RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 NBPF4Q96M43 638 aa12.94□□□□□ -0.34
HIF1A-203ENST00000394997 SPRYD3Q8NCJ5 442 aa12.94□□□□□ -0.34
HIF1A-203ENST00000394997 IP6K1Q92551 441 aa12.94□□□□□ -0.34
HIF1A-203ENST00000394997 GCC1Q96CN9 775 aa12.94□□□□□ -0.34
HIF1A-203ENST00000394997 MIS18AQ9NYP9 233 aa12.94□□□□□ -0.34
HIF1A-203ENST00000394997 IPO8O15397 1037 aaKnown RBP12.93□□□□□ -0.34
HIF1A-203ENST00000394997 BABAM1Q9NWV8 329 aa12.93□□□□□ -0.34
HIF1A-203ENST00000394997 PLEKHG2Q9H7P9 1386 aa12.93□□□□□ -0.34
HIF1A-203ENST00000394997 MEGF6O75095 1541 aa12.93□□□□□ -0.34
HIF1A-203ENST00000394997 ELL2O00472 640 aaPredicted RBP12.93□□□□□ -0.34
HIF1A-203ENST00000394997 OTUD7AQ8TE49 926 aaPredicted RBP12.93□□□□□ -0.34
HIF1A-203ENST00000394997 GZF1Q9H116 711 aaPredicted RBP12.93□□□□□ -0.34
HIF1A-203ENST00000394997 MEIS3Q99687 375 aa12.92□□□□□ -0.34
HIF1A-203ENST00000394997 AXIN2Q9Y2T1 843 aa12.92□□□□□ -0.34
HIF1A-203ENST00000394997 PLEKHG5O94827 1062 aa12.92□□□□□ -0.34
HIF1A-203ENST00000394997 ARHGEF25Q86VW2 580 aa12.92□□□□□ -0.34
HIF1A-203ENST00000394997 ADCY9O60503 1353 aa12.91□□□□□ -0.34
HIF1A-203ENST00000394997 LRP10Q7Z4F1 713 aa12.91□□□□□ -0.34
HIF1A-203ENST00000394997 OSBPL3Q9H4L5 887 aa12.91□□□□□ -0.34
HIF1A-203ENST00000394997 ITGB4P16144 1822 aa12.91□□□□□ -0.34
HIF1A-203ENST00000394997 KCPQ6ZWJ8 1503 aa12.91□□□□□ -0.34
HIF1A-203ENST00000394997 C16orf71Q8IYS4 520 aaPredicted RBP12.91□□□□□ -0.34
HIF1A-203ENST00000394997 SOS1Q07889 1333 aaPredicted RBP12.9□□□□□ -0.34
HIF1A-203ENST00000394997 PHF8Q9UPP1 1060 aa12.9□□□□□ -0.34
HIF1A-203ENST00000394997 CICQ96RK0 1608 aaPredicted RBP12.9□□□□□ -0.34
HIF1A-203ENST00000394997 SNX21Q969T3 373 aa12.9□□□□□ -0.34
HIF1A-203ENST00000394997 RBM33Q96EV2 1170 aaKnown RBP12.9□□□□□ -0.34
HIF1A-203ENST00000394997 COL16A1Q07092 1604 aaPredicted RBP12.89□□□□□ -0.35
HIF1A-203ENST00000394997 TBC1D9Q6ZT07 1266 aa12.89□□□□□ -0.35
HIF1A-203ENST00000394997 UPF2Q9HAU5 1272 aaKnown RBP12.89□□□□□ -0.35
HIF1A-203ENST00000394997 LNPKQ9C0E8 428 aa12.89□□□□□ -0.35
HIF1A-203ENST00000394997 COL22A1Q8NFW1 1626 aaPredicted RBP12.89□□□□□ -0.35
HIF1A-203ENST00000394997 FRAT2O75474 233 aaPredicted RBP12.89□□□□□ -0.35
HIF1A-203ENST00000394997 ORAI2Q96SN7 254 aa12.89□□□□□ -0.35
HIF1A-203ENST00000394997 API5Q9BZZ5 524 aaKnown RBP12.89□□□□□ -0.35
HIF1A-203ENST00000394997 LAMA4Q16363 1823 aa12.89□□□□□ -0.35
HIF1A-203ENST00000394997 RREB1Q92766 1687 aa12.89□□□□□ -0.35
HIF1A-203ENST00000394997 LGR6Q9HBX8 967 aa12.87□□□□□ -0.35
HIF1A-203ENST00000394997 EIF4A1P60842 406 aaKnown RBP12.87□□□□□ -0.35
HIF1A-203ENST00000394997 TTC22Q5TAA0 569 aa12.87□□□□□ -0.35
HIF1A-203ENST00000394997 ANKLE2Q86XL3 938 aa12.87□□□□□ -0.35
HIF1A-203ENST00000394997 C22orf23Q9BZE7 217 aa12.86□□□□□ -0.35
HIF1A-203ENST00000394997 GNAT3A8MTJ3 354 aa12.86□□□□□ -0.35
HIF1A-203ENST00000394997 NLRP6P59044 892 aa12.86□□□□□ -0.35
HIF1A-203ENST00000394997 PKNOX2Q96KN3 472 aa12.86□□□□□ -0.35
HIF1A-203ENST00000394997 KCNQ3O43525 872 aa12.86□□□□□ -0.35
HIF1A-203ENST00000394997 POLA2Q14181 598 aa12.86□□□□□ -0.35
HIF1A-203ENST00000394997 ANKRD36CQ5JPF3 1778 aa12.85□□□□□ -0.35
HIF1A-203ENST00000394997 PDIA6Q15084 440 aa12.85□□□□□ -0.35
HIF1A-203ENST00000394997 NRAPQ86VF7 1730 aa12.85□□□□□ -0.35
HIF1A-203ENST00000394997 PNMA6EA0A0J9YXQ4 647 aa12.85□□□□□ -0.35
HIF1A-203ENST00000394997 BECN1Q14457 450 aa12.85□□□□□ -0.35
HIF1A-203ENST00000394997 NUTM2GQ5VZR2 741 aa12.85□□□□□ -0.35
HIF1A-203ENST00000394997 USHBP1Q8N6Y0 703 aa12.85□□□□□ -0.35
HIF1A-203ENST00000394997 GAS2L2Q8NHY3 880 aa12.85□□□□□ -0.35
HIF1A-203ENST00000394997 UBE2Q2Q8WVN8 375 aa12.85□□□□□ -0.35
HIF1A-203ENST00000394997 TRIM44Q96DX7 344 aaPredicted RBP12.85□□□□□ -0.35
HIF1A-203ENST00000394997 ARID3AQ99856 593 aa12.85□□□□□ -0.35
HIF1A-203ENST00000394997 USP44Q9H0E7 712 aa12.85□□□□□ -0.35
HIF1A-203ENST00000394997 IL25Q9H293 177 aa12.85□□□□□ -0.35
HIF1A-203ENST00000394997 F6X3S4 739 aa12.84□□□□□ -0.35
HIF1A-203ENST00000394997 HSP90AA1P07900 732 aaKnown RBP12.84□□□□□ -0.35
HIF1A-203ENST00000394997 PHLPP1O60346 1717 aa12.84□□□□□ -0.35
HIF1A-203ENST00000394997 A0A1B0GUL6 1792 aa12.84□□□□□ -0.35
HIF1A-203ENST00000394997 SLC4A2P04920 1241 aa12.84□□□□□ -0.35
HIF1A-203ENST00000394997 RPAP2Q8IXW5 612 aaPredicted RBP12.84□□□□□ -0.35
HIF1A-203ENST00000394997 NGDNQ8NEJ9 315 aaKnown RBP12.84□□□□□ -0.35
HIF1A-203ENST00000394997 ABTB2Q8N961 1025 aa12.83□□□□□ -0.35
HIF1A-203ENST00000394997 CLEC17AQ6ZS10 378 aa12.83□□□□□ -0.36
HIF1A-203ENST00000394997 MYH15Q9Y2K3 1946 aa12.83□□□□□ -0.36
HIF1A-203ENST00000394997 CPDO75976 1380 aa12.83□□□□□ -0.36
HIF1A-203ENST00000394997 UTYO14607 1347 aa12.83□□□□□ -0.36
HIF1A-203ENST00000394997 CYP2E1P05181 493 aaPredicted RBP12.82□□□□□ -0.36
HIF1A-203ENST00000394997 LRRC59Q96AG4 307 aaKnown RBP12.82□□□□□ -0.36
HIF1A-203ENST00000394997 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.82□□□□□ -0.36
HIF1A-203ENST00000394997 ERBB3P21860 1342 aa12.82□□□□□ -0.36
HIF1A-203ENST00000394997 KAZALD1Q96I82 304 aa12.82□□□□□ -0.36
HIF1A-203ENST00000394997 TMEM94Q12767 1356 aa12.82□□□□□ -0.36
HIF1A-203ENST00000394997 FLIIQ13045 1269 aa12.82□□□□□ -0.36
HIF1A-203ENST00000394997 PHAXQ9H814 394 aaKnown RBP12.82□□□□□ -0.36
HIF1A-203ENST00000394997 USP26Q9BXU7 913 aa12.82□□□□□ -0.36
HIF1A-203ENST00000394997 TNS3Q68CZ2 1445 aa12.81□□□□□ -0.36
HIF1A-203ENST00000394997 GCP02774 474 aa12.81□□□□□ -0.36
HIF1A-203ENST00000394997 HSP90AA2PQ14568 343 aaPredicted RBP12.81□□□□□ -0.36
HIF1A-203ENST00000394997 STAP2Q9UGK3 403 aa12.81□□□□□ -0.36
HIF1A-203ENST00000394997 USP42Q9H9J4 1324 aaKnown RBP12.81□□□□□ -0.36
HIF1A-203ENST00000394997 BEND3Q5T5X7 828 aa12.81□□□□□ -0.36
HIF1A-203ENST00000394997 RBM42Q9BTD8 480 aaKnown RBP12.81□□□□□ -0.36
HIF1A-203ENST00000394997 NWD2Q9ULI1 1742 aa12.81□□□□□ -0.36
HIF1A-203ENST00000394997 HOXB7P09629 217 aa12.81□□□□□ -0.36
HIF1A-203ENST00000394997 ANKRD45Q5TZF3 282 aa12.81□□□□□ -0.36
HIF1A-203ENST00000394997 TSPYL4Q9UJ04 414 aa12.81□□□□□ -0.36
HIF1A-203ENST00000394997 TAF7Q15545 349 aaPredicted RBP12.8□□□□□ -0.36
HIF1A-203ENST00000394997 TNS2Q63HR2 1409 aa12.8□□□□□ -0.36
HIF1A-203ENST00000394997 SMARCA5O60264 1052 aaPredicted RBP12.8□□□□□ -0.36
HIF1A-203ENST00000394997 SSH3Q8TE77 659 aa12.8□□□□□ -0.36
HIF1A-203ENST00000394997 PRAMEF22A3QJZ6 481 aa12.8□□□□□ -0.36
HIF1A-203ENST00000394997 SDSP20132 328 aa12.8□□□□□ -0.36
HIF1A-203ENST00000394997 ARAP2Q8WZ64 1704 aa12.79□□□□□ -0.36
HIF1A-203ENST00000394997 LRP6O75581 1613 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms