RNA–Protein interactions for RNA: ENST00000390399.3

TRBV27-201, Transcript of T cell receptor beta variable 27, humanhuman

APPRIS P1 BASIC

Gene TRBV27, Length 387 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27-201ENST00000390399 ZNF831Q5JPB2 1677 aa12□□□□□ -0.49
TRBV27-201ENST00000390399 ADAMTS7Q9UKP4 1686 aa12□□□□□ -0.49
TRBV27-201ENST00000390399 MSH5O43196 834 aa11.99□□□□□ -0.49
TRBV27-201ENST00000390399 ATP6V1AP38606 617 aa11.99□□□□□ -0.49
TRBV27-201ENST00000390399 DDX10Q13206 875 aaKnown RBP11.99□□□□□ -0.49
TRBV27-201ENST00000390399 SLC16A10Q8TF71 515 aa11.99□□□□□ -0.49
TRBV27-201ENST00000390399 VIRMAQ69YN4 1812 aaKnown RBP11.99□□□□□ -0.49
TRBV27-201ENST00000390399 MAP3K5Q99683 1374 aa11.98□□□□□ -0.49
TRBV27-201ENST00000390399 RNMTO43148 476 aaKnown RBP11.98□□□□□ -0.49
TRBV27-201ENST00000390399 U2AF1L5P0DN76 240 aaPredicted RBP11.98□□□□□ -0.49
TRBV27-201ENST00000390399 PRKAR2BP31323 418 aa11.98□□□□□ -0.49
TRBV27-201ENST00000390399 U2AF1Q01081 240 aaKnown RBP eCLIP11.98□□□□□ -0.49
TRBV27-201ENST00000390399 ITPK1Q13572 414 aa11.98□□□□□ -0.49
TRBV27-201ENST00000390399 NFATC2IPQ8NCF5 419 aa11.98□□□□□ -0.49
TRBV27-201ENST00000390399 LINC00116Q8NCU8 138 aa11.98□□□□□ -0.49
TRBV27-201ENST00000390399 GAS2L2Q8NHY3 880 aa11.98□□□□□ -0.49
TRBV27-201ENST00000390399 SGIP1Q9BQI5 828 aa11.98□□□□□ -0.49
TRBV27-201ENST00000390399 RBM42Q9BTD8 480 aaKnown RBP11.98□□□□□ -0.49
TRBV27-201ENST00000390399 RSPH6AQ9H0K4 717 aa11.98□□□□□ -0.49
TRBV27-201ENST00000390399 COL24A1Q17RW2 1714 aa11.97□□□□□ -0.49
TRBV27-201ENST00000390399 COL23A1Q86Y22 540 aaPredicted RBP11.97□□□□□ -0.49
TRBV27-201ENST00000390399 FLAD1Q8NFF5 587 aa11.97□□□□□ -0.49
TRBV27-201ENST00000390399 SLC52A2Q9HAB3 445 aa11.97□□□□□ -0.49
TRBV27-201ENST00000390399 LGR6Q9HBX8 967 aa11.97□□□□□ -0.49
TRBV27-201ENST00000390399 UBR3Q6ZT12 1888 aa11.97□□□□□ -0.49
TRBV27-201ENST00000390399 COL5A3P25940 1745 aaPredicted RBP11.97□□□□□ -0.49
TRBV27-201ENST00000390399 PHF14O94880 888 aa11.96□□□□□ -0.49
TRBV27-201ENST00000390399 CICQ96RK0 1608 aaPredicted RBP11.96□□□□□ -0.5
TRBV27-201ENST00000390399 TJP1Q07157 1748 aa11.95□□□□□ -0.5
TRBV27-201ENST00000390399 GNAT3A8MTJ3 354 aa11.95□□□□□ -0.5
TRBV27-201ENST00000390399 PTCD1O75127 700 aaKnown RBP11.95□□□□□ -0.5
TRBV27-201ENST00000390399 POLD1P28340 1107 aa11.95□□□□□ -0.5
TRBV27-201ENST00000390399 RALBP1Q15311 655 aa11.95□□□□□ -0.5
TRBV27-201ENST00000390399 PHACTR3Q96KR7 559 aa11.95□□□□□ -0.5
TRBV27-201ENST00000390399 SLC4A9Q96Q91 983 aa11.95□□□□□ -0.5
TRBV27-201ENST00000390399 ARXQ96QS3 562 aa11.95□□□□□ -0.5
TRBV27-201ENST00000390399 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.94□□□□□ -0.5
TRBV27-201ENST00000390399 GNPATO15228 680 aa11.94□□□□□ -0.5
TRBV27-201ENST00000390399 FCHSD2O94868 740 aa11.94□□□□□ -0.5
TRBV27-201ENST00000390399 SSFA2P28290 1259 aa11.94□□□□□ -0.5
TRBV27-201ENST00000390399 MSL1Q68DK7 614 aa11.94□□□□□ -0.5
TRBV27-201ENST00000390399 AMIGO3Q86WK7 504 aa11.94□□□□□ -0.5
TRBV27-201ENST00000390399 FHDC1Q9C0D6 1143 aaPredicted RBP11.94□□□□□ -0.5
TRBV27-201ENST00000390399 CNTNAP4Q9C0A0 1308 aa11.93□□□□□ -0.5
TRBV27-201ENST00000390399 KCPQ6ZWJ8 1503 aa11.93□□□□□ -0.5
TRBV27-201ENST00000390399 SMIM5Q71RC9 77 aa11.93□□□□□ -0.5
TRBV27-201ENST00000390399 SIPA1L3O60292 1781 aaPredicted RBP11.92□□□□□ -0.5
TRBV27-201ENST00000390399 MYBBP1AQ9BQG0 1328 aaKnown RBP11.92□□□□□ -0.5
TRBV27-201ENST00000390399 TEFQ10587 303 aa11.92□□□□□ -0.5
TRBV27-201ENST00000390399 SLC39A6Q13433 755 aa11.92□□□□□ -0.5
TRBV27-201ENST00000390399 UBR2Q8IWV8 1755 aa11.92□□□□□ -0.5
TRBV27-201ENST00000390399 NEFMP07197 916 aa11.91□□□□□ -0.5
TRBV27-201ENST00000390399 RC3H1Q5TC82 1133 aaKnown RBP11.91□□□□□ -0.5
TRBV27-201ENST00000390399 KLHL34Q8N239 644 aa11.91□□□□□ -0.5
TRBV27-201ENST00000390399 IL17REQ8NFR9 667 aa11.91□□□□□ -0.5
TRBV27-201ENST00000390399 SYT17Q9BSW7 474 aa11.91□□□□□ -0.5
TRBV27-201ENST00000390399 RTCBQ9Y3I0 505 aaKnown RBP11.91□□□□□ -0.5
TRBV27-201ENST00000390399 CEMIPQ8WUJ3 1361 aa11.91□□□□□ -0.5
TRBV27-201ENST00000390399 DCAF8L1A6NGE4 600 aa11.9□□□□□ -0.5
TRBV27-201ENST00000390399 CRKLP46109 303 aaKnown RBP11.9□□□□□ -0.5
TRBV27-201ENST00000390399 TTC5Q8N0Z6 440 aa11.9□□□□□ -0.5
TRBV27-201ENST00000390399 RTF1Q92541 710 aaKnown RBP11.9□□□□□ -0.5
TRBV27-201ENST00000390399 C4AP0C0L4 1744 aa11.89□□□□□ -0.51
TRBV27-201ENST00000390399 RPS6KA4O75676 772 aa11.89□□□□□ -0.51
TRBV27-201ENST00000390399 ADRA2BP18089 450 aa11.89□□□□□ -0.51
TRBV27-201ENST00000390399 TRAPPC3LQ5T215 181 aa11.89□□□□□ -0.51
TRBV27-201ENST00000390399 DNAJC10Q8IXB1 793 aa11.89□□□□□ -0.51
TRBV27-201ENST00000390399 MYH14Q7Z406 1995 aaKnown RBP11.88□□□□□ -0.51
TRBV27-201ENST00000390399 MCM10Q7L590 875 aa11.88□□□□□ -0.51
TRBV27-201ENST00000390399 VSIG10Q8N0Z9 540 aa11.88□□□□□ -0.51
TRBV27-201ENST00000390399 PNNQ9H307 717 aaKnown RBP11.88□□□□□ -0.51
TRBV27-201ENST00000390399 MAPK8IP3Q9UPT6 1336 aa11.87□□□□□ -0.51
TRBV27-201ENST00000390399 HTATSF1O43719 755 aaKnown RBP11.87□□□□□ -0.51
TRBV27-201ENST00000390399 RFC4P35249 363 aa11.87□□□□□ -0.51
TRBV27-201ENST00000390399 ZNF790Q6PG37 636 aa11.87□□□□□ -0.51
TRBV27-201ENST00000390399 ARHGEF1Q92888 912 aaKnown RBP11.87□□□□□ -0.51
TRBV27-201ENST00000390399 PLEKHF1Q96S99 279 aa11.87□□□□□ -0.51
TRBV27-201ENST00000390399 CCDC87Q9NVE4 849 aa11.87□□□□□ -0.51
TRBV27-201ENST00000390399 DLG5Q8TDM6 1919 aa11.86□□□□□ -0.51
TRBV27-201ENST00000390399 BTBD11A6QL63 1104 aa11.86□□□□□ -0.51
TRBV27-201ENST00000390399 CYP19A1P11511 503 aaPredicted RBP11.86□□□□□ -0.51
TRBV27-201ENST00000390399 DCTN1Q14203 1278 aa11.86□□□□□ -0.51
TRBV27-201ENST00000390399 INTS5Q6P9B9 1019 aaKnown RBP11.86□□□□□ -0.51
TRBV27-201ENST00000390399 ZNF496Q96IT1 587 aaPredicted RBP11.86□□□□□ -0.51
TRBV27-201ENST00000390399 PRKRIP1Q9H875 184 aaPredicted RBP11.86□□□□□ -0.51
TRBV27-201ENST00000390399 HEG1Q9ULI3 1381 aa11.86□□□□□ -0.51
TRBV27-201ENST00000390399 NFE2L2Q16236 605 aa11.85□□□□□ -0.51
TRBV27-201ENST00000390399 NLGN2Q8NFZ4 835 aa11.85□□□□□ -0.51
TRBV27-201ENST00000390399 FMNL2Q96PY5 1086 aa11.85□□□□□ -0.51
TRBV27-201ENST00000390399 SOS1Q07889 1333 aaPredicted RBP11.85□□□□□ -0.51
TRBV27-201ENST00000390399 ZNF316A6NFI3 1004 aaPredicted RBP11.84□□□□□ -0.51
TRBV27-201ENST00000390399 MMP10P09238 476 aa11.84□□□□□ -0.51
TRBV27-201ENST00000390399 GYS1P13807 737 aa11.84□□□□□ -0.51
TRBV27-201ENST00000390399 WDR43Q15061 677 aaKnown RBP eCLIP11.84□□□□□ -0.51
TRBV27-201ENST00000390399 NLGN1Q8N2Q7 840 aa11.84□□□□□ -0.51
TRBV27-201ENST00000390399 ZBTB1Q9Y2K1 713 aa11.84□□□□□ -0.51
TRBV27-201ENST00000390399 USP42Q9H9J4 1324 aaKnown RBP11.84□□□□□ -0.51
TRBV27-201ENST00000390399 COL15A1P39059 1388 aa11.83□□□□□ -0.52
TRBV27-201ENST00000390399 KCNQ3O43525 872 aa11.83□□□□□ -0.52
TRBV27-201ENST00000390399 STARD3NLO95772 234 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms