RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 IL2RBP14784 551 aa22.3■■□□□ 1.16
MBD4-202ENST00000393278 TMEM57Q8N5G2 664 aa22.3■■□□□ 1.16
MBD4-202ENST00000393278 EIF4A1P60842 406 aaKnown RBP22.3■■□□□ 1.16
MBD4-202ENST00000393278 API5Q9BZZ5 524 aaKnown RBP22.3■■□□□ 1.16
MBD4-202ENST00000393278 DDX19BQ9UMR2 479 aa22.3■■□□□ 1.16
MBD4-202ENST00000393278 ABCC4O15439 1325 aa22.29■■□□□ 1.16
MBD4-202ENST00000393278 HSP90AB1P08238 724 aaKnown RBP22.29■■□□□ 1.16
MBD4-202ENST00000393278 ITPRIPQ8IWB1 547 aa22.29■■□□□ 1.16
MBD4-202ENST00000393278 ZCRB1Q8TBF4 217 aaKnown RBP22.28■■□□□ 1.16
MBD4-202ENST00000393278 DCAF5Q96JK2 942 aa22.28■■□□□ 1.16
MBD4-202ENST00000393278 MRC1P22897 1456 aa22.28■■□□□ 1.16
MBD4-202ENST00000393278 PCDH11XQ9BZA7 1347 aa22.27■■□□□ 1.16
MBD4-202ENST00000393278 PCDH11YQ9BZA8 1340 aa22.27■■□□□ 1.16
MBD4-202ENST00000393278 CCDC30Q5VVM6 783 aa22.27■■□□□ 1.16
MBD4-202ENST00000393278 CENPQQ7L2Z9 268 aaPredicted RBP22.27■■□□□ 1.16
MBD4-202ENST00000393278 PTPRCP08575 1304 aa22.27■■□□□ 1.16
MBD4-202ENST00000393278 KCNQ3O43525 872 aa22.26■■□□□ 1.15
MBD4-202ENST00000393278 HOXB7P09629 217 aa22.26■■□□□ 1.15
MBD4-202ENST00000393278 SLC52A2Q9HAB3 445 aa22.26■■□□□ 1.15
MBD4-202ENST00000393278 SLC4A2P04920 1241 aa22.26■■□□□ 1.15
MBD4-202ENST00000393278 STK31Q9BXU1 1019 aa22.25■■□□□ 1.15
MBD4-202ENST00000393278 PLCH1Q4KWH8 1693 aa22.25■■□□□ 1.15
MBD4-202ENST00000393278 RGS12O14924 1447 aa22.24■■□□□ 1.15
MBD4-202ENST00000393278 CERKQ8TCT0 537 aa22.24■■□□□ 1.15
MBD4-202ENST00000393278 SHANK3Q9BYB0 1731 aa22.23■■□□□ 1.15
MBD4-202ENST00000393278 ADAMTS2O95450 1211 aa22.23■■□□□ 1.15
MBD4-202ENST00000393278 PCDHB15Q9Y5E8 787 aa22.23■■□□□ 1.15
MBD4-202ENST00000393278 HEG1Q9ULI3 1381 aa22.23■■□□□ 1.15
MBD4-202ENST00000393278 HDGFL1Q5TGJ6 251 aa22.22■■□□□ 1.15
MBD4-202ENST00000393278 CHMP4AQ9BY43 222 aa22.22■■□□□ 1.15
MBD4-202ENST00000393278 USP35Q9P2H5 1018 aa22.22■■□□□ 1.15
MBD4-202ENST00000393278 NKX1-1Q15270 411 aaPredicted RBP22.21■■□□□ 1.15
MBD4-202ENST00000393278 ZBTB40Q9NUA8 1239 aa22.21■■□□□ 1.15
MBD4-202ENST00000393278 DISP2A7MBM2 1401 aa22.21■■□□□ 1.15
MBD4-202ENST00000393278 NRAPQ86VF7 1730 aa22.21■■□□□ 1.15
MBD4-202ENST00000393278 CACNA1FO60840 1977 aa22.21■■□□□ 1.15
MBD4-202ENST00000393278 NFATC2IPQ8NCF5 419 aa22.2■■□□□ 1.15
MBD4-202ENST00000393278 NUTM2BA6NNL0 878 aaPredicted RBP22.2■■□□□ 1.14
MBD4-202ENST00000393278 NUTM2EB1AL46 878 aaPredicted RBP22.2■■□□□ 1.14
MBD4-202ENST00000393278 IGHDP01880 384 aa22.2■■□□□ 1.14
MBD4-202ENST00000393278 G2E3Q7L622 706 aa22.2■■□□□ 1.14
MBD4-202ENST00000393278 NUTM2AQ8IVF1 878 aaPredicted RBP22.2■■□□□ 1.14
MBD4-202ENST00000393278 CHMP4BQ9H444 224 aaKnown RBP22.2■■□□□ 1.14
MBD4-202ENST00000393278 JCADQ9P266 1359 aa22.19■■□□□ 1.14
MBD4-202ENST00000393278 INTS3Q68E01 1043 aaKnown RBP22.19■■□□□ 1.14
MBD4-202ENST00000393278 ZNF790Q6PG37 636 aa22.19■■□□□ 1.14
MBD4-202ENST00000393278 NECTIN2Q92692 538 aa22.19■■□□□ 1.14
MBD4-202ENST00000393278 ZBTB7BO15156 539 aaPredicted RBP22.18■■□□□ 1.14
MBD4-202ENST00000393278 GIGYF1O75420 1035 aaPredicted RBP22.18■■□□□ 1.14
MBD4-202ENST00000393278 FBXO41Q8TF61 875 aa22.17■■□□□ 1.14
MBD4-202ENST00000393278 NWD2Q9ULI1 1742 aa22.17■■□□□ 1.14
MBD4-202ENST00000393278 CABP4P57796 275 aa22.17■■□□□ 1.14
MBD4-202ENST00000393278 FLIIQ13045 1269 aa22.17■■□□□ 1.14
MBD4-202ENST00000393278 SLIT2O94813 1529 aa22.16■■□□□ 1.14
MBD4-202ENST00000393278 EIF2S2P20042 333 aaKnown RBP22.16■■□□□ 1.14
MBD4-202ENST00000393278 SLC39A6Q13433 755 aa22.16■■□□□ 1.14
MBD4-202ENST00000393278 DDX54Q8TDD1 881 aaKnown RBP22.16■■□□□ 1.14
MBD4-202ENST00000393278 TSHZ2Q9NRE2 1034 aa22.16■■□□□ 1.14
MBD4-202ENST00000393278 WNK3Q9BYP7 1800 aa22.15■■□□□ 1.14
MBD4-202ENST00000393278 ERVV-2B6SEH9 535 aa22.15■■□□□ 1.14
MBD4-202ENST00000393278 RWDD1Q9H446 243 aaPredicted RBP22.14■■□□□ 1.14
MBD4-202ENST00000393278 SPATA31A1Q5TZJ5 1347 aa22.13■■□□□ 1.13
MBD4-202ENST00000393278 CHPF2Q9P2E5 772 aa22.13■■□□□ 1.13
MBD4-202ENST00000393278 FKBP5Q13451 457 aaPredicted RBP22.12■■□□□ 1.13
MBD4-202ENST00000393278 TTC5Q8N0Z6 440 aa22.12■■□□□ 1.13
MBD4-202ENST00000393278 THRAP3Q9Y2W1 955 aaKnown RBP22.12■■□□□ 1.13
MBD4-202ENST00000393278 HDAC1Q13547 482 aaPredicted RBP22.11■■□□□ 1.13
MBD4-202ENST00000393278 PRAMEF22A3QJZ6 481 aa22.11■■□□□ 1.13
MBD4-202ENST00000393278 ZNF496Q96IT1 587 aaPredicted RBP22.11■■□□□ 1.13
MBD4-202ENST00000393278 CDCA7Q9BWT1 371 aaPredicted RBP22.11■■□□□ 1.13
MBD4-202ENST00000393278 DBF4Q9UBU7 674 aaPredicted RBP22.11■■□□□ 1.13
MBD4-202ENST00000393278 TOGARAM1Q9Y4F4 1720 aa22.1■■□□□ 1.13
MBD4-202ENST00000393278 C5P01031 1676 aa22.1■■□□□ 1.13
MBD4-202ENST00000393278 F6X3S4 739 aa22.1■■□□□ 1.13
MBD4-202ENST00000393278 CCT4P50991 539 aaKnown RBP22.1■■□□□ 1.13
MBD4-202ENST00000393278 PHAXQ9H814 394 aaKnown RBP22.1■■□□□ 1.13
MBD4-202ENST00000393278 PXDNLA1KZ92 1463 aa22.1■■□□□ 1.13
MBD4-202ENST00000393278 SPATA31A6Q5VVP1 1343 aa22.09■■□□□ 1.13
MBD4-202ENST00000393278 FMNL2Q96PY5 1086 aa22.09■■□□□ 1.13
MBD4-202ENST00000393278 TNS2Q63HR2 1409 aa22.09■■□□□ 1.13
MBD4-202ENST00000393278 SPATA31A5Q5VU36 1347 aa22.08■■□□□ 1.13
MBD4-202ENST00000393278 SPATA31A7Q8IWB4 1347 aa22.08■■□□□ 1.13
MBD4-202ENST00000393278 PAPPAQ13219 1627 aa22.08■■□□□ 1.13
MBD4-202ENST00000393278 GLI3P10071 1580 aa22.08■■□□□ 1.12
MBD4-202ENST00000393278 EXOC5O00471 708 aa22.07■■□□□ 1.12
MBD4-202ENST00000393278 SLC4A10Q6U841 1118 aa22.07■■□□□ 1.12
MBD4-202ENST00000393278 N4BP2Q86UW6 1770 aaPredicted RBP22.07■■□□□ 1.12
MBD4-202ENST00000393278 SNRPA1P09661 255 aaKnown RBP22.07■■□□□ 1.12
MBD4-202ENST00000393278 SKAP1Q86WV1 359 aa22.07■■□□□ 1.12
MBD4-202ENST00000393278 UBR2Q8IWV8 1755 aa22.06■■□□□ 1.12
MBD4-202ENST00000393278 LRP6O75581 1613 aa22.06■■□□□ 1.12
MBD4-202ENST00000393278 UNC5CLQ8IV45 518 aa22.05■■□□□ 1.12
MBD4-202ENST00000393278 C1orf115Q9H7X2 142 aa22.05■■□□□ 1.12
MBD4-202ENST00000393278 DDX21Q9NR30 783 aaKnown RBP eCLIP22.05■■□□□ 1.12
MBD4-202ENST00000393278 ANXA1P04083 346 aa22.04■■□□□ 1.12
MBD4-202ENST00000393278 PROSER3Q2NL68 480 aa22.04■■□□□ 1.12
MBD4-202ENST00000393278 KCPQ6ZWJ8 1503 aa22.04■■□□□ 1.12
MBD4-202ENST00000393278 BARGINQ6ZT62 677 aa22.04■■□□□ 1.12
MBD4-202ENST00000393278 C8orf37Q96NL8 207 aa22.04■■□□□ 1.12
MBD4-202ENST00000393278 HYPKQ9NX55 129 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms