RNA–Protein interactions for RNA: ENST00000394821.2

SLC6A4-202, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-202ENST00000394821 DDX54Q8TDD1 881 aaKnown RBP21.72■■□□□ 1.07
SLC6A4-202ENST00000394821 TRIM27P14373 513 aa21.71■■□□□ 1.07
SLC6A4-202ENST00000394821 KDM3BQ7LBC6 1761 aa21.71■■□□□ 1.07
SLC6A4-202ENST00000394821 IGHDP01880 384 aa21.71■■□□□ 1.07
SLC6A4-202ENST00000394821 ZKSCAN2Q63HK3 967 aa21.71■■□□□ 1.07
SLC6A4-202ENST00000394821 NECTIN2Q92692 538 aa21.71■■□□□ 1.07
SLC6A4-202ENST00000394821 NFATC2IPQ8NCF5 419 aa21.7■■□□□ 1.06
SLC6A4-202ENST00000394821 C8orf37Q96NL8 207 aa21.7■■□□□ 1.06
SLC6A4-202ENST00000394821 LRP6O75581 1613 aa21.7■■□□□ 1.06
SLC6A4-202ENST00000394821 MS4A1P11836 297 aa21.7■■□□□ 1.06
SLC6A4-202ENST00000394821 SLC39A6Q13433 755 aa21.68■■□□□ 1.06
SLC6A4-202ENST00000394821 EIF4A1P60842 406 aaKnown RBP21.68■■□□□ 1.06
SLC6A4-202ENST00000394821 SLIT2O94813 1529 aa21.67■■□□□ 1.06
SLC6A4-202ENST00000394821 MSH5O43196 834 aa21.67■■□□□ 1.06
SLC6A4-202ENST00000394821 ATF7IPQ6VMQ6 1270 aa21.67■■□□□ 1.06
SLC6A4-202ENST00000394821 ZNF428Q96B54 188 aa21.67■■□□□ 1.06
SLC6A4-202ENST00000394821 SLC52A2Q9HAB3 445 aa21.67■■□□□ 1.06
SLC6A4-202ENST00000394821 PCDH11XQ9BZA7 1347 aa21.67■■□□□ 1.06
SLC6A4-202ENST00000394821 PCDH11YQ9BZA8 1340 aa21.67■■□□□ 1.06
SLC6A4-202ENST00000394821 DZIP1LQ8IYY4 767 aaKnown RBP21.67■■□□□ 1.06
SLC6A4-202ENST00000394821 DCAF5Q96JK2 942 aa21.67■■□□□ 1.06
SLC6A4-202ENST00000394821 BABAM1Q9NWV8 329 aa21.67■■□□□ 1.06
SLC6A4-202ENST00000394821 DISP2A7MBM2 1401 aa21.66■■□□□ 1.06
SLC6A4-202ENST00000394821 PRAMEF22A3QJZ6 481 aa21.66■■□□□ 1.06
SLC6A4-202ENST00000394821 MVPQ14764 893 aaKnown RBP21.66■■□□□ 1.06
SLC6A4-202ENST00000394821 PDE4AP27815 886 aa21.65■■□□□ 1.06
SLC6A4-202ENST00000394821 SPATA31A1Q5TZJ5 1347 aa21.65■■□□□ 1.06
SLC6A4-202ENST00000394821 BRPF1P55201 1214 aaPredicted RBP21.65■■□□□ 1.06
SLC6A4-202ENST00000394821 NGLY1Q96IV0 654 aa21.65■■□□□ 1.06
SLC6A4-202ENST00000394821 PCDHB15Q9Y5E8 787 aa21.65■■□□□ 1.06
SLC6A4-202ENST00000394821 PLEKHG2Q9H7P9 1386 aa21.64■■□□□ 1.05
SLC6A4-202ENST00000394821 KIF16BQ96L93 1317 aa21.64■■□□□ 1.05
SLC6A4-202ENST00000394821 AAMPQ13685 434 aa21.64■■□□□ 1.05
SLC6A4-202ENST00000394821 G2E3Q7L622 706 aa21.64■■□□□ 1.05
SLC6A4-202ENST00000394821 BACH2Q9BYV9 841 aa21.64■■□□□ 1.05
SLC6A4-202ENST00000394821 SLC4A2P04920 1241 aa21.63■■□□□ 1.05
SLC6A4-202ENST00000394821 FTSJ3Q8IY81 847 aaKnown RBP21.63■■□□□ 1.05
SLC6A4-202ENST00000394821 CCDC9Q9Y3X0 531 aaKnown RBP21.63■■□□□ 1.05
SLC6A4-202ENST00000394821 NWD2Q9ULI1 1742 aa21.63■■□□□ 1.05
SLC6A4-202ENST00000394821 BCL9LQ86UU0 1499 aa21.63■■□□□ 1.05
SLC6A4-202ENST00000394821 TMEM57Q8N5G2 664 aa21.63■■□□□ 1.05
SLC6A4-202ENST00000394821 WNK3Q9BYP7 1800 aa21.62■■□□□ 1.05
SLC6A4-202ENST00000394821 EIF2S2P20042 333 aaKnown RBP21.61■■□□□ 1.05
SLC6A4-202ENST00000394821 SPATA31A5Q5VU36 1347 aa21.61■■□□□ 1.05
SLC6A4-202ENST00000394821 SPATA31A7Q8IWB4 1347 aa21.61■■□□□ 1.05
SLC6A4-202ENST00000394821 TOGARAM1Q9Y4F4 1720 aa21.61■■□□□ 1.05
SLC6A4-202ENST00000394821 CABP4P57796 275 aa21.61■■□□□ 1.05
SLC6A4-202ENST00000394821 MRC1P22897 1456 aa21.61■■□□□ 1.05
SLC6A4-202ENST00000394821 HSP90AB1P08238 724 aaKnown RBP21.6■■□□□ 1.05
SLC6A4-202ENST00000394821 NKX1-1Q15270 411 aaPredicted RBP21.6■■□□□ 1.05
SLC6A4-202ENST00000394821 UNC5CLQ8IV45 518 aa21.6■■□□□ 1.05
SLC6A4-202ENST00000394821 SPATA31A6Q5VVP1 1343 aa21.6■■□□□ 1.05
SLC6A4-202ENST00000394821 IPO8O15397 1037 aaKnown RBP21.6■■□□□ 1.05
SLC6A4-202ENST00000394821 ZNF790Q6PG37 636 aa21.6■■□□□ 1.05
SLC6A4-202ENST00000394821 HDGFL1Q5TGJ6 251 aa21.58■■□□□ 1.04
SLC6A4-202ENST00000394821 ITPRIPQ8IWB1 547 aa21.58■■□□□ 1.04
SLC6A4-202ENST00000394821 HEG1Q9ULI3 1381 aa21.57■■□□□ 1.04
SLC6A4-202ENST00000394821 RGS12O14924 1447 aa21.57■■□□□ 1.04
SLC6A4-202ENST00000394821 GIGYF1O75420 1035 aaPredicted RBP21.57■■□□□ 1.04
SLC6A4-202ENST00000394821 ANXA1P04083 346 aa21.57■■□□□ 1.04
SLC6A4-202ENST00000394821 EXOC5O00471 708 aa21.57■■□□□ 1.04
SLC6A4-202ENST00000394821 FNBP4Q8N3X1 1017 aaPredicted RBP21.57■■□□□ 1.04
SLC6A4-202ENST00000394821 ZNF496Q96IT1 587 aaPredicted RBP21.57■■□□□ 1.04
SLC6A4-202ENST00000394821 RGS3P49796 1198 aa21.56■■□□□ 1.04
SLC6A4-202ENST00000394821 CCDC30Q5VVM6 783 aa21.56■■□□□ 1.04
SLC6A4-202ENST00000394821 ARHGAP45Q92619 1136 aa21.56■■□□□ 1.04
SLC6A4-202ENST00000394821 C5P01031 1676 aa21.55■■□□□ 1.04
SLC6A4-202ENST00000394821 PHAXQ9H814 394 aaKnown RBP21.55■■□□□ 1.04
SLC6A4-202ENST00000394821 USP21Q9UK80 565 aa21.55■■□□□ 1.04
SLC6A4-202ENST00000394821 DDX19BQ9UMR2 479 aa21.55■■□□□ 1.04
SLC6A4-202ENST00000394821 F6X3S4 739 aa21.54■■□□□ 1.04
SLC6A4-202ENST00000394821 FAM98CQ17RN3 349 aaKnown RBP21.54■■□□□ 1.04
SLC6A4-202ENST00000394821 CHPF2Q9P2E5 772 aa21.54■■□□□ 1.04
SLC6A4-202ENST00000394821 ERVV-2B6SEH9 535 aa21.54■■□□□ 1.04
SLC6A4-202ENST00000394821 STK31Q9BXU1 1019 aa21.54■■□□□ 1.04
SLC6A4-202ENST00000394821 ABCC4O15439 1325 aa21.54■■□□□ 1.04
SLC6A4-202ENST00000394821 MEX3CQ5U5Q3 659 aaKnown RBP21.53■■□□□ 1.04
SLC6A4-202ENST00000394821 THRAP3Q9Y2W1 955 aaKnown RBP21.53■■□□□ 1.04
SLC6A4-202ENST00000394821 PROSER3Q2NL68 480 aa21.53■■□□□ 1.04
SLC6A4-202ENST00000394821 KAT6BQ8WYB5 2073 aa21.53■■□□□ 1.04
SLC6A4-202ENST00000394821 TNS2Q63HR2 1409 aa21.52■■□□□ 1.04
SLC6A4-202ENST00000394821 VPS72Q15906 364 aa21.52■■□□□ 1.04
SLC6A4-202ENST00000394821 DDB1Q16531 1140 aa21.52■■□□□ 1.04
SLC6A4-202ENST00000394821 ITGB4P16144 1822 aa21.51■■□□□ 1.03
SLC6A4-202ENST00000394821 FLIIQ13045 1269 aa21.51■■□□□ 1.03
SLC6A4-202ENST00000394821 TTC5Q8N0Z6 440 aa21.51■■□□□ 1.03
SLC6A4-202ENST00000394821 MARCH10Q8NA82 808 aaPredicted RBP21.51■■□□□ 1.03
SLC6A4-202ENST00000394821 API5Q9BZZ5 524 aaKnown RBP21.51■■□□□ 1.03
SLC6A4-202ENST00000394821 ZBTB40Q9NUA8 1239 aa21.51■■□□□ 1.03
SLC6A4-202ENST00000394821 GLI3P10071 1580 aa21.51■■□□□ 1.03
SLC6A4-202ENST00000394821 PIGBQ92521 554 aa21.5■■□□□ 1.03
SLC6A4-202ENST00000394821 USP16Q9Y5T5 823 aa21.5■■□□□ 1.03
SLC6A4-202ENST00000394821 SOS1Q07889 1333 aaPredicted RBP21.5■■□□□ 1.03
SLC6A4-202ENST00000394821 HOXB7P09629 217 aa21.5■■□□□ 1.03
SLC6A4-202ENST00000394821 PIP4K2AP48426 406 aaPredicted RBP21.5■■□□□ 1.03
SLC6A4-202ENST00000394821 C8orf34Q49A92 452 aa21.5■■□□□ 1.03
SLC6A4-202ENST00000394821 BARGINQ6ZT62 677 aa21.5■■□□□ 1.03
SLC6A4-202ENST00000394821 RWDD1Q9H446 243 aaPredicted RBP21.5■■□□□ 1.03
SLC6A4-202ENST00000394821 AFF2P51816 1311 aa21.49■■□□□ 1.03
SLC6A4-202ENST00000394821 PTPRCP08575 1304 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms