RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 UPP2O95045 317 aa9.46□□□□□ -0.9
AP3S1-202ENST00000395548 DHX9Q08211 1270 aaKnown RBP9.46□□□□□ -0.9
AP3S1-202ENST00000395548 OCSTAMPQ9BR26 566 aa9.46□□□□□ -0.9
AP3S1-202ENST00000395548 PGPEP1Q9NXJ5 209 aa9.46□□□□□ -0.9
AP3S1-202ENST00000395548 KIF27Q86VH2 1401 aa9.46□□□□□ -0.9
AP3S1-202ENST00000395548 ABCA8O94911 1581 aa9.46□□□□□ -0.9
AP3S1-202ENST00000395548 NBPF20Q3BBV1 942 aa9.45□□□□□ -0.9
AP3S1-202ENST00000395548 PURBQ96QR8 312 aaKnown RBP9.45□□□□□ -0.9
AP3S1-202ENST00000395548 APBB1O00213 710 aa9.44□□□□□ -0.9
AP3S1-202ENST00000395548 DZIP3Q86Y13 1208 aaKnown RBP9.44□□□□□ -0.9
AP3S1-202ENST00000395548 SHANK2Q9UPX8 1470 aa9.44□□□□□ -0.9
AP3S1-202ENST00000395548 CFAP74Q9C0B2 1584 aa9.43□□□□□ -0.9
AP3S1-202ENST00000395548 TCOF1Q13428 1488 aaKnown RBP9.43□□□□□ -0.9
AP3S1-202ENST00000395548 NPATQ14207 1427 aa9.43□□□□□ -0.9
AP3S1-202ENST00000395548 WFS1O76024 890 aa9.43□□□□□ -0.9
AP3S1-202ENST00000395548 PPP1R26Q5T8A7 1209 aaPredicted RBP9.43□□□□□ -0.9
AP3S1-202ENST00000395548 GJD4Q96KN9 370 aaPredicted RBP9.43□□□□□ -0.9
AP3S1-202ENST00000395548 RAPGEF2Q9Y4G8 1499 aa9.42□□□□□ -0.9
AP3S1-202ENST00000395548 MEIOBQ8N635 442 aa9.42□□□□□ -0.9
AP3S1-202ENST00000395548 C3P01024 1663 aa9.42□□□□□ -0.9
AP3S1-202ENST00000395548 CNTLNQ9NXG0 1405 aa9.41□□□□□ -0.9
AP3S1-202ENST00000395548 ZBBXA8MT70 800 aa9.41□□□□□ -0.9
AP3S1-202ENST00000395548 TERTO14746 1132 aaKnown RBP9.41□□□□□ -0.9
AP3S1-202ENST00000395548 BMP2P12643 396 aa9.41□□□□□ -0.9
AP3S1-202ENST00000395548 INTS6LQ5JSJ4 861 aaKnown RBP9.41□□□□□ -0.9
AP3S1-202ENST00000395548 C6orf118Q5T5N4 469 aa9.41□□□□□ -0.9
AP3S1-202ENST00000395548 LINC00528Q8N1L1 170 aa9.41□□□□□ -0.9
AP3S1-202ENST00000395548 TSEN34Q9BSV6 310 aaKnown RBP9.41□□□□□ -0.9
AP3S1-202ENST00000395548 HECW1Q76N89 1606 aa9.41□□□□□ -0.9
AP3S1-202ENST00000395548 ATP10BO94823 1461 aa9.4□□□□□ -0.9
AP3S1-202ENST00000395548 GOLGA3Q08378 1498 aa9.4□□□□□ -0.9
AP3S1-202ENST00000395548 TRIM52Q96A61 297 aa9.4□□□□□ -0.9
AP3S1-202ENST00000395548 ARID3CA6NKF2 412 aa9.39□□□□□ -0.91
AP3S1-202ENST00000395548 NFX1Q12986 1120 aaKnown RBP9.39□□□□□ -0.91
AP3S1-202ENST00000395548 SLC16A10Q8TF71 515 aa9.39□□□□□ -0.91
AP3S1-202ENST00000395548 NXF1Q9UBU9 619 aaKnown RBP9.39□□□□□ -0.91
AP3S1-202ENST00000395548 ALKQ9UM73 1620 aa9.38□□□□□ -0.91
AP3S1-202ENST00000395548 LCE2AQ5TA79 106 aaPredicted RBP9.38□□□□□ -0.91
AP3S1-202ENST00000395548 ZNF772Q68DY9 489 aaPredicted RBP9.38□□□□□ -0.91
AP3S1-202ENST00000395548 NPAS3Q8IXF0 933 aa9.38□□□□□ -0.91
AP3S1-202ENST00000395548 ZNF592Q92610 1267 aa9.38□□□□□ -0.91
AP3S1-202ENST00000395548 NDUFB9Q9Y6M9 179 aa9.38□□□□□ -0.91
AP3S1-202ENST00000395548 MAN1A2O60476 641 aa9.37□□□□□ -0.91
AP3S1-202ENST00000395548 MCCD1P59942 119 aaPredicted RBP9.37□□□□□ -0.91
AP3S1-202ENST00000395548 Q6ZVU0 165 aa9.37□□□□□ -0.91
AP3S1-202ENST00000395548 SEPT12Q8IYM1 358 aa9.37□□□□□ -0.91
AP3S1-202ENST00000395548 MTMR14Q8NCE2 650 aa9.37□□□□□ -0.91
AP3S1-202ENST00000395548 SNRKQ9NRH2 765 aa9.37□□□□□ -0.91
AP3S1-202ENST00000395548 ZNF330Q9Y3S2 320 aaPredicted RBP9.37□□□□□ -0.91
AP3S1-202ENST00000395548 FBXO45P0C2W1 286 aa9.36□□□□□ -0.91
AP3S1-202ENST00000395548 PRM3Q9NNZ6 103 aa9.36□□□□□ -0.91
AP3S1-202ENST00000395548 PCDHB9Q9Y5E1 797 aa9.36□□□□□ -0.91
AP3S1-202ENST00000395548 SCAPERQ9BY12 1400 aa9.36□□□□□ -0.91
AP3S1-202ENST00000395548 ESPNB1AK53 854 aa9.35□□□□□ -0.91
AP3S1-202ENST00000395548 RXRBP28702 533 aa9.35□□□□□ -0.91
AP3S1-202ENST00000395548 RAB15P59190 212 aa9.35□□□□□ -0.91
AP3S1-202ENST00000395548 NR1H3Q13133 447 aa9.35□□□□□ -0.91
AP3S1-202ENST00000395548 CBLBQ13191 982 aa9.35□□□□□ -0.91
AP3S1-202ENST00000395548 CCDC125Q86Z20 511 aa9.35□□□□□ -0.91
AP3S1-202ENST00000395548 AGLP35573 1532 aa9.35□□□□□ -0.91
AP3S1-202ENST00000395548 SOS2Q07890 1332 aaPredicted RBP9.33□□□□□ -0.92
AP3S1-202ENST00000395548 LRRC7Q96NW7 1537 aa9.33□□□□□ -0.92
AP3S1-202ENST00000395548 ERVH48-1M5A8F1 160 aa9.33□□□□□ -0.92
AP3S1-202ENST00000395548 CDK12Q9NYV4 1490 aaPredicted RBP9.33□□□□□ -0.92
AP3S1-202ENST00000395548 RNF17Q9BXT8 1623 aaKnown RBP9.32□□□□□ -0.92
AP3S1-202ENST00000395548 SOBPA7XYQ1 873 aa9.32□□□□□ -0.92
AP3S1-202ENST00000395548 RNF20Q5VTR2 975 aa9.32□□□□□ -0.92
AP3S1-202ENST00000395548 TMPRSS4Q9NRS4 437 aa9.32□□□□□ -0.92
AP3S1-202ENST00000395548 FAM135BQ49AJ0 1406 aa9.31□□□□□ -0.92
AP3S1-202ENST00000395548 PLEKHD1A6NEE1 506 aa9.31□□□□□ -0.92
AP3S1-202ENST00000395548 TTLL8A6PVC2 850 aa9.31□□□□□ -0.92
AP3S1-202ENST00000395548 SPINT1O43278 529 aa9.31□□□□□ -0.92
AP3S1-202ENST00000395548 ZNF784Q8NCA9 323 aaPredicted RBP9.31□□□□□ -0.92
AP3S1-202ENST00000395548 IRF7Q92985 503 aa9.31□□□□□ -0.92
AP3S1-202ENST00000395548 ZNF142P52746 1687 aaPredicted RBP9.31□□□□□ -0.92
AP3S1-202ENST00000395548 SUPT6HQ7KZ85 1726 aaKnown RBP9.31□□□□□ -0.92
AP3S1-202ENST00000395548 CEP170BQ9Y4F5 1589 aaPredicted RBP9.3□□□□□ -0.92
AP3S1-202ENST00000395548 ZMYM3Q14202 1370 aa9.3□□□□□ -0.92
AP3S1-202ENST00000395548 GIGYF1O75420 1035 aaPredicted RBP9.3□□□□□ -0.92
AP3S1-202ENST00000395548 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.3□□□□□ -0.92
AP3S1-202ENST00000395548 REREQ9P2R6 1566 aa9.29□□□□□ -0.92
AP3S1-202ENST00000395548 H3BM21 787 aa9.29□□□□□ -0.92
AP3S1-202ENST00000395548 WIPF1O43516 503 aa9.29□□□□□ -0.92
AP3S1-202ENST00000395548 MEX3CQ5U5Q3 659 aaKnown RBP9.29□□□□□ -0.92
AP3S1-202ENST00000395548 ANKLE2Q86XL3 938 aa9.29□□□□□ -0.92
AP3S1-202ENST00000395548 AGBL1Q96MI9 1066 aa9.29□□□□□ -0.92
AP3S1-202ENST00000395548 ARXQ96QS3 562 aa9.29□□□□□ -0.92
AP3S1-202ENST00000395548 LILRA1O75019 489 aa9.28□□□□□ -0.92
AP3S1-202ENST00000395548 ADH1AP07327 375 aa9.28□□□□□ -0.92
AP3S1-202ENST00000395548 YY1P25490 414 aa9.28□□□□□ -0.92
AP3S1-202ENST00000395548 RELBQ01201 579 aa9.28□□□□□ -0.92
AP3S1-202ENST00000395548 DNMT3LQ9UJW3 386 aa9.28□□□□□ -0.92
AP3S1-202ENST00000395548 SETBP1Q9Y6X0 1596 aa9.28□□□□□ -0.92
AP3S1-202ENST00000395548 ZNF518AQ6AHZ1 1483 aa9.28□□□□□ -0.92
AP3S1-202ENST00000395548 GPR37L1O60883 481 aa9.27□□□□□ -0.93
AP3S1-202ENST00000395548 VEGFBP49765 207 aa9.27□□□□□ -0.93
AP3S1-202ENST00000395548 INSM1Q01101 510 aaPredicted RBP9.27□□□□□ -0.93
AP3S1-202ENST00000395548 VWDEQ8N2E2 1590 aa9.27□□□□□ -0.93
AP3S1-202ENST00000395548 MYO3AQ8NEV4 1616 aa9.27□□□□□ -0.93
AP3S1-202ENST00000395548 MROH2AA6NES4 1674 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms