RNA–Protein interactions for RNA: ENST00000395460.6

C11orf49-204, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 1 (best) BASIC

Gene C11orf49, Length 1,916 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-204ENST00000395460 MIS18AQ9NYP9 233 aa20.35■□□□□ 0.85
C11orf49-204ENST00000395460 FLIIQ13045 1269 aa20.35■□□□□ 0.85
C11orf49-204ENST00000395460 SLC4A10Q6U841 1118 aa20.35■□□□□ 0.85
C11orf49-204ENST00000395460 IL17RAQ96F46 866 aa20.35■□□□□ 0.85
C11orf49-204ENST00000395460 DDX49Q9Y6V7 483 aaKnown RBP20.35■□□□□ 0.85
C11orf49-204ENST00000395460 XRN1Q8IZH2 1706 aaKnown RBP20.34■□□□□ 0.85
C11orf49-204ENST00000395460 GNAT3A8MTJ3 354 aa20.34■□□□□ 0.85
C11orf49-204ENST00000395460 F6X3S4 739 aa20.34■□□□□ 0.85
C11orf49-204ENST00000395460 EPB41L2O43491 1005 aaKnown RBP20.34■□□□□ 0.85
C11orf49-204ENST00000395460 NGDNQ8NEJ9 315 aaKnown RBP20.34■□□□□ 0.85
C11orf49-204ENST00000395460 LRRCC1Q9C099 1032 aa20.34■□□□□ 0.85
C11orf49-204ENST00000395460 ZNF445P59923 1031 aa20.33■□□□□ 0.85
C11orf49-204ENST00000395460 ATP8B2P98198 1209 aa20.33■□□□□ 0.85
C11orf49-204ENST00000395460 SLC26A8Q96RN1 970 aa20.33■□□□□ 0.85
C11orf49-204ENST00000395460 SRCIN1Q9C0H9 1055 aa20.33■□□□□ 0.85
C11orf49-204ENST00000395460 NWD1Q149M9 1564 aa20.33■□□□□ 0.85
C11orf49-204ENST00000395460 CACNA1FO60840 1977 aa20.33■□□□□ 0.85
C11orf49-204ENST00000395460 AOX1Q06278 1338 aa20.33■□□□□ 0.85
C11orf49-204ENST00000395460 ANAPC15P60006 121 aa20.33■□□□□ 0.84
C11orf49-204ENST00000395460 STAP2Q9UGK3 403 aa20.33■□□□□ 0.84
C11orf49-204ENST00000395460 TUBGCP6Q96RT7 1819 aa20.32■□□□□ 0.84
C11orf49-204ENST00000395460 APBB1O00213 710 aa20.32■□□□□ 0.84
C11orf49-204ENST00000395460 MAP3K5Q99683 1374 aa20.31■□□□□ 0.84
C11orf49-204ENST00000395460 ESPNB1AK53 854 aa20.31■□□□□ 0.84
C11orf49-204ENST00000395460 SOX12O15370 315 aa20.31■□□□□ 0.84
C11orf49-204ENST00000395460 CCDC173Q0VFZ6 552 aa20.31■□□□□ 0.84
C11orf49-204ENST00000395460 PPP1R9BQ96SB3 815 aa20.31■□□□□ 0.84
C11orf49-204ENST00000395460 LMBRD1Q9NUN5 540 aa20.31■□□□□ 0.84
C11orf49-204ENST00000395460 MX1P20591 662 aa20.3■□□□□ 0.84
C11orf49-204ENST00000395460 MCCP23508 829 aa20.3■□□□□ 0.84
C11orf49-204ENST00000395460 ESYT1Q9BSJ8 1104 aa20.3■□□□□ 0.84
C11orf49-204ENST00000395460 HOXC9P31274 260 aa20.29■□□□□ 0.84
C11orf49-204ENST00000395460 FKBP5Q13451 457 aaPredicted RBP20.29■□□□□ 0.84
C11orf49-204ENST00000395460 TRIM44Q96DX7 344 aaPredicted RBP20.29■□□□□ 0.84
C11orf49-204ENST00000395460 EXOC6BQ9Y2D4 811 aa20.29■□□□□ 0.84
C11orf49-204ENST00000395460 TAF7Q15545 349 aaPredicted RBP20.28■□□□□ 0.84
C11orf49-204ENST00000395460 MCTP1Q6DN14 999 aa20.28■□□□□ 0.84
C11orf49-204ENST00000395460 MARF1Q9Y4F3 1742 aaKnown RBP20.28■□□□□ 0.84
C11orf49-204ENST00000395460 NASPP49321 788 aaPredicted RBP20.27■□□□□ 0.84
C11orf49-204ENST00000395460 NLRP6P59044 892 aa20.27■□□□□ 0.84
C11orf49-204ENST00000395460 CUL4AQ13619 759 aa20.27■□□□□ 0.84
C11orf49-204ENST00000395460 CHMP4AQ9BY43 222 aa20.27■□□□□ 0.84
C11orf49-204ENST00000395460 THEMISQ8N1K5 641 aaPredicted RBP20.26■□□□□ 0.83
C11orf49-204ENST00000395460 ZGPATQ8N5A5 531 aaKnown RBP20.26■□□□□ 0.83
C11orf49-204ENST00000395460 INTS4Q96HW7 963 aaKnown RBP20.26■□□□□ 0.83
C11orf49-204ENST00000395460 PNMA6EA0A0J9YXQ4 647 aa20.25■□□□□ 0.83
C11orf49-204ENST00000395460 CHMLP26374 656 aa20.25■□□□□ 0.83
C11orf49-204ENST00000395460 IL17REQ8NFR9 667 aa20.25■□□□□ 0.83
C11orf49-204ENST00000395460 ANP32BQ92688 251 aaKnown RBP20.25■□□□□ 0.83
C11orf49-204ENST00000395460 ZDHHC9Q9Y397 364 aa20.25■□□□□ 0.83
C11orf49-204ENST00000395460 RGPD8O14715 1765 aaPredicted RBP20.25■□□□□ 0.83
C11orf49-204ENST00000395460 RAB11FIP3O75154 756 aa20.25■□□□□ 0.83
C11orf49-204ENST00000395460 PKP1Q13835 747 aa20.25■□□□□ 0.83
C11orf49-204ENST00000395460 SSH3Q8TE77 659 aa20.25■□□□□ 0.83
C11orf49-204ENST00000395460 HOXB7P09629 217 aa20.24■□□□□ 0.83
C11orf49-204ENST00000395460 TMX3Q96JJ7 454 aa20.24■□□□□ 0.83
C11orf49-204ENST00000395460 CEMIPQ8WUJ3 1361 aa20.24■□□□□ 0.83
C11orf49-204ENST00000395460 NEK4P51957 841 aa20.23■□□□□ 0.83
C11orf49-204ENST00000395460 PLPPR3Q6T4P5 718 aa20.23■□□□□ 0.83
C11orf49-204ENST00000395460 USP44Q9H0E7 712 aa20.23■□□□□ 0.83
C11orf49-204ENST00000395460 MED1Q15648 1581 aaPredicted RBP20.23■□□□□ 0.83
C11orf49-204ENST00000395460 ZSCAN23Q3MJ62 389 aa20.23■□□□□ 0.83
C11orf49-204ENST00000395460 LRRFIP2Q9Y608 721 aaKnown RBP20.23■□□□□ 0.83
C11orf49-204ENST00000395460 UBTFL1P0CB47 393 aaPredicted RBP20.22■□□□□ 0.83
C11orf49-204ENST00000395460 ERBB4Q15303 1308 aa20.22■□□□□ 0.83
C11orf49-204ENST00000395460 POLA2Q14181 598 aa20.21■□□□□ 0.83
C11orf49-204ENST00000395460 HS1BP3Q53T59 392 aa20.21■□□□□ 0.83
C11orf49-204ENST00000395460 CAVIN1Q6NZI2 390 aaKnown RBP20.21■□□□□ 0.83
C11orf49-204ENST00000395460 BRD1O95696 1058 aa20.2■□□□□ 0.82
C11orf49-204ENST00000395460 MBD3O95983 291 aa20.2■□□□□ 0.82
C11orf49-204ENST00000395460 CEBPAP49715 358 aaPredicted RBP20.2■□□□□ 0.82
C11orf49-204ENST00000395460 HDGFL1Q5TGJ6 251 aa20.19■□□□□ 0.82
C11orf49-204ENST00000395460 AK9Q5TCS8 1911 aa20.19■□□□□ 0.82
C11orf49-204ENST00000395460 TRIM6-TRIM34B2RNG4 842 aa20.19■□□□□ 0.82
C11orf49-204ENST00000395460 ANO2Q9NQ90 1003 aa20.19■□□□□ 0.82
C11orf49-204ENST00000395460 PRPF40AO75400 957 aaKnown RBP20.18■□□□□ 0.82
C11orf49-204ENST00000395460 GPT2Q8TD30 523 aa20.18■□□□□ 0.82
C11orf49-204ENST00000395460 TSHZ3Q63HK5 1081 aa20.17■□□□□ 0.82
C11orf49-204ENST00000395460 ABTB2Q8N961 1025 aa20.17■□□□□ 0.82
C11orf49-204ENST00000395460 ADGRL3Q9HAR2 1447 aa20.17■□□□□ 0.82
C11orf49-204ENST00000395460 RILPL2Q969X0 211 aa20.17■□□□□ 0.82
C11orf49-204ENST00000395460 PALD1Q9ULE6 856 aa20.17■□□□□ 0.82
C11orf49-204ENST00000395460 HSPA4P34932 840 aa20.16■□□□□ 0.82
C11orf49-204ENST00000395460 ZSCAN30Q86W11 494 aa20.16■□□□□ 0.82
C11orf49-204ENST00000395460 NCLP19338 710 aaKnown RBP20.15■□□□□ 0.82
C11orf49-204ENST00000395460 IP6K1Q92551 441 aa20.15■□□□□ 0.82
C11orf49-204ENST00000395460 PDLIM2Q96JY6 352 aa20.15■□□□□ 0.82
C11orf49-204ENST00000395460 KCNA6P17658 529 aa20.15■□□□□ 0.82
C11orf49-204ENST00000395460 HSP90AB4PQ58FF6 505 aa20.15■□□□□ 0.82
C11orf49-204ENST00000395460 KIF1BPQ96EK5 621 aa20.15■□□□□ 0.82
C11orf49-204ENST00000395460 USP42Q9H9J4 1324 aaKnown RBP20.15■□□□□ 0.82
C11orf49-204ENST00000395460 NFAT5O94916 1531 aa20.15■□□□□ 0.82
C11orf49-204ENST00000395460 PHRF1Q9P1Y6 1649 aaKnown RBP20.14■□□□□ 0.82
C11orf49-204ENST00000395460 PLEKHG5O94827 1062 aa20.14■□□□□ 0.81
C11orf49-204ENST00000395460 EIF4A1P60842 406 aaKnown RBP20.14■□□□□ 0.81
C11orf49-204ENST00000395460 LRSAM1Q6UWE0 723 aa20.14■□□□□ 0.81
C11orf49-204ENST00000395460 PPP1R42Q7Z4L9 355 aa20.14■□□□□ 0.81
C11orf49-204ENST00000395460 NECTIN2Q92692 538 aa20.14■□□□□ 0.81
C11orf49-204ENST00000395460 NAP1L5Q96NT1 182 aaPredicted RBP20.14■□□□□ 0.81
C11orf49-204ENST00000395460 KDM3BQ7LBC6 1761 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms