AB2PQ58FF8 381 aa11.33□□□□□ -0.6
RAE1-202ENST00000395840 ZSCAN20P17040 1043 aaPredicted RBP11.33□□□□□ -0.6
RAE1-202ENST00000395840 ZSCAN30Q86W11 494 aa11.33□□□□□ -0.6
RAE1-202ENST00000395840 GLI3P10071 1580 aa11.32□□□□□ -0.6
RAE1-202ENST00000395840 FBLN1P23142 703 aa11.32□□□□□ -0.6
RAE1-202ENST00000395840 PPP2R1AP30153 589 aa11.32□□□□□ -0.6
RAE1-202ENST00000395840 MTERF4Q7Z6M4 381 aaKnown RBP11.32□□□□□ -0.6
RAE1-202ENST00000395840 UQCRHLA0A096LP55 91 aa11.32□□□□□ -0.6
RAE1-202ENST00000395840 UQCRHP07919 91 aa11.32□□□□□ -0.6
RAE1-202ENST00000395840 TBC1D2Q9BYX2 928 aa11.32□□□□□ -0.6
RAE1-202ENST00000395840 TMEM51Q9NW97 253 aa11.32□□□□□ -0.6
RAE1-202ENST00000395840 MYBBP1AQ9BQG0 1328 aaKnown RBP11.32□□□□□ -0.6
RAE1-202ENST00000395840 MSNP26038 577 aaKnown RBP11.31□□□□□ -0.6
RAE1-202ENST00000395840 LTV1Q96GA3 475 aaPredicted RBP11.31□□□□□ -0.6
RAE1-202ENST00000395840 DIAPH1O60610 1272 aaKnown RBP11.31□□□□□ -0.6
RAE1-202ENST00000395840 GAS2L3Q86XJ1 694 aa11.31□□□□□ -0.6
RAE1-202ENST00000395840 ANP32BQ92688 251 aaKnown RBP11.31□□□□□ -0.6
RAE1-202ENST00000395840 IL2RBP14784 551 aa11.3□□□□□ -0.6
RAE1-202ENST00000395840 EIF4A2Q14240 407 aaKnown RBP11.3□□□□□ -0.6
RAE1-202ENST00000395840 FAM98CQ17RN3 349 aaKnown RBP11.3□□□□□ -0.6
RAE1-202ENST00000395840 THSD7AQ9UPZ6 1657 aa11.3□□□□□ -0.6
RAE1-202ENST00000395840 A0A0G2JS52 829 aa11.29□□□□□ -0.6
RAE1-202ENST00000395840 VGLL3A8MV65 326 aa11.29□□□□□ -0.6
RAE1-202ENST00000395840 SEPT12Q8IYM1 358 aa11.29□□□□□ -0.6
RAE1-202ENST00000395840 RAPGEF4Q8WZA2 1011 aa11.29□□□□□ -0.6
RAE1-202ENST00000395840 PARP4Q9UKK3 1724 aaKnown RBP11.29□□□□□ -0.6
RAE1-202ENST00000395840 WNK3Q9BYP7 1800 aa11.29□□□□□ -0.6
RAE1-202ENST00000395840 NCAPD2Q15021 1401 aa11.29□□□□□ -0.6
RAE1-202ENST00000395840 CCDC173Q0VFZ6 552 aa11.28□□□□□ -0.6
RAE1-202ENST00000395840 PLCD3Q8N3E9 789 aa11.28□□□□□ -0.6
RAE1-202ENST00000395840 RGS12O14924 1447 aa11.28□□□□□ -0.6
RAE1-202ENST00000395840 EXOC5O00471 708 aa11.28□□□□□ -0.6
RAE1-202ENST00000395840 TATP17735 454 aaPredicted RBP11.28□□□□□ -0.6
RAE1-202ENST00000395840 IL13P35225 146 aa11.28□□□□□ -0.6
RAE1-202ENST00000395840 NBPF6Q5VWK0 638 aa11.28□□□□□ -0.6
RAE1-202ENST00000395840 NBPF4Q96M43 638 aa11.28□□□□□ -0.6
RAE1-202ENST00000395840 ZNF830Q96NB3 372 aaPredicted RBP11.28□□□□□ -0.6
RAE1-202ENST00000395840 CCDC94Q9BW85 323 aaPredicted RBP11.28□□□□□ -0.6
RAE1-202ENST00000395840 IGSF1Q8N6C5 1336 aa11.28□□□□□ -0.6
RAE1-202ENST00000395840 DISP2A7MBM2 1401 aa11.28□□□□□ -0.6
RAE1-202ENST00000395840 DDB1Q16531 1140 aa11.27□□□□□ -0.6
RAE1-202ENST00000395840 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.27□□□□□ -0.67e-6■□□□□ 9.2
RAE1-202ENST00000395840 DDX11L8A8MPP1 907 aa11.27□□□□□ -0.61
RAE1-202ENST00000395840 DYNC1I1O14576 645 aa11.27□□□□□ -0.61
RAE1-202ENST00000395840 EYA1Q99502 592 aa11.27□□□□□ -0.61
RAE1-202ENST00000395840 CHMP5Q9NZZ3 219 aa11.27□□□□□ -0.61
RAE1-202ENST00000395840 KRT27Q7Z3Y8 459 aa11.26□□□□□ -0.61
RAE1-202ENST00000395840 COL3A1P02461 1466 aaPredicted RBP11.26□□□□□ -0.61
RAE1-202ENST00000395840 KIF20AO95235 890 aa11.26□□□□□ -0.61
RAE1-202ENST00000395840 PPP1R9BQ96SB3 815 aa11.26□□□□□ -0.61
RAE1-202ENST00000395840 AMOTQ4VCS5 1084 aa11.25□□□□□ -0.61
RAE1-202ENST00000395840 SPG7Q9UQ90 795 aa11.25□□□□□ -0.61
RAE1-202ENST00000395840 TNS2Q63HR2 1409 aa11.25□□□□□ -0.61
RAE1-202ENST00000395840 RGPD1P0DJD0 1748 aa11.25□□□□□ -0.61
RAE1-202ENST00000395840 OVOS2A0A0G2JMS6 1433 aa11.25□□□□□ -0.61
RAE1-202ENST00000395840 KDRP35968 1356 aa11.25□□□□□ -0.61
RAE1-202ENST00000395840 ZCRB1Q8TBF4 217 aaKnown RBP11.24□□□□□ -0.61
RAE1-202ENST00000395840 UPF2Q9HAU5 1272 aaKnown RBP11.24□□□□□ -0.61
RAE1-202ENST00000395840 FAM196AQ6ZSG2 479 aa11.24□□□□□ -0.61
RAE1-202ENST00000395840 GTPBP4Q9BZE4 634 aaKnown RBP11.24□□□□□ -0.61
RAE1-202ENST00000395840 RGPD2P0DJD1 1756 aa11.24□□□□□ -0.61
RAE1-202ENST00000395840 LRRC37A3O60309 1634 aa11.23□□□□□ -0.61
RAE1-202ENST00000395840 PLEKHO1Q53GL0 409 aaPredicted RBP11.23□□□□□ -0.61
RAE1-202ENST00000395840 CCDC125Q86Z20 511 aa11.23□□□□□ -0.61
RAE1-202ENST00000395840 TBC1D32Q96NH3 1257 aa11.23□□□□□ -0.61
RAE1-202ENST00000395840 BCL9O00512 1426 aa11.23□□□□□ -0.61
RAE1-202ENST00000395840 U2SURPO15042 1029 aaKnown RBP11.23□□□□□ -0.61
RAE1-202ENST00000395840 NASPP49321 788 aaPredicted RBP11.23□□□□□ -0.61
RAE1-202ENST00000395840 PCDH11XQ9BZA7 1347 aa11.23□□□□□ -0.61
RAE1-202ENST00000395840 PCDH11YQ9BZA8 1340 aa11.23□□□□□ -0.61
RAE1-202ENST00000395840 FCHSD2O94868 740 aa11.22□□□□□ -0.61
RAE1-202ENST00000395840 LETM1O95202 739 aaPredicted RBP11.22□□□□□ -0.61
RAE1-202ENST00000395840 SULT6B1Q6IMI4 303 aa11.22□□□□□ -0.61
RAE1-202ENST00000395840 HSP90AB1P08238 724 aaKnown RBP11.22□□□□□ -0.61
RAE1-202ENST00000395840 CBX1P83916 185 aa11.22□□□□□ -0.61
RAE1-202ENST00000395840 USHBP1Q8N6Y0 703 aa11.22□□□□□ -0.61
RAE1-202ENST00000395840 BRWD3Q6RI45 1802 aa11.21□□□□□ -0.61
RAE1-202ENST00000395840 PKD1L3Q7Z443 1732 aa11.21□□□□□ -0.62
RAE1-202ENST00000395840 MEGF6O75095 1541 aa11.21□□□□□ -0.62
RAE1-202ENST00000395840 ZNF500O60304 480 aaPredicted RBP11.21□□□□□ -0.62
RAE1-202ENST00000395840 IGHDP01880 384 aa11.21□□□□□ -0.62
RAE1-202ENST00000395840 U2AF1L5P0DN76 240 aaPredicted RBP11.21□□□□□ -0.62
RAE1-202ENST00000395840 U2AF1Q01081 240 aaKnown RBP eCLIP11.21□□□□□ -0.62
RAE1-202ENST00000395840 WDR43Q15061 677 aaKnown RBP eCLIP11.21□□□□□ -0.62
RAE1-202ENST00000395840 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.2□□□□□ -0.62
RAE1-202ENST00000395840 MAPK8IP3Q9UPT6 1336 aa11.2□□□□□ -0.62
RAE1-202ENST00000395840 ZBTB22O15209 634 aa11.2□□□□□ -0.62
RAE1-202ENST00000395840 ILDR2Q71H61 639 aa11.2□□□□□ -0.62
RAE1-202ENST00000395840 IFNL2Q8IZJ0 200 aa11.19□□□□□ -0.62
RAE1-202ENST00000395840 NOL7Q9UMY1 257 aaKnown RBP11.19□□□□□ -0.62
RAE1-202ENST00000395840 KCNA4P22459 653 aa11.19□□□□□ -0.62
RAE1-202ENST00000395840 HMGB2P26583 209 aaKnown RBP11.19□□□□□ -0.62
RAE1-202ENST00000395840 C1orf141Q5JVX7 400 aa11.19□□□□□ -0.62
RAE1-202ENST00000395840 SASS6Q6UVJ0 657 aa11.19□□□□□ -0.62
RAE1-202ENST00000395840 FTSJ3Q8IY81 847 aaKnown RBP11.19□□□□□ -0.62
RAE1-202ENST00000395840 GAS2L2Q8NHY3 880 aa11.19□□□□□ -0.62
RAE1-202ENST00000395840 SF3B2Q13435 895 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms