RNA–Protein interactions for RNA: ENST00000392520.2

CIT-202, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 5,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-202ENST00000392520 SSBP05455 408 aaKnown RBP eCLIP17.4■□□□□ 0.38
CIT-202ENST00000392520 GBP2P32456 591 aaPredicted RBP17.4■□□□□ 0.38
CIT-202ENST00000392520 PRIMPOLQ96LW4 560 aa17.4■□□□□ 0.38
CIT-202ENST00000392520 UVSSAQ2YD98 709 aa17.39■□□□□ 0.38
CIT-202ENST00000392520 LRPPRCP42704 1394 aaKnown RBP17.39■□□□□ 0.37
CIT-202ENST00000392520 CABP4P57796 275 aa17.39■□□□□ 0.37
CIT-202ENST00000392520 POTEB2H3BUK9 544 aa17.39■□□□□ 0.37
CIT-202ENST00000392520 SEPT11Q9NVA2 429 aaKnown RBP17.39■□□□□ 0.37
CIT-202ENST00000392520 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.38■□□□□ 0.37
CIT-202ENST00000392520 KLHL40Q2TBA0 621 aa17.38■□□□□ 0.37
CIT-202ENST00000392520 C16orf45Q96MC5 204 aaPredicted RBP17.38■□□□□ 0.37
CIT-202ENST00000392520 EFCAB5A4FU69 1503 aa17.38■□□□□ 0.37
CIT-202ENST00000392520 HMGB1P09429 215 aaKnown RBP17.38■□□□□ 0.37
CIT-202ENST00000392520 CAVIN2O95810 425 aa17.38■□□□□ 0.37
CIT-202ENST00000392520 SLC26A8Q96RN1 970 aa17.38■□□□□ 0.37
CIT-202ENST00000392520 SPG7Q9UQ90 795 aa17.38■□□□□ 0.37
CIT-202ENST00000392520 MYL6BP14649 208 aa17.37■□□□□ 0.37
CIT-202ENST00000392520 ATP2B2Q01814 1243 aa17.37■□□□□ 0.37
CIT-202ENST00000392520 RPGRIP1LQ68CZ1 1315 aa17.37■□□□□ 0.37
CIT-202ENST00000392520 ESCO1Q5FWF5 840 aa17.37■□□□□ 0.37
CIT-202ENST00000392520 TXNDC2Q86VQ3 553 aa17.37■□□□□ 0.37
CIT-202ENST00000392520 RTEL1-TNFRSF6BF6WH68 1400 aa17.37■□□□□ 0.37
CIT-202ENST00000392520 NSD3Q9BZ95 1437 aa17.37■□□□□ 0.37
CIT-202ENST00000392520 FKBP15Q5T1M5 1219 aa17.37■□□□□ 0.37
CIT-202ENST00000392520 MICALCLQ6ZW33 695 aa17.37■□□□□ 0.37
CIT-202ENST00000392520 SLC52A1Q9NWF4 448 aa17.37■□□□□ 0.37
CIT-202ENST00000392520 SYNJ2O15056 1496 aa17.36■□□□□ 0.37
CIT-202ENST00000392520 GOLGA6L9A6NEM1 432 aa17.36■□□□□ 0.37
CIT-202ENST00000392520 C8orf76Q96K31 380 aa17.36■□□□□ 0.37
CIT-202ENST00000392520 BAG4O95429 457 aaKnown RBP17.36■□□□□ 0.37
CIT-202ENST00000392520 ADCY5O95622 1261 aa17.36■□□□□ 0.37
CIT-202ENST00000392520 PAFAH1B1P43034 410 aa17.36■□□□□ 0.37
CIT-202ENST00000392520 MAP2K1Q02750 393 aaPredicted RBP17.36■□□□□ 0.37
CIT-202ENST00000392520 DYDC1Q8WWB3 177 aa17.36■□□□□ 0.37
CIT-202ENST00000392520 BMP2KLQ5H9B9 411 aa17.35■□□□□ 0.37
CIT-202ENST00000392520 PPP4R3BQ5MIZ7 849 aa17.35■□□□□ 0.37
CIT-202ENST00000392520 PHAXQ9H814 394 aaKnown RBP17.35■□□□□ 0.37
CIT-202ENST00000392520 BTBD11A6QL63 1104 aa17.35■□□□□ 0.37
CIT-202ENST00000392520 POLR3GO15318 223 aaPredicted RBP17.35■□□□□ 0.37
CIT-202ENST00000392520 SMARCA5O60264 1052 aaPredicted RBP17.35■□□□□ 0.37
CIT-202ENST00000392520 CYB5RLQ6IPT4 315 aa17.35■□□□□ 0.37
CIT-202ENST00000392520 CCDC196A0A1B0GTZ2 297 aa17.35■□□□□ 0.37
CIT-202ENST00000392520 CETN2P41208 172 aa17.35■□□□□ 0.37
CIT-202ENST00000392520 CKAP2LQ8IYA6 745 aa17.35■□□□□ 0.37
CIT-202ENST00000392520 AIDAQ96BJ3 306 aa17.35■□□□□ 0.37
CIT-202ENST00000392520 BMS1Q14692 1282 aaKnown RBP17.35■□□□□ 0.37
CIT-202ENST00000392520 DUSP27Q5VZP5 1158 aa17.35■□□□□ 0.37
CIT-202ENST00000392520 PAF1Q8N7H5 531 aa17.35■□□□□ 0.37
CIT-202ENST00000392520 PPP1R12BO60237 982 aaPredicted RBP17.34■□□□□ 0.37
CIT-202ENST00000392520 LUZP1Q86V48 1076 aa17.34■□□□□ 0.37
CIT-202ENST00000392520 SKAP1Q86WV1 359 aa17.34■□□□□ 0.37
CIT-202ENST00000392520 TRMT1Q9NXH9 659 aaKnown RBP17.34■□□□□ 0.37
CIT-202ENST00000392520 PAXBP1Q9Y5B6 917 aa17.34■□□□□ 0.37
CIT-202ENST00000392520 TBC1D32Q96NH3 1257 aa17.34■□□□□ 0.37
CIT-202ENST00000392520 USO1O60763 962 aaKnown RBP17.34■□□□□ 0.37
CIT-202ENST00000392520 CLCN1P35523 988 aa17.34■□□□□ 0.37
CIT-202ENST00000392520 MAPK8IP2Q13387 824 aaPredicted RBP17.34■□□□□ 0.37
CIT-202ENST00000392520 STX1AQ16623 288 aa17.34■□□□□ 0.37
CIT-202ENST00000392520 KLHL10Q6JEL2 608 aa17.34■□□□□ 0.37
CIT-202ENST00000392520 SMARCC1Q92922 1105 aaPredicted RBP17.34■□□□□ 0.37
CIT-202ENST00000392520 IDH1O75874 414 aaKnown RBP17.33■□□□□ 0.37
CIT-202ENST00000392520 VPS36Q86VN1 386 aa17.33■□□□□ 0.36
CIT-202ENST00000392520 TIAM1Q13009 1591 aa17.33■□□□□ 0.36
CIT-202ENST00000392520 GNAT3A8MTJ3 354 aa17.33■□□□□ 0.36
CIT-202ENST00000392520 YEATS4O95619 227 aa17.33■□□□□ 0.36
CIT-202ENST00000392520 CCDC91Q7Z6B0 441 aa17.33■□□□□ 0.36
CIT-202ENST00000392520 GTF2F1P35269 517 aaKnown RBP eCLIP17.32■□□□□ 0.36
CIT-202ENST00000392520 RRS1Q15050 365 aaKnown RBP17.32■□□□□ 0.36
CIT-202ENST00000392520 DHX37Q8IY37 1157 aaKnown RBP17.32■□□□□ 0.36
CIT-202ENST00000392520 RAI14Q9P0K7 980 aa17.32■□□□□ 0.36
CIT-202ENST00000392520 LRP2BPQ9P2M1 347 aa17.32■□□□□ 0.36
CIT-202ENST00000392520 DAPK1P53355 1430 aa17.32■□□□□ 0.36
CIT-202ENST00000392520 STX6O43752 255 aa17.32■□□□□ 0.36
CIT-202ENST00000392520 ZNF165P49910 485 aa17.32■□□□□ 0.36
CIT-202ENST00000392520 UBE2HP62256 183 aa17.32■□□□□ 0.36
CIT-202ENST00000392520 SNW1Q13573 536 aaKnown RBP17.32■□□□□ 0.36
CIT-202ENST00000392520 CACNA2D4Q7Z3S7 1137 aa17.32■□□□□ 0.36
CIT-202ENST00000392520 OSCARQ8IYS5 282 aa17.32■□□□□ 0.36
CIT-202ENST00000392520 AKAP2Q9Y2D5 859 aa17.32■□□□□ 0.36
CIT-202ENST00000392520 DESP17661 470 aa17.32■□□□□ 0.36
CIT-202ENST00000392520 FAM69CQ0P6D2 419 aa17.32■□□□□ 0.36
CIT-202ENST00000392520 FSIP1Q8NA03 581 aa17.32■□□□□ 0.36
CIT-202ENST00000392520 FGFR1OPO95684 399 aaKnown RBP17.31■□□□□ 0.36
CIT-202ENST00000392520 IFFO1Q0D2I5 559 aa17.31■□□□□ 0.36
CIT-202ENST00000392520 TBC1D9Q6ZT07 1266 aa17.3■□□□□ 0.36
CIT-202ENST00000392520 CNNM3Q8NE01 707 aa17.3■□□□□ 0.36
CIT-202ENST00000392520 TSG101Q99816 390 aa17.3■□□□□ 0.36
CIT-202ENST00000392520 TROQ12816 1431 aaPredicted RBP17.3■□□□□ 0.36
CIT-202ENST00000392520 POTEJP0CG39 1038 aa17.3■□□□□ 0.36
CIT-202ENST00000392520 SMC1AQ14683 1233 aaKnown RBP17.3■□□□□ 0.36
CIT-202ENST00000392520 TMC6Q7Z403 805 aa17.3■□□□□ 0.36
CIT-202ENST00000392520 NUP88Q99567 741 aaPredicted RBP17.3■□□□□ 0.36
CIT-202ENST00000392520 BOLA2Q9H3K6 86 aa17.3■□□□□ 0.36
CIT-202ENST00000392520 NAA15Q9BXJ9 866 aaKnown RBP17.3■□□□□ 0.36
CIT-202ENST00000392520 CCDC150Q8NCX0 1101 aa17.29■□□□□ 0.36
CIT-202ENST00000392520 CCDC113Q9H0I3 377 aa17.29■□□□□ 0.36
CIT-202ENST00000392520 LRSAM1Q6UWE0 723 aa17.29■□□□□ 0.36
CIT-202ENST00000392520 NAIPQ13075 1403 aa17.29■□□□□ 0.36
CIT-202ENST00000392520 CEP135Q66GS9 1140 aa17.29■□□□□ 0.36
CIT-202ENST00000392520 LARP1Q6PKG0 1096 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms