RNA–Protein interactions for RNA: ENST00000390996.1

RNU6-1009P-201, Transcript of RNA, U6 small nuclear 1009, pseudogene, humanhuman

BASIC

Gene RNU6-1009P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1009P-201ENST00000390996 OIP5O43482 229 aa7.8□□□□□ -1.16
RNU6-1009P-201ENST00000390996 PLA2G4EQ3MJ16 856 aa7.8□□□□□ -1.16
RNU6-1009P-201ENST00000390996 PHTF2Q8N3S3 785 aa7.8□□□□□ -1.16
RNU6-1009P-201ENST00000390996 NEDD1Q8NHV4 660 aa7.8□□□□□ -1.16
RNU6-1009P-201ENST00000390996 ESF1Q9H501 851 aaKnown RBP7.8□□□□□ -1.16
RNU6-1009P-201ENST00000390996 A0A1B0GTH6 734 aa7.79□□□□□ -1.16
RNU6-1009P-201ENST00000390996 APBB1O00213 710 aa7.79□□□□□ -1.16
RNU6-1009P-201ENST00000390996 MAP2K3P46734 347 aa7.79□□□□□ -1.16
RNU6-1009P-201ENST00000390996 TSGA10IPQ3SY00 556 aa7.79□□□□□ -1.16
RNU6-1009P-201ENST00000390996 ZSCAN10Q96SZ4 725 aaPredicted RBP7.79□□□□□ -1.16
RNU6-1009P-201ENST00000390996 OXCT2Q9BYC2 517 aaPredicted RBP7.79□□□□□ -1.16
RNU6-1009P-201ENST00000390996 GPAMQ9HCL2 828 aa7.79□□□□□ -1.16
RNU6-1009P-201ENST00000390996 NSFL1CQ9UNZ2 370 aaKnown RBP7.79□□□□□ -1.16
RNU6-1009P-201ENST00000390996 MYCP01106 439 aaPredicted RBP7.78□□□□□ -1.16
RNU6-1009P-201ENST00000390996 PHKA2P46019 1235 aa7.78□□□□□ -1.16
RNU6-1009P-201ENST00000390996 C4orf17Q53FE4 359 aa7.78□□□□□ -1.16
RNU6-1009P-201ENST00000390996 SHISA8B8ZZ34 492 aa7.77□□□□□ -1.17
RNU6-1009P-201ENST00000390996 IRF5Q13568 498 aa7.77□□□□□ -1.17
RNU6-1009P-201ENST00000390996 LBRQ14739 615 aaKnown RBP7.77□□□□□ -1.17
RNU6-1009P-201ENST00000390996 C1orf229Q6ZS94 237 aaPredicted RBP7.77□□□□□ -1.17
RNU6-1009P-201ENST00000390996 PODNQ7Z5L7 613 aa7.77□□□□□ -1.17
RNU6-1009P-201ENST00000390996 KLRG1Q96E93 195 aa7.77□□□□□ -1.17
RNU6-1009P-201ENST00000390996 SPOCK3Q9BQ16 436 aa7.77□□□□□ -1.17
RNU6-1009P-201ENST00000390996 TBC1D2BQ9UPU7 963 aa7.77□□□□□ -1.17
RNU6-1009P-201ENST00000390996 MSTNO14793 375 aa7.76□□□□□ -1.17
RNU6-1009P-201ENST00000390996 PROCP04070 461 aa7.76□□□□□ -1.17
RNU6-1009P-201ENST00000390996 MSX1P28360 303 aa7.76□□□□□ -1.17
RNU6-1009P-201ENST00000390996 SNRPNP63162 240 aaKnown RBP7.76□□□□□ -1.17
RNU6-1009P-201ENST00000390996 GNASQ5JWF2 1037 aa7.76□□□□□ -1.17
RNU6-1009P-201ENST00000390996 NDFIP2Q9NV92 336 aa7.76□□□□□ -1.17
RNU6-1009P-201ENST00000390996 CHIC2Q9UKJ5 165 aa7.76□□□□□ -1.17
RNU6-1009P-201ENST00000390996 STAU1O95793 577 aaKnown RBP7.75□□□□□ -1.17
RNU6-1009P-201ENST00000390996 ESCO1Q5FWF5 840 aa7.75□□□□□ -1.17
RNU6-1009P-201ENST00000390996 ETNK1Q9HBU6 452 aa7.75□□□□□ -1.17
RNU6-1009P-201ENST00000390996 TMEM214Q6NUQ4 689 aaKnown RBP7.74□□□□□ -1.17
RNU6-1009P-201ENST00000390996 PPARGC1BQ86YN6 1023 aaKnown RBP7.74□□□□□ -1.17
RNU6-1009P-201ENST00000390996 RUBCNLQ9H714 662 aa7.74□□□□□ -1.17
RNU6-1009P-201ENST00000390996 DOLKQ9UPQ8 538 aa7.74□□□□□ -1.17
RNU6-1009P-201ENST00000390996 C2CD2LO14523 706 aa7.73□□□□□ -1.17
RNU6-1009P-201ENST00000390996 HOXB4P17483 251 aaPredicted RBP7.73□□□□□ -1.17
RNU6-1009P-201ENST00000390996 USP4Q13107 963 aa7.73□□□□□ -1.17
RNU6-1009P-201ENST00000390996 CRISPLD1Q9H336 500 aa7.73□□□□□ -1.17
RNU6-1009P-201ENST00000390996 PHF24Q9UPV7 400 aa7.73□□□□□ -1.17
RNU6-1009P-201ENST00000390996 SCNN1DP51172 638 aa7.72□□□□□ -1.17
RNU6-1009P-201ENST00000390996 EIF4G2P78344 907 aaKnown RBP eCLIP7.72□□□□□ -1.17
RNU6-1009P-201ENST00000390996 GALNT6Q8NCL4 622 aa7.72□□□□□ -1.17
RNU6-1009P-201ENST00000390996 RHBDD1Q8TEB9 315 aa7.72□□□□□ -1.17
RNU6-1009P-201ENST00000390996 ABHD17AQ96GS6 310 aa7.72□□□□□ -1.17
RNU6-1009P-201ENST00000390996 GDF2Q9UK05 429 aaPredicted RBP7.72□□□□□ -1.17
RNU6-1009P-201ENST00000390996 ATXN7L1Q9ULK2 861 aaPredicted RBP7.72□□□□□ -1.17
RNU6-1009P-201ENST00000390996 BNIP3LO60238 219 aa7.71□□□□□ -1.18
RNU6-1009P-201ENST00000390996 SLC24A1O60721 1099 aa7.71□□□□□ -1.18
RNU6-1009P-201ENST00000390996 ADAM23O75077 832 aa7.71□□□□□ -1.18
RNU6-1009P-201ENST00000390996 CSB-PGBD3P0DP91 1061 aa7.71□□□□□ -1.18
RNU6-1009P-201ENST00000390996 GTF2E1P29083 439 aaPredicted RBP7.71□□□□□ -1.18
RNU6-1009P-201ENST00000390996 TLR1Q15399 786 aa7.71□□□□□ -1.18
RNU6-1009P-201ENST00000390996 RNF135Q8IUD6 432 aa7.71□□□□□ -1.18
RNU6-1009P-201ENST00000390996 PGBD3Q8N328 593 aa7.71□□□□□ -1.18
RNU6-1009P-201ENST00000390996 DNAAF2Q9NVR5 837 aaKnown RBP7.71□□□□□ -1.18
RNU6-1009P-201ENST00000390996 KRBA1A5PL33 1030 aa7.7□□□□□ -1.18
RNU6-1009P-201ENST00000390996 COL8A1P27658 744 aa7.7□□□□□ -1.18
RNU6-1009P-201ENST00000390996 CTBSQ01459 385 aa7.7□□□□□ -1.18
RNU6-1009P-201ENST00000390996 SLFNL1Q499Z3 407 aa7.7□□□□□ -1.18
RNU6-1009P-201ENST00000390996 LINC00114Q6XXX2 140 aa7.7□□□□□ -1.18
RNU6-1009P-201ENST00000390996 ZNF295-AS1Q8N0V1 137 aa7.7□□□□□ -1.18
RNU6-1009P-201ENST00000390996 GOLGA6L1Q8N7Z2 621 aa7.7□□□□□ -1.18
RNU6-1009P-201ENST00000390996 EDARADDQ8WWZ3 215 aa7.7□□□□□ -1.18
RNU6-1009P-201ENST00000390996 BMP4P12644 408 aa7.69□□□□□ -1.18
RNU6-1009P-201ENST00000390996 ATP4AP20648 1035 aa7.69□□□□□ -1.18
RNU6-1009P-201ENST00000390996 FGFR3P22607 806 aa7.69□□□□□ -1.18
RNU6-1009P-201ENST00000390996 OXLD1Q5BKU9 147 aa7.69□□□□□ -1.18
RNU6-1009P-201ENST00000390996 EFHC2Q5JST6 749 aa7.69□□□□□ -1.18
RNU6-1009P-201ENST00000390996 SLCO4C1Q6ZQN7 724 aa7.69□□□□□ -1.18
RNU6-1009P-201ENST00000390996 HCN2Q9UL51 889 aa7.69□□□□□ -1.18
RNU6-1009P-201ENST00000390996 MKL2Q9ULH7 1088 aa7.69□□□□□ -1.18
RNU6-1009P-201ENST00000390996 INHAP05111 366 aa7.68□□□□□ -1.18
RNU6-1009P-201ENST00000390996 GDF10P55107 478 aa7.68□□□□□ -1.18
RNU6-1009P-201ENST00000390996 VAC14Q08AM6 782 aa7.68□□□□□ -1.18
RNU6-1009P-201ENST00000390996 GGA1Q9UJY5 639 aa7.68□□□□□ -1.18
RNU6-1009P-201ENST00000390996 PLA2G4AP47712 749 aa7.67□□□□□ -1.18
RNU6-1009P-201ENST00000390996 TBC1D9Q6ZT07 1266 aa7.67□□□□□ -1.18
RNU6-1009P-201ENST00000390996 ALYREFQ86V81 257 aaKnown RBP7.67□□□□□ -1.18
RNU6-1009P-201ENST00000390996 SIRT1Q96EB6 747 aa7.67□□□□□ -1.18
RNU6-1009P-201ENST00000390996 EPXP11678 715 aa7.66□□□□□ -1.18
RNU6-1009P-201ENST00000390996 ZCCHC2Q9C0B9 1178 aaKnown RBP7.66□□□□□ -1.18
RNU6-1009P-201ENST00000390996 PRM3Q9NNZ6 103 aa7.66□□□□□ -1.18
RNU6-1009P-201ENST00000390996 ARAFP10398 606 aa7.65□□□□□ -1.18
RNU6-1009P-201ENST00000390996 SMTNP53814 917 aa7.65□□□□□ -1.18
RNU6-1009P-201ENST00000390996 MAP7D1Q3KQU3 841 aa7.65□□□□□ -1.18
RNU6-1009P-201ENST00000390996 NLRP8Q86W28 1048 aa7.65□□□□□ -1.18
RNU6-1009P-201ENST00000390996 PLPP7Q8NBV4 271 aa7.65□□□□□ -1.18
RNU6-1009P-201ENST00000390996 C1orf216Q8TAB5 229 aa7.65□□□□□ -1.18
RNU6-1009P-201ENST00000390996 SUV39H2Q9H5I1 410 aa7.65□□□□□ -1.18
RNU6-1009P-201ENST00000390996 RRAGCQ9HB90 399 aa7.65□□□□□ -1.18
RNU6-1009P-201ENST00000390996 GDPD2Q9HCC8 539 aa7.65□□□□□ -1.18
RNU6-1009P-201ENST00000390996 IQSEC3Q9UPP2 1182 aaPredicted RBP7.65□□□□□ -1.18
RNU6-1009P-201ENST00000390996 PCDHGC4Q9Y5F7 938 aa7.65□□□□□ -1.18
RNU6-1009P-201ENST00000390996 TMEM229AB2RXF0 380 aa7.64□□□□□ -1.19
RNU6-1009P-201ENST00000390996 FIGNL1Q6PIW4 674 aa7.64□□□□□ -1.19
RNU6-1009P-201ENST00000390996 BTBD6Q96KE9 485 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms