RNA–Protein interactions for RNA: ENST00000393794.4

POLR2J-202, Transcript of RNA polymerase II subunit J, humanhuman

TSL 1 (best) BASIC

Gene POLR2J, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J-202ENST00000393794 KDRP35968 1356 aa27.63■■■□□ 2.01
POLR2J-202ENST00000393794 PLEKHG2Q9H7P9 1386 aa27.63■■■□□ 2.01
POLR2J-202ENST00000393794 ZNF831Q5JPB2 1677 aa27.63■■■□□ 2.01
POLR2J-202ENST00000393794 IFNL2Q8IZJ0 200 aa27.63■■■□□ 2.01
POLR2J-202ENST00000393794 GNPATO15228 680 aa27.62■■■□□ 2.01
POLR2J-202ENST00000393794 ATP6V1AP38606 617 aa27.62■■■□□ 2.01
POLR2J-202ENST00000393794 MMP10P09238 476 aa27.61■■■□□ 2.01
POLR2J-202ENST00000393794 SLC4A9Q96Q91 983 aa27.61■■■□□ 2.01
POLR2J-202ENST00000393794 POLKQ9UBT6 870 aa27.61■■■□□ 2.01
POLR2J-202ENST00000393794 TGFB2P61812 414 aa27.6■■■□□ 2.01
POLR2J-202ENST00000393794 C10orf71Q711Q0 1435 aa27.58■■■□□ 2
POLR2J-202ENST00000393794 RC3H1Q5TC82 1133 aaKnown RBP27.57■■■□□ 2
POLR2J-202ENST00000393794 N4BP2Q86UW6 1770 aaPredicted RBP27.57■■■□□ 2
POLR2J-202ENST00000393794 BRCA1P38398 1863 aaKnown RBP27.56■■■□□ 2
POLR2J-202ENST00000393794 PPM1GO15355 546 aaPredicted RBP27.56■■■□□ 2
POLR2J-202ENST00000393794 NLGN1Q8N2Q7 840 aa27.56■■■□□ 2
POLR2J-202ENST00000393794 DNAJC5GQ8N7S2 189 aa27.56■■■□□ 2
POLR2J-202ENST00000393794 COL5A3P25940 1745 aaPredicted RBP27.54■■■□□ 2
POLR2J-202ENST00000393794 TRAPPC3LQ5T215 181 aa27.54■■■□□ 2
POLR2J-202ENST00000393794 MYH14Q7Z406 1995 aaKnown RBP27.53■■■□□ 2
POLR2J-202ENST00000393794 ERVV-2B6SEH9 535 aa27.53■■■□□ 2
POLR2J-202ENST00000393794 ADRA2BP18089 450 aa27.53■■■□□ 2
POLR2J-202ENST00000393794 EIF4A2Q14240 407 aaKnown RBP27.53■■■□□ 2
POLR2J-202ENST00000393794 ARHGEF1Q92888 912 aaKnown RBP27.53■■■□□ 2
POLR2J-202ENST00000393794 RTCBQ9Y3I0 505 aaKnown RBP27.53■■■□□ 2
POLR2J-202ENST00000393794 CNTNAP4Q9C0A0 1308 aa27.52■■■□□ 2
POLR2J-202ENST00000393794 A0A0G2JLW4 131 aa27.52■■■□□ 2
POLR2J-202ENST00000393794 TOMM70O94826 608 aa27.52■■■□□ 2
POLR2J-202ENST00000393794 GYS1P13807 737 aa27.52■■■□□ 2
POLR2J-202ENST00000393794 APLP1P51693 650 aa27.52■■■□□ 2
POLR2J-202ENST00000393794 C4AP0C0L4 1744 aa27.51■■□□□ 1.99
POLR2J-202ENST00000393794 KCNA3P22001 575 aa27.51■■□□□ 1.99
POLR2J-202ENST00000393794 RPS6KA4O75676 772 aa27.49■■□□□ 1.99
POLR2J-202ENST00000393794 BCS1LQ9Y276 419 aa27.49■■□□□ 1.99
POLR2J-202ENST00000393794 DPEP1P16444 411 aa27.48■■□□□ 1.99
POLR2J-202ENST00000393794 DCAF5Q96JK2 942 aa27.47■■□□□ 1.99
POLR2J-202ENST00000393794 ARFGEF1Q9Y6D6 1849 aa27.46■■□□□ 1.99
POLR2J-202ENST00000393794 KDM6AO15550 1401 aaPredicted RBP27.46■■□□□ 1.99
POLR2J-202ENST00000393794 NMRK2Q9NPI5 230 aa27.45■■□□□ 1.98
POLR2J-202ENST00000393794 CCDC87Q9NVE4 849 aa27.45■■□□□ 1.98
POLR2J-202ENST00000393794 HSP90AB1P08238 724 aaKnown RBP27.44■■□□□ 1.98
POLR2J-202ENST00000393794 ARHGAP27Q6ZUM4 889 aa27.43■■□□□ 1.98
POLR2J-202ENST00000393794 RBM42Q9BTD8 480 aaKnown RBP27.43■■□□□ 1.98
POLR2J-202ENST00000393794 FCHSD2O94868 740 aa27.41■■□□□ 1.98
POLR2J-202ENST00000393794 RFC4P35249 363 aa27.41■■□□□ 1.98
POLR2J-202ENST00000393794 RBM46Q8TBY0 533 aaKnown RBP27.4■■□□□ 1.98
POLR2J-202ENST00000393794 PARP3Q9Y6F1 533 aa27.4■■□□□ 1.98
POLR2J-202ENST00000393794 PLEKHO1Q53GL0 409 aaPredicted RBP27.39■■□□□ 1.98
POLR2J-202ENST00000393794 ADAMTS7Q9UKP4 1686 aa27.38■■□□□ 1.97
POLR2J-202ENST00000393794 AMOTQ4VCS5 1084 aa27.38■■□□□ 1.97
POLR2J-202ENST00000393794 C9orf131Q5VYM1 1079 aa27.38■■□□□ 1.97
POLR2J-202ENST00000393794 PCNTO95613 3336 aa27.36■■□□□ 1.97
POLR2J-202ENST00000393794 WDR90Q96KV7 1748 aa27.36■■□□□ 1.97
POLR2J-202ENST00000393794 DDR1Q08345 913 aa27.36■■□□□ 1.97
POLR2J-202ENST00000393794 PIM2Q9P1W9 311 aa27.36■■□□□ 1.97
POLR2J-202ENST00000393794 TIMELESSQ9UNS1 1208 aa27.36■■□□□ 1.97
POLR2J-202ENST00000393794 USP42Q9H9J4 1324 aaKnown RBP27.36■■□□□ 1.97
POLR2J-202ENST00000393794 TNNT2P45379 298 aaPredicted RBP27.35■■□□□ 1.97
POLR2J-202ENST00000393794 CABP4P57796 275 aa27.35■■□□□ 1.97
POLR2J-202ENST00000393794 FKBP8Q14318 412 aa27.35■■□□□ 1.97
POLR2J-202ENST00000393794 ZNF530Q6P9A1 599 aaPredicted RBP27.35■■□□□ 1.97
POLR2J-202ENST00000393794 SBF1O95248 1867 aa27.35■■□□□ 1.97
POLR2J-202ENST00000393794 TJP1Q07157 1748 aa27.34■■□□□ 1.97
POLR2J-202ENST00000393794 CRKLP46109 303 aaKnown RBP27.34■■□□□ 1.97
POLR2J-202ENST00000393794 TM4SF1P30408 202 aa27.33■■□□□ 1.97
POLR2J-202ENST00000393794 JMYQ8N9B5 988 aa27.33■■□□□ 1.97
POLR2J-202ENST00000393794 SRP68Q9UHB9 627 aaKnown RBP27.33■■□□□ 1.97
POLR2J-202ENST00000393794 FSTL1Q12841 308 aa27.32■■□□□ 1.96
POLR2J-202ENST00000393794 INTS5Q6P9B9 1019 aaKnown RBP27.32■■□□□ 1.96
POLR2J-202ENST00000393794 NFATC2IPQ8NCF5 419 aa27.32■■□□□ 1.96
POLR2J-202ENST00000393794 PTCD1O75127 700 aaKnown RBP27.31■■□□□ 1.96
POLR2J-202ENST00000393794 MTHFSP49914 203 aa27.31■■□□□ 1.96
POLR2J-202ENST00000393794 DALRD3Q5D0E6 543 aaKnown RBP27.31■■□□□ 1.96
POLR2J-202ENST00000393794 AEBP1Q8IUX7 1158 aa27.31■■□□□ 1.96
POLR2J-202ENST00000393794 POLRMTO00411 1230 aaKnown RBP27.29■■□□□ 1.96
POLR2J-202ENST00000393794 KLRG1Q96E93 195 aa27.29■■□□□ 1.96
POLR2J-202ENST00000393794 KCPQ6ZWJ8 1503 aa27.29■■□□□ 1.96
POLR2J-202ENST00000393794 SCN11AQ9UI33 1791 aa27.27■■□□□ 1.96
POLR2J-202ENST00000393794 CHRNA5P30532 468 aa27.26■■□□□ 1.95
POLR2J-202ENST00000393794 KDM2BQ8NHM5 1336 aa27.25■■□□□ 1.95
POLR2J-202ENST00000393794 HTRA3P83110 453 aa27.25■■□□□ 1.95
POLR2J-202ENST00000393794 PANK3Q9H999 370 aa27.25■■□□□ 1.95
POLR2J-202ENST00000393794 RNF181Q9P0P0 153 aa27.25■■□□□ 1.95
POLR2J-202ENST00000393794 C1orf141Q5JVX7 400 aa27.24■■□□□ 1.95
POLR2J-202ENST00000393794 TNRC6CQ9HCJ0 1690 aaKnown RBP27.24■■□□□ 1.95
POLR2J-202ENST00000393794 RRAGCQ9HB90 399 aa27.23■■□□□ 1.95
POLR2J-202ENST00000393794 NRXN2Q9P2S2 1712 aa27.23■■□□□ 1.95
POLR2J-202ENST00000393794 SOS1Q07889 1333 aaPredicted RBP27.22■■□□□ 1.95
POLR2J-202ENST00000393794 IL13P35225 146 aa27.22■■□□□ 1.95
POLR2J-202ENST00000393794 SULT6B1Q6IMI4 303 aa27.22■■□□□ 1.95
POLR2J-202ENST00000393794 C16orf71Q8IYS4 520 aaPredicted RBP27.22■■□□□ 1.95
POLR2J-202ENST00000393794 ZC3H4Q9UPT8 1303 aaKnown RBP27.21■■□□□ 1.95
POLR2J-202ENST00000393794 AFDNP55196 1824 aaKnown RBP27.21■■□□□ 1.95
POLR2J-202ENST00000393794 PRELPP51888 382 aa27.2■■□□□ 1.94
POLR2J-202ENST00000393794 USPL1Q5W0Q7 1092 aa27.2■■□□□ 1.94
POLR2J-202ENST00000393794 DNAJC10Q8IXB1 793 aa27.2■■□□□ 1.94
POLR2J-202ENST00000393794 CYP19A1P11511 503 aaPredicted RBP27.19■■□□□ 1.94
POLR2J-202ENST00000393794 COL13A1Q5TAT6 717 aaPredicted RBP27.19■■□□□ 1.94
POLR2J-202ENST00000393794 MRC1P22897 1456 aa27.19■■□□□ 1.94
POLR2J-202ENST00000393794 AKAP4Q5JQC9 854 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms