RNA–Protein interactions for RNA: ENST00000390428.3

TRAV6-201, Transcript of T cell receptor alpha variable 6, humanhuman

APPRIS P1 BASIC

Gene TRAV6, Length 404 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6-201ENST00000390428 ZBTB7CA1YPR0 619 aa11.05□□□□□ -0.64
TRAV6-201ENST00000390428 C11orf95C9JLR9 678 aaPredicted RBP11.05□□□□□ -0.64
TRAV6-201ENST00000390428 TBC1D12O60347 775 aa11.05□□□□□ -0.64
TRAV6-201ENST00000390428 RGPD3A6NKT7 1758 aaPredicted RBP11.04□□□□□ -0.64
TRAV6-201ENST00000390428 RGPD4Q7Z3J3 1758 aa11.04□□□□□ -0.64
TRAV6-201ENST00000390428 OVOS2A0A0G2JMS6 1433 aa11.03□□□□□ -0.64
TRAV6-201ENST00000390428 OVOS2A0A0J9YW53 1432 aa11.03□□□□□ -0.64
TRAV6-201ENST00000390428 OVOS2Q6IE36 1432 aa11.03□□□□□ -0.64
TRAV6-201ENST00000390428 NBPF14Q5TI25 921 aa11.03□□□□□ -0.64
TRAV6-201ENST00000390428 SIN3AQ96ST3 1273 aa11.03□□□□□ -0.64
TRAV6-201ENST00000390428 CPSF1Q10570 1443 aaKnown RBP11.02□□□□□ -0.64
TRAV6-201ENST00000390428 DDB1Q16531 1140 aa11.02□□□□□ -0.65
TRAV6-201ENST00000390428 TOM1L2Q6ZVM7 507 aa11.02□□□□□ -0.65
TRAV6-201ENST00000390428 AXIN2Q9Y2T1 843 aa11.02□□□□□ -0.65
TRAV6-201ENST00000390428 TTC21BQ7Z4L5 1316 aa11.02□□□□□ -0.65
TRAV6-201ENST00000390428 ROCK2O75116 1388 aaKnown RBP11.02□□□□□ -0.65
TRAV6-201ENST00000390428 MON2Q7Z3U7 1717 aa11.01□□□□□ -0.65
TRAV6-201ENST00000390428 ARHGEF25Q86VW2 580 aa11.01□□□□□ -0.65
TRAV6-201ENST00000390428 KCNH5Q8NCM2 988 aa11.01□□□□□ -0.65
TRAV6-201ENST00000390428 WDR17Q8IZU2 1322 aa11.01□□□□□ -0.65
TRAV6-201ENST00000390428 TTC21AQ8NDW8 1320 aa11.01□□□□□ -0.65
TRAV6-201ENST00000390428 KAT6BQ8WYB5 2073 aa11□□□□□ -0.65
TRAV6-201ENST00000390428 PLSCR1O15162 318 aa11□□□□□ -0.65
TRAV6-201ENST00000390428 SPNS2Q8IVW8 549 aa11□□□□□ -0.65
TRAV6-201ENST00000390428 CDCA7Q9BWT1 371 aaPredicted RBP11□□□□□ -0.65
TRAV6-201ENST00000390428 NEUROD1Q13562 356 aa10.99□□□□□ -0.65
TRAV6-201ENST00000390428 CARD10Q9BWT7 1032 aa10.99□□□□□ -0.65
TRAV6-201ENST00000390428 EMILIN3Q9NT22 766 aa10.99□□□□□ -0.65
TRAV6-201ENST00000390428 BCL9O00512 1426 aa10.99□□□□□ -0.65
TRAV6-201ENST00000390428 NFAT5O94916 1531 aa10.99□□□□□ -0.65
TRAV6-201ENST00000390428 PTF1AQ7RTS3 328 aa10.98□□□□□ -0.65
TRAV6-201ENST00000390428 MARCH10Q8NA82 808 aaPredicted RBP10.98□□□□□ -0.65
TRAV6-201ENST00000390428 KTN1Q86UP2 1357 aaKnown RBP10.98□□□□□ -0.65
TRAV6-201ENST00000390428 USP54Q70EL1 1684 aa10.98□□□□□ -0.65
TRAV6-201ENST00000390428 LTN1O94822 1766 aa10.98□□□□□ -0.65
TRAV6-201ENST00000390428 KCNQ2O43526 872 aa10.97□□□□□ -0.65
TRAV6-201ENST00000390428 CSB-PGBD3P0DP91 1061 aa10.97□□□□□ -0.65
TRAV6-201ENST00000390428 SPON1Q9HCB6 807 aa10.97□□□□□ -0.65
TRAV6-201ENST00000390428 SBNO2Q9Y2G9 1366 aa10.97□□□□□ -0.65
TRAV6-201ENST00000390428 ABCC6O95255 1503 aa10.97□□□□□ -0.65
TRAV6-201ENST00000390428 CASZ1Q86V15 1759 aa10.97□□□□□ -0.65
TRAV6-201ENST00000390428 POTEEQ6S8J3 1075 aa10.96□□□□□ -0.65
TRAV6-201ENST00000390428 USP31Q70CQ4 1352 aa10.95□□□□□ -0.66
TRAV6-201ENST00000390428 CCDC7Q96M83 1385 aa10.95□□□□□ -0.66
TRAV6-201ENST00000390428 EXOC5O00471 708 aa10.95□□□□□ -0.66
TRAV6-201ENST00000390428 CAMK2BQ13554 666 aa10.95□□□□□ -0.66
TRAV6-201ENST00000390428 ANO8Q9HCE9 1232 aaPredicted RBP10.95□□□□□ -0.66
TRAV6-201ENST00000390428 PPP1R1BQ9UD71 204 aaPredicted RBP10.95□□□□□ -0.66
TRAV6-201ENST00000390428 CD163L1Q9NR16 1453 aa10.94□□□□□ -0.66
TRAV6-201ENST00000390428 TNS2Q63HR2 1409 aa10.94□□□□□ -0.66
TRAV6-201ENST00000390428 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.94□□□□□ -0.66
TRAV6-201ENST00000390428 NINLQ9Y2I6 1382 aa10.93□□□□□ -0.66
TRAV6-201ENST00000390428 NHSQ6T4R5 1651 aa10.93□□□□□ -0.66
TRAV6-201ENST00000390428 MAP3K9P80192 1104 aa10.93□□□□□ -0.66
TRAV6-201ENST00000390428 NME9Q86XW9 330 aa10.93□□□□□ -0.66
TRAV6-201ENST00000390428 CARD11Q9BXL7 1154 aa10.93□□□□□ -0.66
TRAV6-201ENST00000390428 EVI5O60447 810 aa10.92□□□□□ -0.66
TRAV6-201ENST00000390428 MMRN1Q13201 1228 aa10.92□□□□□ -0.66
TRAV6-201ENST00000390428 TXNRD1Q16881 649 aa10.92□□□□□ -0.66
TRAV6-201ENST00000390428 TMC1Q8TDI8 760 aa10.92□□□□□ -0.66
TRAV6-201ENST00000390428 PDGFDQ9GZP0 370 aaPredicted RBP10.92□□□□□ -0.66
TRAV6-201ENST00000390428 BTAF1O14981 1849 aa10.91□□□□□ -0.66
TRAV6-201ENST00000390428 YY1P25490 414 aa10.91□□□□□ -0.66
TRAV6-201ENST00000390428 HDGFL2Q7Z4V5 671 aaPredicted RBP10.91□□□□□ -0.66
TRAV6-201ENST00000390428 SLC12A5Q9H2X9 1139 aa10.91□□□□□ -0.66
TRAV6-201ENST00000390428 EDC4Q6P2E9 1401 aaKnown RBP10.91□□□□□ -0.66
TRAV6-201ENST00000390428 MYOM1P52179 1685 aa10.9□□□□□ -0.66
TRAV6-201ENST00000390428 IL2RBP14784 551 aa10.9□□□□□ -0.66
TRAV6-201ENST00000390428 PBX2P40425 430 aa10.9□□□□□ -0.66
TRAV6-201ENST00000390428 NLRP2Q9NX02 1062 aa10.9□□□□□ -0.66
TRAV6-201ENST00000390428 STK32BQ9NY57 414 aa10.9□□□□□ -0.66
TRAV6-201ENST00000390428 ZBTB7AO95365 584 aa10.89□□□□□ -0.67
TRAV6-201ENST00000390428 PTGER2P43116 358 aa10.89□□□□□ -0.67
TRAV6-201ENST00000390428 SLC15A2Q16348 729 aa10.89□□□□□ -0.67
TRAV6-201ENST00000390428 PPP4R3BQ5MIZ7 849 aa10.89□□□□□ -0.67
TRAV6-201ENST00000390428 ANKRD24Q8TF21 1146 aa10.89□□□□□ -0.67
TRAV6-201ENST00000390428 ACSBG1Q96GR2 724 aa10.89□□□□□ -0.67
TRAV6-201ENST00000390428 PUS7Q96PZ0 661 aaKnown RBP10.89□□□□□ -0.67
TRAV6-201ENST00000390428 TERF2IPQ9NYB0 399 aa10.89□□□□□ -0.67
TRAV6-201ENST00000390428 A0A1W2PP64 1363 aa10.89□□□□□ -0.67
TRAV6-201ENST00000390428 FAM208AQ9UK61 1670 aaKnown RBP10.89□□□□□ -0.67
TRAV6-201ENST00000390428 TONSLQ96HA7 1378 aa10.88□□□□□ -0.67
TRAV6-201ENST00000390428 PAPPAQ13219 1627 aa10.87□□□□□ -0.67
TRAV6-201ENST00000390428 LSM11P83369 360 aaKnown RBP eCLIP10.87□□□□□ -0.67
TRAV6-201ENST00000390428 TSHZ2Q9NRE2 1034 aa10.87□□□□□ -0.67
TRAV6-201ENST00000390428 CHD4Q14839 1912 aa10.87□□□□□ -0.67
TRAV6-201ENST00000390428 RGPD2P0DJD1 1756 aa10.87□□□□□ -0.67
TRAV6-201ENST00000390428 ARHGAP33O14559 1287 aa10.86□□□□□ -0.67
TRAV6-201ENST00000390428 FOSBP53539 338 aa10.86□□□□□ -0.67
TRAV6-201ENST00000390428 ZNF454Q8N9F8 522 aa10.86□□□□□ -0.67
TRAV6-201ENST00000390428 IP6K1Q92551 441 aa10.86□□□□□ -0.67
TRAV6-201ENST00000390428 MTFR1LQ9H019 292 aa10.86□□□□□ -0.67
TRAV6-201ENST00000390428 QSER1Q2KHR3 1735 aa10.85□□□□□ -0.67
TRAV6-201ENST00000390428 DPYSL4O14531 572 aa10.85□□□□□ -0.67
TRAV6-201ENST00000390428 ANKRD13DQ6ZTN6 518 aa10.85□□□□□ -0.67
TRAV6-201ENST00000390428 TESK2Q96S53 571 aa10.85□□□□□ -0.67
TRAV6-201ENST00000390428 ST20-MTHFSA0A0A6YYL1 179 aa10.84□□□□□ -0.67
TRAV6-201ENST00000390428 FHDC1Q9C0D6 1143 aaPredicted RBP10.84□□□□□ -0.67
TRAV6-201ENST00000390428 SHANK3Q9BYB0 1731 aa10.84□□□□□ -0.67
TRAV6-201ENST00000390428 SLC24A1O60721 1099 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms