RNA–Protein interactions for RNA: ENST00000393988.2

KRT41P-201, Transcript of keratin 41 pseudogene, humanhuman

BASIC

Gene KRT41P, Length 1,293 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT41P-201ENST00000393988 SULT6B1Q6IMI4 303 aa16.34■□□□□ 0.21
KRT41P-201ENST00000393988 HSP90AB1P08238 724 aaKnown RBP16.33■□□□□ 0.2
KRT41P-201ENST00000393988 YBX3P16989 372 aaKnown RBP eCLIP16.33■□□□□ 0.2
KRT41P-201ENST00000393988 CABP4P57796 275 aa16.33■□□□□ 0.2
KRT41P-201ENST00000393988 C1orf141Q5JVX7 400 aa16.33■□□□□ 0.2
KRT41P-201ENST00000393988 DCAF5Q96JK2 942 aa16.33■□□□□ 0.2
KRT41P-201ENST00000393988 WWC3Q9ULE0 1092 aa16.33■□□□□ 0.2
KRT41P-201ENST00000393988 KIF7Q2M1P5 1343 aa16.33■□□□□ 0.2
KRT41P-201ENST00000393988 UBR3Q6ZT12 1888 aa16.33■□□□□ 0.2
KRT41P-201ENST00000393988 ERVV-2B6SEH9 535 aa16.32■□□□□ 0.2
KRT41P-201ENST00000393988 SSFA2P28290 1259 aa16.32■□□□□ 0.2
KRT41P-201ENST00000393988 MTHFSP49914 203 aa16.32■□□□□ 0.2
KRT41P-201ENST00000393988 AMOTQ4VCS5 1084 aa16.32■□□□□ 0.2
KRT41P-201ENST00000393988 CD2APQ9Y5K6 639 aa16.31■□□□□ 0.2
KRT41P-201ENST00000393988 GRIN3BO60391 1043 aa16.3■□□□□ 0.2
KRT41P-201ENST00000393988 IL13P35225 146 aa16.3■□□□□ 0.2
KRT41P-201ENST00000393988 AMER1Q5JTC6 1135 aaPredicted RBP16.3■□□□□ 0.2
KRT41P-201ENST00000393988 CC2D1BQ5T0F9 858 aaKnown RBP16.3■□□□□ 0.2
KRT41P-201ENST00000393988 UTRNP46939 3433 aa16.29■□□□□ 0.2
KRT41P-201ENST00000393988 PTCD1O75127 700 aaKnown RBP16.29■□□□□ 0.2
KRT41P-201ENST00000393988 SLC4A9Q96Q91 983 aa16.29■□□□□ 0.2
KRT41P-201ENST00000393988 KDM6AO15550 1401 aaPredicted RBP16.28■□□□□ 0.2
KRT41P-201ENST00000393988 TRAPPC3LQ5T215 181 aa16.28■□□□□ 0.2
KRT41P-201ENST00000393988 NFATC2IPQ8NCF5 419 aa16.28■□□□□ 0.2
KRT41P-201ENST00000393988 RTCBQ9Y3I0 505 aaKnown RBP16.28■□□□□ 0.2
KRT41P-201ENST00000393988 HMOX1P09601 288 aa16.27■□□□□ 0.2
KRT41P-201ENST00000393988 MMP10P09238 476 aa16.26■□□□□ 0.19
KRT41P-201ENST00000393988 KDRP35968 1356 aa16.26■□□□□ 0.19
KRT41P-201ENST00000393988 PLEKHG2Q9H7P9 1386 aa16.26■□□□□ 0.19
KRT41P-201ENST00000393988 RFC4P35249 363 aa16.24■□□□□ 0.19
KRT41P-201ENST00000393988 ARHGEF1Q92888 912 aaKnown RBP16.24■□□□□ 0.19
KRT41P-201ENST00000393988 PER1O15534 1290 aaPredicted RBP16.23■□□□□ 0.19
KRT41P-201ENST00000393988 RC3H1Q5TC82 1133 aaKnown RBP16.23■□□□□ 0.19
KRT41P-201ENST00000393988 LGR6Q9HBX8 967 aa16.23■□□□□ 0.19
KRT41P-201ENST00000393988 DIAPH1O60610 1272 aaKnown RBP16.22■□□□□ 0.19
KRT41P-201ENST00000393988 RPS6KA4O75676 772 aa16.22■□□□□ 0.19
KRT41P-201ENST00000393988 AKAP4Q5JQC9 854 aa16.22■□□□□ 0.19
KRT41P-201ENST00000393988 NLGN1Q8N2Q7 840 aa16.22■□□□□ 0.19
KRT41P-201ENST00000393988 CNTNAP4Q9C0A0 1308 aa16.21■□□□□ 0.19
KRT41P-201ENST00000393988 GIGYF1O75420 1035 aaPredicted RBP16.21■□□□□ 0.19
KRT41P-201ENST00000393988 CRKLP46109 303 aaKnown RBP16.21■□□□□ 0.19
KRT41P-201ENST00000393988 C1QTNF8P60827 252 aa16.21■□□□□ 0.19
KRT41P-201ENST00000393988 GOLGB1Q14789 3259 aaKnown RBP16.21■□□□□ 0.19
KRT41P-201ENST00000393988 SENP3-EIF4A1A0A087X0R7 540 aa16.2■□□□□ 0.18
KRT41P-201ENST00000393988 ADRA2BP18089 450 aa16.2■□□□□ 0.18
KRT41P-201ENST00000393988 SLC39A6Q13433 755 aa16.2■□□□□ 0.18
KRT41P-201ENST00000393988 MYH14Q7Z406 1995 aaKnown RBP16.2■□□□□ 0.18
KRT41P-201ENST00000393988 COL5A3P25940 1745 aaPredicted RBP16.19■□□□□ 0.18
KRT41P-201ENST00000393988 SCN11AQ9UI33 1791 aa16.19■□□□□ 0.18
KRT41P-201ENST00000393988 A0A0G2JLW4 131 aa16.19■□□□□ 0.18
KRT41P-201ENST00000393988 U2SURPO15042 1029 aaKnown RBP16.19■□□□□ 0.18
KRT41P-201ENST00000393988 RNMTO43148 476 aaKnown RBP16.19■□□□□ 0.18
KRT41P-201ENST00000393988 GYS1P13807 737 aa16.19■□□□□ 0.18
KRT41P-201ENST00000393988 MTHFSDQ2M296 383 aaKnown RBP16.19■□□□□ 0.18
KRT41P-201ENST00000393988 ZNF526Q8TF50 670 aaPredicted RBP16.19■□□□□ 0.18
KRT41P-201ENST00000393988 SLC52A2Q9HAB3 445 aa16.19■□□□□ 0.18
KRT41P-201ENST00000393988 SRP68Q9UHB9 627 aaKnown RBP16.19■□□□□ 0.18
KRT41P-201ENST00000393988 PARP3Q9Y6F1 533 aa16.19■□□□□ 0.18
KRT41P-201ENST00000393988 ZNF831Q5JPB2 1677 aa16.18■□□□□ 0.18
KRT41P-201ENST00000393988 DNAJC10Q8IXB1 793 aa16.18■□□□□ 0.18
KRT41P-201ENST00000393988 CICQ96RK0 1608 aaPredicted RBP16.18■□□□□ 0.18
KRT41P-201ENST00000393988 CCDC87Q9NVE4 849 aa16.17■□□□□ 0.18
KRT41P-201ENST00000393988 ATP10DQ9P241 1426 aa16.17■□□□□ 0.18
KRT41P-201ENST00000393988 BCS1LQ9Y276 419 aa16.16■□□□□ 0.18
KRT41P-201ENST00000393988 N4BP2Q86UW6 1770 aaPredicted RBP16.15■□□□□ 0.18
KRT41P-201ENST00000393988 DPEP1P16444 411 aa16.15■□□□□ 0.18
KRT41P-201ENST00000393988 FKBP8Q14318 412 aa16.15■□□□□ 0.18
KRT41P-201ENST00000393988 INTS5Q6P9B9 1019 aaKnown RBP16.15■□□□□ 0.18
KRT41P-201ENST00000393988 C4AP0C0L4 1744 aa16.14■□□□□ 0.17
KRT41P-201ENST00000393988 TJP1Q07157 1748 aa16.14■□□□□ 0.17
KRT41P-201ENST00000393988 TGFB2P61812 414 aa16.14■□□□□ 0.17
KRT41P-201ENST00000393988 GPBP1L1Q9HC44 474 aaPredicted RBP16.14■□□□□ 0.17
KRT41P-201ENST00000393988 PXDNLA1KZ92 1463 aa16.14■□□□□ 0.17
KRT41P-201ENST00000393988 VIRMAQ69YN4 1812 aaKnown RBP16.14■□□□□ 0.17
KRT41P-201ENST00000393988 ZPR1O75312 459 aa16.13■□□□□ 0.17
KRT41P-201ENST00000393988 USP42Q9H9J4 1324 aaKnown RBP16.13■□□□□ 0.17
KRT41P-201ENST00000393988 FCHSD2O94868 740 aa16.12■□□□□ 0.17
KRT41P-201ENST00000393988 CYP19A1P11511 503 aaPredicted RBP16.12■□□□□ 0.17
KRT41P-201ENST00000393988 USPL1Q5W0Q7 1092 aa16.12■□□□□ 0.17
KRT41P-201ENST00000393988 ARHGAP27Q6ZUM4 889 aa16.12■□□□□ 0.17
KRT41P-201ENST00000393988 C10orf71Q711Q0 1435 aa16.11■□□□□ 0.17
KRT41P-201ENST00000393988 DDR1Q08345 913 aa16.11■□□□□ 0.17
KRT41P-201ENST00000393988 TTC5Q8N0Z6 440 aa16.11■□□□□ 0.17
KRT41P-201ENST00000393988 NPC1L1Q9UHC9 1359 aa16.11■□□□□ 0.17
KRT41P-201ENST00000393988 KIF13BQ9NQT8 1826 aa16.1■□□□□ 0.17
KRT41P-201ENST00000393988 CANXP27824 592 aaKnown RBP16.1■□□□□ 0.17
KRT41P-201ENST00000393988 TEFQ10587 303 aa16.1■□□□□ 0.17
KRT41P-201ENST00000393988 CFAP53Q96M91 514 aa16.1■□□□□ 0.17
KRT41P-201ENST00000393988 COL3A1P02461 1466 aaPredicted RBP16.1■□□□□ 0.17
KRT41P-201ENST00000393988 GNAT3A8MTJ3 354 aa16.09■□□□□ 0.17
KRT41P-201ENST00000393988 IL17REQ8NFR9 667 aa16.09■□□□□ 0.17
KRT41P-201ENST00000393988 GAS2L2Q8NHY3 880 aa16.09■□□□□ 0.17
KRT41P-201ENST00000393988 ZBTB1Q9Y2K1 713 aa16.09■□□□□ 0.17
KRT41P-201ENST00000393988 SOS1Q07889 1333 aaPredicted RBP16.09■□□□□ 0.17
KRT41P-201ENST00000393988 MRC1P22897 1456 aa16.09■□□□□ 0.17
KRT41P-201ENST00000393988 KIAA1551Q9HCM1 1747 aa16.08■□□□□ 0.17
KRT41P-201ENST00000393988 CHRNA5P30532 468 aa16.08■□□□□ 0.16
KRT41P-201ENST00000393988 ZNF330Q9Y3S2 320 aaPredicted RBP16.08■□□□□ 0.16
KRT41P-201ENST00000393988 ADCY9O60503 1353 aa16.08■□□□□ 0.16
KRT41P-201ENST00000393988 KCPQ6ZWJ8 1503 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms