RNA–Protein interactions for RNA: ENST00000390955.1

RNU6-1176P-201, Transcript of RNA, U6 small nuclear 1176, pseudogene, humanhuman

BASIC

Gene RNU6-1176P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1176P-201ENST00000390955 PALM3A6NDB9 673 aaPredicted RBP11.29□□□□□ -0.6
RNU6-1176P-201ENST00000390955 PHKA2P46019 1235 aa11.29□□□□□ -0.6
RNU6-1176P-201ENST00000390955 SCNN1DP51172 638 aa11.29□□□□□ -0.6
RNU6-1176P-201ENST00000390955 PPP1R12CQ9BZL4 782 aa11.29□□□□□ -0.6
RNU6-1176P-201ENST00000390955 MKRN1Q9UHC7 482 aaKnown RBP11.29□□□□□ -0.6
RNU6-1176P-201ENST00000390955 PCDHGA11Q9Y5H2 935 aa11.29□□□□□ -0.6
RNU6-1176P-201ENST00000390955 ITGA6P23229 1130 aa11.28□□□□□ -0.6
RNU6-1176P-201ENST00000390955 TPCN2Q8NHX9 752 aa11.28□□□□□ -0.6
RNU6-1176P-201ENST00000390955 MAFBQ9Y5Q3 323 aaPredicted RBP11.28□□□□□ -0.6
RNU6-1176P-201ENST00000390955 BACH1O14867 736 aa11.27□□□□□ -0.61
RNU6-1176P-201ENST00000390955 LMOD1P29536 600 aaPredicted RBP11.27□□□□□ -0.61
RNU6-1176P-201ENST00000390955 ZNF594Q96JF6 807 aaPredicted RBP11.27□□□□□ -0.61
RNU6-1176P-201ENST00000390955 DNAAF2Q9NVR5 837 aaKnown RBP11.27□□□□□ -0.61
RNU6-1176P-201ENST00000390955 ERBB4Q15303 1308 aa11.27□□□□□ -0.61
RNU6-1176P-201ENST00000390955 SENP3-EIF4A1A0A087X0R7 540 aa11.26□□□□□ -0.61
RNU6-1176P-201ENST00000390955 SPATA31C2B4DYI2 1134 aa11.26□□□□□ -0.61
RNU6-1176P-201ENST00000390955 OGFOD1Q8N543 542 aa11.26□□□□□ -0.61
RNU6-1176P-201ENST00000390955 WIPF1O43516 503 aa11.25□□□□□ -0.61
RNU6-1176P-201ENST00000390955 RASA1P20936 1047 aa11.25□□□□□ -0.61
RNU6-1176P-201ENST00000390955 GMPRP36959 345 aa11.25□□□□□ -0.61
RNU6-1176P-201ENST00000390955 SMTNP53814 917 aa11.25□□□□□ -0.61
RNU6-1176P-201ENST00000390955 VWA5B2Q8N398 1253 aa11.25□□□□□ -0.61
RNU6-1176P-201ENST00000390955 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.25□□□□□ -0.61
RNU6-1176P-201ENST00000390955 FHDC1Q9C0D6 1143 aaPredicted RBP11.25□□□□□ -0.61
RNU6-1176P-201ENST00000390955 TMEM229AB2RXF0 380 aa11.24□□□□□ -0.61
RNU6-1176P-201ENST00000390955 CCDC102BQ68D86 513 aa11.24□□□□□ -0.61
RNU6-1176P-201ENST00000390955 LARP1Q6PKG0 1096 aaKnown RBP11.24□□□□□ -0.61
RNU6-1176P-201ENST00000390955 SV2AQ7L0J3 742 aa11.24□□□□□ -0.61
RNU6-1176P-201ENST00000390955 RHBDD1Q8TEB9 315 aa11.24□□□□□ -0.61
RNU6-1176P-201ENST00000390955 GPAMQ9HCL2 828 aa11.24□□□□□ -0.61
RNU6-1176P-201ENST00000390955 DYRK1BQ9Y463 629 aa11.24□□□□□ -0.61
RNU6-1176P-201ENST00000390955 PLA2G4AP47712 749 aa11.23□□□□□ -0.61
RNU6-1176P-201ENST00000390955 ZNF358Q9NW07 568 aa11.23□□□□□ -0.61
RNU6-1176P-201ENST00000390955 HRH3Q9Y5N1 445 aa11.23□□□□□ -0.61
RNU6-1176P-201ENST00000390955 A6NJY4 79 aa11.22□□□□□ -0.61
RNU6-1176P-201ENST00000390955 CLDN10P78369 228 aa11.22□□□□□ -0.61
RNU6-1176P-201ENST00000390955 C4orf17Q53FE4 359 aa11.22□□□□□ -0.61
RNU6-1176P-201ENST00000390955 WDR44Q5JSH3 913 aa11.22□□□□□ -0.61
RNU6-1176P-201ENST00000390955 PPARGC1BQ86YN6 1023 aaKnown RBP11.22□□□□□ -0.61
RNU6-1176P-201ENST00000390955 AIDAQ96BJ3 306 aa11.22□□□□□ -0.61
RNU6-1176P-201ENST00000390955 NIFKQ9BYG3 293 aaKnown RBP11.22□□□□□ -0.61
RNU6-1176P-201ENST00000390955 RFX1P22670 979 aa11.21□□□□□ -0.61
RNU6-1176P-201ENST00000390955 LCE2CQ5TA81 110 aa11.21□□□□□ -0.61
RNU6-1176P-201ENST00000390955 FOXR1Q6PIV2 292 aa11.21□□□□□ -0.61
RNU6-1176P-201ENST00000390955 LARGE2Q8N3Y3 721 aa11.21□□□□□ -0.61
RNU6-1176P-201ENST00000390955 CCDC97Q96F63 343 aaPredicted RBP11.21□□□□□ -0.61
RNU6-1176P-201ENST00000390955 CABP1Q9NZU7 370 aa11.21□□□□□ -0.61
RNU6-1176P-201ENST00000390955 KIAA1024Q9UPX6 916 aa11.21□□□□□ -0.61
RNU6-1176P-201ENST00000390955 A0A1B0GTH6 734 aa11.2□□□□□ -0.62
RNU6-1176P-201ENST00000390955 H7C1W4 665 aa11.2□□□□□ -0.62
RNU6-1176P-201ENST00000390955 CSB-PGBD3P0DP91 1061 aa11.2□□□□□ -0.62
RNU6-1176P-201ENST00000390955 PGBD3Q8N328 593 aa11.2□□□□□ -0.62
RNU6-1176P-201ENST00000390955 VRTNQ9H8Y1 702 aa11.2□□□□□ -0.62
RNU6-1176P-201ENST00000390955 F11P03951 625 aa11.19□□□□□ -0.62
RNU6-1176P-201ENST00000390955 VSIG8P0DPA2 414 aa11.19□□□□□ -0.62
RNU6-1176P-201ENST00000390955 SLC4A9Q96Q91 983 aa11.19□□□□□ -0.62
RNU6-1176P-201ENST00000390955 ARID3CA6NKF2 412 aa11.18□□□□□ -0.62
RNU6-1176P-201ENST00000390955 INSM1Q01101 510 aaPredicted RBP11.18□□□□□ -0.62
RNU6-1176P-201ENST00000390955 TRIM22Q8IYM9 498 aa11.18□□□□□ -0.62
RNU6-1176P-201ENST00000390955 TNS4Q8IZW8 715 aa11.18□□□□□ -0.62
RNU6-1176P-201ENST00000390955 CUEDC1Q9NWM3 386 aaPredicted RBP11.18□□□□□ -0.62
RNU6-1176P-201ENST00000390955 CDK2AP1O14519 115 aa11.17□□□□□ -0.62
RNU6-1176P-201ENST00000390955 NBPF1Q3BBV0 1214 aa11.17□□□□□ -0.62
RNU6-1176P-201ENST00000390955 CDCA8Q53HL2 280 aa11.17□□□□□ -0.62
RNU6-1176P-201ENST00000390955 SFI1A8K8P3 1242 aa11.16□□□□□ -0.62
RNU6-1176P-201ENST00000390955 ZBTB7BO15156 539 aaPredicted RBP11.16□□□□□ -0.62
RNU6-1176P-201ENST00000390955 NANOS1Q8WY41 292 aaKnown RBP11.16□□□□□ -0.62
RNU6-1176P-201ENST00000390955 TRERF1Q96PN7 1200 aa11.16□□□□□ -0.62
RNU6-1176P-201ENST00000390955 NUCKS1Q9H1E3 243 aaKnown RBP11.16□□□□□ -0.62
RNU6-1176P-201ENST00000390955 ZNF232Q9UNY5 417 aa11.16□□□□□ -0.62
RNU6-1176P-201ENST00000390955 MSX1P28360 303 aa11.15□□□□□ -0.62
RNU6-1176P-201ENST00000390955 TBCELQ5QJ74 424 aa11.15□□□□□ -0.62
RNU6-1176P-201ENST00000390955 CFAP70Q5T0N1 1121 aa11.15□□□□□ -0.62
RNU6-1176P-201ENST00000390955 ZNF837Q96EG3 531 aaPredicted RBP11.15□□□□□ -0.62
RNU6-1176P-201ENST00000390955 GMCL1Q96IK5 515 aa11.15□□□□□ -0.62
RNU6-1176P-201ENST00000390955 COL25A1Q9BXS0 654 aaPredicted RBP11.15□□□□□ -0.62
RNU6-1176P-201ENST00000390955 RUBCNLQ9H714 662 aa11.15□□□□□ -0.62
RNU6-1176P-201ENST00000390955 CHMP3Q9Y3E7 222 aa11.15□□□□□ -0.62
RNU6-1176P-201ENST00000390955 TATP17735 454 aaPredicted RBP11.14□□□□□ -0.63
RNU6-1176P-201ENST00000390955 SEC13P55735 322 aa11.14□□□□□ -0.63
RNU6-1176P-201ENST00000390955 MTFR1Q15390 333 aa11.14□□□□□ -0.63
RNU6-1176P-201ENST00000390955 CRTC2Q53ET0 693 aaPredicted RBP11.14□□□□□ -0.63
RNU6-1176P-201ENST00000390955 EFHC2Q5JST6 749 aa11.14□□□□□ -0.63
RNU6-1176P-201ENST00000390955 SLC9A9Q8IVB4 645 aa11.14□□□□□ -0.63
RNU6-1176P-201ENST00000390955 SIX5Q8N196 739 aa11.14□□□□□ -0.63
RNU6-1176P-201ENST00000390955 GPR161Q8N6U8 529 aaKnown RBP11.14□□□□□ -0.63
RNU6-1176P-201ENST00000390955 TSEN2Q8NCE0 465 aaKnown RBP11.14□□□□□ -0.63
RNU6-1176P-201ENST00000390955 GTPBP3Q969Y2 492 aaKnown RBP11.14□□□□□ -0.63
RNU6-1176P-201ENST00000390955 CNTNAP3BQ96NU0 1288 aa11.14□□□□□ -0.63
RNU6-1176P-201ENST00000390955 HINFPQ9BQA5 517 aa11.14□□□□□ -0.63
RNU6-1176P-201ENST00000390955 CNTNAP3Q9BZ76 1288 aa11.14□□□□□ -0.63
RNU6-1176P-201ENST00000390955 SCHIP1Q9P0W5 487 aaPredicted RBP11.14□□□□□ -0.63
RNU6-1176P-201ENST00000390955 PARP3Q9Y6F1 533 aa11.14□□□□□ -0.63
RNU6-1176P-201ENST00000390955 USP17L15C9J2P7 530 aa11.13□□□□□ -0.63
RNU6-1176P-201ENST00000390955 USP17L10C9JJH3 530 aa11.13□□□□□ -0.63
RNU6-1176P-201ENST00000390955 USP17L13C9JLJ4 530 aa11.13□□□□□ -0.63
RNU6-1176P-201ENST00000390955 USP17L12C9JPN9 530 aa11.13□□□□□ -0.63
RNU6-1176P-201ENST00000390955 USP17L11C9JVI0 530 aa11.13□□□□□ -0.63
RNU6-1176P-201ENST00000390955 USP17L21D6R901 530 aa11.13□□□□□ -0.63
RNU6-1176P-201ENST00000390955 USP17L18D6R9N7 530 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms