RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 PKD1L3Q7Z443 1732 aa14.84□□□□□ -0.03
TRAF3IP2-208ENST00000392556 RRP9O43818 475 aaKnown RBP14.84□□□□□ -0.03
TRAF3IP2-208ENST00000392556 CYP27B1O15528 508 aa14.84□□□□□ -0.03
TRAF3IP2-208ENST00000392556 PALLDQ8WX93 1383 aa14.83□□□□□ -0.03
TRAF3IP2-208ENST00000392556 POLKQ9UBT6 870 aa14.83□□□□□ -0.04
TRAF3IP2-208ENST00000392556 MPRIPQ6WCQ1 1025 aa14.81□□□□□ -0.04
TRAF3IP2-208ENST00000392556 IFNL2Q8IZJ0 200 aa14.81□□□□□ -0.04
TRAF3IP2-208ENST00000392556 EYA1Q99502 592 aa14.81□□□□□ -0.04
TRAF3IP2-208ENST00000392556 LAS1LQ9Y4W2 734 aaKnown RBP14.81□□□□□ -0.04
TRAF3IP2-208ENST00000392556 HSP90AB1P08238 724 aaKnown RBP14.8□□□□□ -0.04
TRAF3IP2-208ENST00000392556 COL23A1Q86Y22 540 aaPredicted RBP14.8□□□□□ -0.04
TRAF3IP2-208ENST00000392556 C5P01031 1676 aa14.79□□□□□ -0.04
TRAF3IP2-208ENST00000392556 GPR162Q16538 588 aa14.79□□□□□ -0.04
TRAF3IP2-208ENST00000392556 TUBGCP6Q96RT7 1819 aa14.78□□□□□ -0.04
TRAF3IP2-208ENST00000392556 GRIN3BO60391 1043 aa14.78□□□□□ -0.04
TRAF3IP2-208ENST00000392556 KCNQ4P56696 695 aa14.78□□□□□ -0.04
TRAF3IP2-208ENST00000392556 FRAT1Q92837 279 aaPredicted RBP14.78□□□□□ -0.04
TRAF3IP2-208ENST00000392556 AK7Q96M32 723 aa14.78□□□□□ -0.04
TRAF3IP2-208ENST00000392556 TMOD3Q9NYL9 352 aa14.78□□□□□ -0.04
TRAF3IP2-208ENST00000392556 HSPA5P11021 654 aaKnown RBP14.77□□□□□ -0.04
TRAF3IP2-208ENST00000392556 PHKG2P15735 406 aa14.77□□□□□ -0.04
TRAF3IP2-208ENST00000392556 PIGBQ92521 554 aa14.77□□□□□ -0.04
TRAF3IP2-208ENST00000392556 CD2APQ9Y5K6 639 aa14.77□□□□□ -0.04
TRAF3IP2-208ENST00000392556 MAP2P11137 1827 aaKnown RBP14.77□□□□□ -0.05
TRAF3IP2-208ENST00000392556 IGSF1Q8N6C5 1336 aa14.77□□□□□ -0.05
TRAF3IP2-208ENST00000392556 SSFA2P28290 1259 aa14.77□□□□□ -0.05
TRAF3IP2-208ENST00000392556 EIF4A2Q14240 407 aaKnown RBP14.77□□□□□ -0.05
TRAF3IP2-208ENST00000392556 AMOTQ4VCS5 1084 aa14.77□□□□□ -0.05
TRAF3IP2-208ENST00000392556 RNF123Q5XPI4 1314 aa14.76□□□□□ -0.05
TRAF3IP2-208ENST00000392556 ZBED9Q6R2W3 1325 aa14.76□□□□□ -0.05
TRAF3IP2-208ENST00000392556 HSP90AA2PQ14568 343 aaPredicted RBP14.76□□□□□ -0.05
TRAF3IP2-208ENST00000392556 ZNF784Q8NCA9 323 aaPredicted RBP14.76□□□□□ -0.05
TRAF3IP2-208ENST00000392556 CHD4Q14839 1912 aa14.76□□□□□ -0.05
TRAF3IP2-208ENST00000392556 ERVV-2B6SEH9 535 aa14.75□□□□□ -0.05
TRAF3IP2-208ENST00000392556 POLR3GLQ9BT43 218 aa14.75□□□□□ -0.05
TRAF3IP2-208ENST00000392556 PANK3Q9H999 370 aa14.75□□□□□ -0.05
TRAF3IP2-208ENST00000392556 TOGARAM1Q9Y4F4 1720 aa14.75□□□□□ -0.05
TRAF3IP2-208ENST00000392556 LOC102724428A0A0B4J2F2 783 aa14.75□□□□□ -0.05
TRAF3IP2-208ENST00000392556 SIK1P57059 783 aa14.75□□□□□ -0.05
TRAF3IP2-208ENST00000392556 PLEKHO1Q53GL0 409 aaPredicted RBP14.75□□□□□ -0.05
TRAF3IP2-208ENST00000392556 C4BP0C0L5 1744 aa14.74□□□□□ -0.05
TRAF3IP2-208ENST00000392556 ITGB4P16144 1822 aa14.74□□□□□ -0.05
TRAF3IP2-208ENST00000392556 TAF1LQ8IZX4 1826 aa14.74□□□□□ -0.05
TRAF3IP2-208ENST00000392556 KLHL34Q8N239 644 aa14.74□□□□□ -0.05
TRAF3IP2-208ENST00000392556 DCAF5Q96JK2 942 aa14.74□□□□□ -0.05
TRAF3IP2-208ENST00000392556 MORC1Q86VD1 984 aa14.73□□□□□ -0.05
TRAF3IP2-208ENST00000392556 KNSTRNQ9Y448 316 aa14.73□□□□□ -0.05
TRAF3IP2-208ENST00000392556 TCERG1O14776 1098 aaKnown RBP14.73□□□□□ -0.05
TRAF3IP2-208ENST00000392556 DDRGK1Q96HY6 314 aa14.73□□□□□ -0.05
TRAF3IP2-208ENST00000392556 NFKBIBQ15653 356 aa14.72□□□□□ -0.05
TRAF3IP2-208ENST00000392556 ZNF831Q5JPB2 1677 aa14.71□□□□□ -0.05
TRAF3IP2-208ENST00000392556 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.7□□□□□ -0.06
TRAF3IP2-208ENST00000392556 ADRA2BP18089 450 aa14.7□□□□□ -0.06
TRAF3IP2-208ENST00000392556 ATP6V1AP38606 617 aa14.7□□□□□ -0.06
TRAF3IP2-208ENST00000392556 TNNT2P45379 298 aaPredicted RBP14.7□□□□□ -0.06
TRAF3IP2-208ENST00000392556 NLGN2Q8NFZ4 835 aa14.7□□□□□ -0.06
TRAF3IP2-208ENST00000392556 MS4A1P11836 297 aa14.7□□□□□ -0.06
TRAF3IP2-208ENST00000392556 FGD1P98174 961 aa14.7□□□□□ -0.06
TRAF3IP2-208ENST00000392556 RC3H1Q5TC82 1133 aaKnown RBP14.7□□□□□ -0.06
TRAF3IP2-208ENST00000392556 ATG3Q9NT62 314 aa14.7□□□□□ -0.06
TRAF3IP2-208ENST00000392556 HSP90AA1P07900 732 aaKnown RBP14.69□□□□□ -0.06
TRAF3IP2-208ENST00000392556 AAMPQ13685 434 aa14.69□□□□□ -0.06
TRAF3IP2-208ENST00000392556 ASAP1Q9ULH1 1129 aa14.69□□□□□ -0.06
TRAF3IP2-208ENST00000392556 KDRP35968 1356 aa14.69□□□□□ -0.06
TRAF3IP2-208ENST00000392556 UBR3Q6ZT12 1888 aa14.69□□□□□ -0.06
TRAF3IP2-208ENST00000392556 C1orf141Q5JVX7 400 aa14.68□□□□□ -0.06
TRAF3IP2-208ENST00000392556 MSL1Q68DK7 614 aa14.68□□□□□ -0.06
TRAF3IP2-208ENST00000392556 LINC00116Q8NCU8 138 aa14.68□□□□□ -0.06
TRAF3IP2-208ENST00000392556 RBM10P98175 930 aaKnown RBP14.68□□□□□ -0.06
TRAF3IP2-208ENST00000392556 ZNF530Q6P9A1 599 aaPredicted RBP14.67□□□□□ -0.06
TRAF3IP2-208ENST00000392556 GNPATO15228 680 aa14.67□□□□□ -0.06
TRAF3IP2-208ENST00000392556 CABP4P57796 275 aa14.67□□□□□ -0.06
TRAF3IP2-208ENST00000392556 ITPK1Q13572 414 aa14.67□□□□□ -0.06
TRAF3IP2-208ENST00000392556 RTCBQ9Y3I0 505 aaKnown RBP14.67□□□□□ -0.06
TRAF3IP2-208ENST00000392556 CNTNAP4Q9C0A0 1308 aa14.67□□□□□ -0.06
TRAF3IP2-208ENST00000392556 NLGN1Q8N2Q7 840 aa14.66□□□□□ -0.06
TRAF3IP2-208ENST00000392556 BACH2Q9BYV9 841 aa14.66□□□□□ -0.06
TRAF3IP2-208ENST00000392556 PHF14O94880 888 aa14.66□□□□□ -0.06
TRAF3IP2-208ENST00000392556 PDE4AP27815 886 aa14.66□□□□□ -0.06
TRAF3IP2-208ENST00000392556 MTHFSP49914 203 aa14.66□□□□□ -0.06
TRAF3IP2-208ENST00000392556 TRAPPC3LQ5T215 181 aa14.66□□□□□ -0.06
TRAF3IP2-208ENST00000392556 YBX3P16989 372 aaKnown RBP eCLIP14.65□□□□□ -0.061e-8■■■□□ 14.9
TRAF3IP2-208ENST00000392556 RRAGDQ9NQL2 400 aaPredicted RBP14.65□□□□□ -0.06
TRAF3IP2-208ENST00000392556 IL13P35225 146 aa14.64□□□□□ -0.07
TRAF3IP2-208ENST00000392556 C1QTNF8P60827 252 aa14.64□□□□□ -0.07
TRAF3IP2-208ENST00000392556 AMER1Q5JTC6 1135 aaPredicted RBP14.64□□□□□ -0.07
TRAF3IP2-208ENST00000392556 NPM2Q86SE8 214 aaKnown RBP14.64□□□□□ -0.07
TRAF3IP2-208ENST00000392556 KDM6AO15550 1401 aaPredicted RBP14.63□□□□□ -0.07
TRAF3IP2-208ENST00000392556 GIGYF1O75420 1035 aaPredicted RBP14.63□□□□□ -0.07
TRAF3IP2-208ENST00000392556 RPS6KA4O75676 772 aa14.63□□□□□ -0.07
TRAF3IP2-208ENST00000392556 SULT6B1Q6IMI4 303 aa14.63□□□□□ -0.07
TRAF3IP2-208ENST00000392556 NPC1L1Q9UHC9 1359 aa14.63□□□□□ -0.07
TRAF3IP2-208ENST00000392556 TGFB2P61812 414 aa14.63□□□□□ -0.07
TRAF3IP2-208ENST00000392556 AKAP4Q5JQC9 854 aa14.63□□□□□ -0.07
TRAF3IP2-208ENST00000392556 RBM42Q9BTD8 480 aaKnown RBP14.63□□□□□ -0.07
TRAF3IP2-208ENST00000392556 KIF7Q2M1P5 1343 aa14.62□□□□□ -0.07
TRAF3IP2-208ENST00000392556 AMIGO3Q86WK7 504 aa14.62□□□□□ -0.07
TRAF3IP2-208ENST00000392556 CICQ96RK0 1608 aaPredicted RBP14.61□□□□□ -0.07
TRAF3IP2-208ENST00000392556 PDE4CQ08493 712 aa14.6□□□□□ -0.07
TRAF3IP2-208ENST00000392556 MMP10P09238 476 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms