RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 MMP10P09238 476 aa22.08■■□□□ 1.13
SNCA-205ENST00000394991 KDRP35968 1356 aa22.08■■□□□ 1.12
SNCA-205ENST00000394991 C4AP0C0L4 1744 aa22.08■■□□□ 1.12
SNCA-205ENST00000394991 ATP6V1AP38606 617 aa22.07■■□□□ 1.12
SNCA-205ENST00000394991 WASHC2AQ641Q2 1341 aa22.06■■□□□ 1.12
SNCA-205ENST00000394991 C10orf71Q711Q0 1435 aa22.06■■□□□ 1.12
SNCA-205ENST00000394991 PPM1GO15355 546 aaPredicted RBP22.06■■□□□ 1.12
SNCA-205ENST00000394991 PHKG2P15735 406 aa22.06■■□□□ 1.12
SNCA-205ENST00000394991 ATG3Q9NT62 314 aa22.06■■□□□ 1.12
SNCA-205ENST00000394991 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.06■■□□□ 1.12
SNCA-205ENST00000394991 MYH14Q7Z406 1995 aaKnown RBP22.06■■□□□ 1.12
SNCA-205ENST00000394991 ARFGEF1Q9Y6D6 1849 aa22.05■■□□□ 1.12
SNCA-205ENST00000394991 IFNL2Q8IZJ0 200 aa22.04■■□□□ 1.12
SNCA-205ENST00000394991 CDCA8Q53HL2 280 aa22.03■■□□□ 1.12
SNCA-205ENST00000394991 SLC4A9Q96Q91 983 aa22.03■■□□□ 1.12
SNCA-205ENST00000394991 WDR90Q96KV7 1748 aa22.02■■□□□ 1.12
SNCA-205ENST00000394991 A0A0G2JLW4 131 aa22.01■■□□□ 1.11
SNCA-205ENST00000394991 BCS1LQ9Y276 419 aa22.01■■□□□ 1.11
SNCA-205ENST00000394991 APLP1P51693 650 aa22■■□□□ 1.11
SNCA-205ENST00000394991 TGFB2P61812 414 aa22■■□□□ 1.11
SNCA-205ENST00000394991 POLKQ9UBT6 870 aa22■■□□□ 1.11
SNCA-205ENST00000394991 RTCBQ9Y3I0 505 aaKnown RBP21.99■■□□□ 1.11
SNCA-205ENST00000394991 TOMM70O94826 608 aa21.98■■□□□ 1.11
SNCA-205ENST00000394991 DPEP1P16444 411 aa21.98■■□□□ 1.11
SNCA-205ENST00000394991 TRAPPC3LQ5T215 181 aa21.98■■□□□ 1.11
SNCA-205ENST00000394991 DNAJC5GQ8N7S2 189 aa21.98■■□□□ 1.11
SNCA-205ENST00000394991 NMRK2Q9NPI5 230 aa21.98■■□□□ 1.11
SNCA-205ENST00000394991 GYS1P13807 737 aa21.97■■□□□ 1.11
SNCA-205ENST00000394991 EIF4A2Q14240 407 aaKnown RBP21.97■■□□□ 1.11
SNCA-205ENST00000394991 NLGN1Q8N2Q7 840 aa21.97■■□□□ 1.11
SNCA-205ENST00000394991 ARHGEF1Q92888 912 aaKnown RBP21.97■■□□□ 1.11
SNCA-205ENST00000394991 ARHGAP27Q6ZUM4 889 aa21.96■■□□□ 1.11
SNCA-205ENST00000394991 CNTNAP4Q9C0A0 1308 aa21.96■■□□□ 1.11
SNCA-205ENST00000394991 PLEKHG2Q9H7P9 1386 aa21.96■■□□□ 1.11
SNCA-205ENST00000394991 KDM6AO15550 1401 aaPredicted RBP21.96■■□□□ 1.11
SNCA-205ENST00000394991 TJP1Q07157 1748 aa21.95■■□□□ 1.1
SNCA-205ENST00000394991 SBF1O95248 1867 aa21.95■■□□□ 1.1
SNCA-205ENST00000394991 RC3H1Q5TC82 1133 aaKnown RBP21.95■■□□□ 1.1
SNCA-205ENST00000394991 RBM42Q9BTD8 480 aaKnown RBP21.95■■□□□ 1.1
SNCA-205ENST00000394991 CCDC87Q9NVE4 849 aa21.95■■□□□ 1.1
SNCA-205ENST00000394991 FCHSD2O94868 740 aa21.94■■□□□ 1.1
SNCA-205ENST00000394991 ADRA2BP18089 450 aa21.94■■□□□ 1.1
SNCA-205ENST00000394991 ERVV-2B6SEH9 535 aa21.93■■□□□ 1.1
SNCA-205ENST00000394991 RPS6KA4O75676 772 aa21.93■■□□□ 1.1
SNCA-205ENST00000394991 KCNA3P22001 575 aa21.93■■□□□ 1.1
SNCA-205ENST00000394991 ADAMTS7Q9UKP4 1686 aa21.92■■□□□ 1.1
SNCA-205ENST00000394991 RFC4P35249 363 aa21.91■■□□□ 1.1
SNCA-205ENST00000394991 PARP3Q9Y6F1 533 aa21.91■■□□□ 1.1
SNCA-205ENST00000394991 TNNT2P45379 298 aaPredicted RBP21.9■■□□□ 1.1
SNCA-205ENST00000394991 C9orf131Q5VYM1 1079 aa21.9■■□□□ 1.1
SNCA-205ENST00000394991 DCAF5Q96JK2 942 aa21.9■■□□□ 1.1
SNCA-205ENST00000394991 KCPQ6ZWJ8 1503 aa21.9■■□□□ 1.1
SNCA-205ENST00000394991 TNRC6CQ9HCJ0 1690 aaKnown RBP21.89■■□□□ 1.1
SNCA-205ENST00000394991 SCN11AQ9UI33 1791 aa21.89■■□□□ 1.09
SNCA-205ENST00000394991 RBM46Q8TBY0 533 aaKnown RBP21.88■■□□□ 1.09
SNCA-205ENST00000394991 HSP90AB1P08238 724 aaKnown RBP21.87■■□□□ 1.09
SNCA-205ENST00000394991 HTRA3P83110 453 aa21.87■■□□□ 1.09
SNCA-205ENST00000394991 DDR1Q08345 913 aa21.87■■□□□ 1.09
SNCA-205ENST00000394991 ZNF530Q6P9A1 599 aaPredicted RBP21.87■■□□□ 1.09
SNCA-205ENST00000394991 SRP68Q9UHB9 627 aaKnown RBP21.87■■□□□ 1.09
SNCA-205ENST00000394991 VIRMAQ69YN4 1812 aaKnown RBP21.87■■□□□ 1.09
SNCA-205ENST00000394991 AFDNP55196 1824 aaKnown RBP21.86■■□□□ 1.09
SNCA-205ENST00000394991 CRKLP46109 303 aaKnown RBP21.85■■□□□ 1.09
SNCA-205ENST00000394991 CABP4P57796 275 aa21.85■■□□□ 1.09
SNCA-205ENST00000394991 FKBP8Q14318 412 aa21.85■■□□□ 1.09
SNCA-205ENST00000394991 PLEKHO1Q53GL0 409 aaPredicted RBP21.85■■□□□ 1.09
SNCA-205ENST00000394991 PIM2Q9P1W9 311 aa21.85■■□□□ 1.09
SNCA-205ENST00000394991 USP42Q9H9J4 1324 aaKnown RBP21.84■■□□□ 1.09
SNCA-205ENST00000394991 PTCD1O75127 700 aaKnown RBP21.84■■□□□ 1.09
SNCA-205ENST00000394991 AEBP1Q8IUX7 1158 aa21.83■■□□□ 1.09
SNCA-205ENST00000394991 DLEC1Q9Y238 1755 aa21.83■■□□□ 1.09
SNCA-205ENST00000394991 CCDC88AQ3V6T2 1871 aa21.82■■□□□ 1.08
SNCA-205ENST00000394991 CHRNA5P30532 468 aa21.82■■□□□ 1.08
SNCA-205ENST00000394991 DALRD3Q5D0E6 543 aaKnown RBP21.82■■□□□ 1.08
SNCA-205ENST00000394991 KLRG1Q96E93 195 aa21.82■■□□□ 1.08
SNCA-205ENST00000394991 RNF181Q9P0P0 153 aa21.82■■□□□ 1.08
SNCA-205ENST00000394991 NRXN2Q9P2S2 1712 aa21.81■■□□□ 1.08
SNCA-205ENST00000394991 FSTL1Q12841 308 aa21.81■■□□□ 1.08
SNCA-205ENST00000394991 AMOTQ4VCS5 1084 aa21.81■■□□□ 1.08
SNCA-205ENST00000394991 C16orf71Q8IYS4 520 aaPredicted RBP21.81■■□□□ 1.08
SNCA-205ENST00000394991 POLR3GLQ9BT43 218 aa21.81■■□□□ 1.08
SNCA-205ENST00000394991 MTHFSP49914 203 aa21.8■■□□□ 1.08
SNCA-205ENST00000394991 JMYQ8N9B5 988 aa21.8■■□□□ 1.08
SNCA-205ENST00000394991 NFATC2IPQ8NCF5 419 aa21.8■■□□□ 1.08
SNCA-205ENST00000394991 KDM2BQ8NHM5 1336 aa21.8■■□□□ 1.08
SNCA-205ENST00000394991 POLRMTO00411 1230 aaKnown RBP21.79■■□□□ 1.08
SNCA-205ENST00000394991 INTS5Q6P9B9 1019 aaKnown RBP21.79■■□□□ 1.08
SNCA-205ENST00000394991 TIAM2Q8IVF5 1701 aa21.78■■□□□ 1.08
SNCA-205ENST00000394991 RRAGCQ9HB90 399 aa21.78■■□□□ 1.08
SNCA-205ENST00000394991 TM4SF1P30408 202 aa21.77■■□□□ 1.08
SNCA-205ENST00000394991 C1orf141Q5JVX7 400 aa21.77■■□□□ 1.08
SNCA-205ENST00000394991 COL13A1Q5TAT6 717 aaPredicted RBP21.77■■□□□ 1.08
SNCA-205ENST00000394991 RASSF7Q02833 373 aa21.75■■□□□ 1.07
SNCA-205ENST00000394991 USPL1Q5W0Q7 1092 aa21.74■■□□□ 1.07
SNCA-205ENST00000394991 DNAJC10Q8IXB1 793 aa21.74■■□□□ 1.07
SNCA-205ENST00000394991 MRC1P22897 1456 aa21.74■■□□□ 1.07
SNCA-205ENST00000394991 SOS1Q07889 1333 aaPredicted RBP21.74■■□□□ 1.07
SNCA-205ENST00000394991 PRELPP51888 382 aa21.73■■□□□ 1.07
SNCA-205ENST00000394991 SULT6B1Q6IMI4 303 aa21.73■■□□□ 1.07
SNCA-205ENST00000394991 PANK3Q9H999 370 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms