RNA–Protein interactions for RNA: ENST00000388835.3

KRT18-201, Transcript of keratin 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT18, Length 1,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-201ENST00000388835 GPR162Q16538 588 aa34.79■■■■□ 3.16
KRT18-201ENST00000388835 CC2D1BQ5T0F9 858 aaKnown RBP34.79■■■■□ 3.16
KRT18-201ENST00000388835 NLGN2Q8NFZ4 835 aa34.79■■■■□ 3.16
KRT18-201ENST00000388835 ERVV-2B6SEH9 535 aa34.79■■■■□ 3.16
KRT18-201ENST00000388835 PELP1Q8IZL8 1130 aaKnown RBP34.79■■■■□ 3.16
KRT18-201ENST00000388835 MTHFSP49914 203 aa34.78■■■■□ 3.16
KRT18-201ENST00000388835 UTRNP46939 3433 aa34.77■■■■□ 3.16
KRT18-201ENST00000388835 PER1O15534 1290 aaPredicted RBP34.77■■■■□ 3.16
KRT18-201ENST00000388835 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.76■■■■□ 3.16
KRT18-201ENST00000388835 CNGB1Q14028 1251 aaPredicted RBP34.76■■■■□ 3.16
KRT18-201ENST00000388835 C1orf141Q5JVX7 400 aa34.76■■■■□ 3.16
KRT18-201ENST00000388835 KDM6AO15550 1401 aaPredicted RBP34.76■■■■□ 3.15
KRT18-201ENST00000388835 CHD4Q14839 1912 aa34.74■■■■□ 3.15
KRT18-201ENST00000388835 CABP4P57796 275 aa34.74■■■■□ 3.15
KRT18-201ENST00000388835 RBM42Q9BTD8 480 aaKnown RBP34.74■■■■□ 3.15
KRT18-201ENST00000388835 GNPATO15228 680 aa34.73■■■■□ 3.15
KRT18-201ENST00000388835 KDRP35968 1356 aa34.73■■■■□ 3.15
KRT18-201ENST00000388835 SSFA2P28290 1259 aa34.71■■■■□ 3.15
KRT18-201ENST00000388835 SLC4A9Q96Q91 983 aa34.69■■■■□ 3.14
KRT18-201ENST00000388835 HMOX1P09601 288 aa34.68■■■■□ 3.14
KRT18-201ENST00000388835 NFATC2IPQ8NCF5 419 aa34.65■■■■□ 3.14
KRT18-201ENST00000388835 DIAPH1O60610 1272 aaKnown RBP34.63■■■■□ 3.13
KRT18-201ENST00000388835 SCN11AQ9UI33 1791 aa34.63■■■■□ 3.13
KRT18-201ENST00000388835 ZNF831Q5JPB2 1677 aa34.62■■■■□ 3.13
KRT18-201ENST00000388835 PTCD1O75127 700 aaKnown RBP34.62■■■■□ 3.13
KRT18-201ENST00000388835 ZNF784Q8NCA9 323 aaPredicted RBP34.62■■■■□ 3.13
KRT18-201ENST00000388835 COL5A3P25940 1745 aaPredicted RBP34.61■■■■□ 3.13
KRT18-201ENST00000388835 CD2APQ9Y5K6 639 aa34.61■■■■□ 3.13
KRT18-201ENST00000388835 GOLGB1Q14789 3259 aaKnown RBP34.6■■■■□ 3.13
KRT18-201ENST00000388835 AKAP4Q5JQC9 854 aa34.6■■■■□ 3.13
KRT18-201ENST00000388835 RTCBQ9Y3I0 505 aaKnown RBP34.6■■■■□ 3.13
KRT18-201ENST00000388835 YBX3P16989 372 aaKnown RBP eCLIP34.59■■■■□ 3.138e-11■■□□□ 11.5
KRT18-201ENST00000388835 NPC1L1Q9UHC9 1359 aa34.57■■■■□ 3.13
KRT18-201ENST00000388835 TRAPPC3LQ5T215 181 aa34.57■■■■□ 3.12
KRT18-201ENST00000388835 LGR6Q9HBX8 967 aa34.56■■■■□ 3.12
KRT18-201ENST00000388835 RC3H1Q5TC82 1133 aaKnown RBP34.55■■■■□ 3.12
KRT18-201ENST00000388835 VIRMAQ69YN4 1812 aaKnown RBP34.55■■■■□ 3.12
KRT18-201ENST00000388835 CNTNAP4Q9C0A0 1308 aa34.55■■■■□ 3.12
KRT18-201ENST00000388835 MYH14Q7Z406 1995 aaKnown RBP34.54■■■■□ 3.12
KRT18-201ENST00000388835 MTHFSDQ2M296 383 aaKnown RBP34.53■■■■□ 3.12
KRT18-201ENST00000388835 U2SURPO15042 1029 aaKnown RBP34.52■■■■□ 3.12
KRT18-201ENST00000388835 GRIN3BO60391 1043 aa34.52■■■■□ 3.12
KRT18-201ENST00000388835 ARHGEF1Q92888 912 aaKnown RBP34.52■■■■□ 3.12
KRT18-201ENST00000388835 SLC52A2Q9HAB3 445 aa34.52■■■■□ 3.12
KRT18-201ENST00000388835 COL3A1P02461 1466 aaPredicted RBP34.51■■■■□ 3.12
KRT18-201ENST00000388835 RNMTO43148 476 aaKnown RBP34.51■■■■□ 3.12
KRT18-201ENST00000388835 RPS6KA4O75676 772 aa34.5■■■■□ 3.11
KRT18-201ENST00000388835 MMP10P09238 476 aa34.5■■■■□ 3.11
KRT18-201ENST00000388835 TJP1Q07157 1748 aa34.49■■■■□ 3.11
KRT18-201ENST00000388835 WWC3Q9ULE0 1092 aa34.49■■■■□ 3.11
KRT18-201ENST00000388835 ADRA2BP18089 450 aa34.49■■■■□ 3.11
KRT18-201ENST00000388835 CRKLP46109 303 aaKnown RBP34.49■■■■□ 3.11
KRT18-201ENST00000388835 RFC4P35249 363 aa34.48■■■■□ 3.11
KRT18-201ENST00000388835 SLC39A6Q13433 755 aa34.45■■■■□ 3.11
KRT18-201ENST00000388835 C4AP0C0L4 1744 aa34.45■■■■□ 3.11
KRT18-201ENST00000388835 NLGN1Q8N2Q7 840 aa34.45■■■■□ 3.1
KRT18-201ENST00000388835 MRC1P22897 1456 aa34.44■■■■□ 3.1
KRT18-201ENST00000388835 GYS1P13807 737 aa34.43■■■■□ 3.1
KRT18-201ENST00000388835 CICQ96RK0 1608 aaPredicted RBP34.42■■■■□ 3.1
KRT18-201ENST00000388835 DNAJC10Q8IXB1 793 aa34.41■■■■□ 3.1
KRT18-201ENST00000388835 ADAMTS7Q9UKP4 1686 aa34.41■■■■□ 3.1
KRT18-201ENST00000388835 SRP68Q9UHB9 627 aaKnown RBP34.39■■■■□ 3.1
KRT18-201ENST00000388835 INTS5Q6P9B9 1019 aaKnown RBP34.38■■■■□ 3.09
KRT18-201ENST00000388835 CFAP53Q96M91 514 aa34.38■■■■□ 3.09
KRT18-201ENST00000388835 KIF13BQ9NQT8 1826 aa34.36■■■■□ 3.09
KRT18-201ENST00000388835 CCDC87Q9NVE4 849 aa34.36■■■■□ 3.09
KRT18-201ENST00000388835 KCPQ6ZWJ8 1503 aa34.36■■■■□ 3.09
KRT18-201ENST00000388835 PARP3Q9Y6F1 533 aa34.35■■■■□ 3.09
KRT18-201ENST00000388835 N4BP2Q86UW6 1770 aaPredicted RBP34.34■■■■□ 3.09
KRT18-201ENST00000388835 GAS2L2Q8NHY3 880 aa34.34■■■■□ 3.09
KRT18-201ENST00000388835 GNAT3A8MTJ3 354 aa34.32■■■■□ 3.09
KRT18-201ENST00000388835 USP42Q9H9J4 1324 aaKnown RBP34.32■■■■□ 3.08
KRT18-201ENST00000388835 PXDNLA1KZ92 1463 aa34.32■■■■□ 3.08
KRT18-201ENST00000388835 CYP19A1P11511 503 aaPredicted RBP34.32■■■■□ 3.08
KRT18-201ENST00000388835 PPP2R1AP30153 589 aa34.32■■■■□ 3.08
KRT18-201ENST00000388835 C10orf71Q711Q0 1435 aa34.31■■■■□ 3.08
KRT18-201ENST00000388835 PRKAR2BP31323 418 aa34.31■■■■□ 3.08
KRT18-201ENST00000388835 FKBP8Q14318 412 aa34.31■■■■□ 3.08
KRT18-201ENST00000388835 IL17REQ8NFR9 667 aa34.31■■■■□ 3.08
KRT18-201ENST00000388835 KIAA1551Q9HCM1 1747 aa34.3■■■■□ 3.08
KRT18-201ENST00000388835 TEFQ10587 303 aa34.3■■■■□ 3.08
KRT18-201ENST00000388835 A0A0G2JLW4 131 aa34.29■■■■□ 3.08
KRT18-201ENST00000388835 TTC5Q8N0Z6 440 aa34.29■■■■□ 3.08
KRT18-201ENST00000388835 PHACTR3Q96KR7 559 aa34.29■■■■□ 3.08
KRT18-201ENST00000388835 NUDCQ9Y266 331 aa34.29■■■■□ 3.08
KRT18-201ENST00000388835 UBR2Q8IWV8 1755 aa34.29■■■■□ 3.08
KRT18-201ENST00000388835 TGFB2P61812 414 aa34.28■■■■□ 3.08
KRT18-201ENST00000388835 RSPH6AQ9H0K4 717 aa34.28■■■■□ 3.08
KRT18-201ENST00000388835 SOS1Q07889 1333 aaPredicted RBP34.27■■■■□ 3.08
KRT18-201ENST00000388835 ZPR1O75312 459 aa34.26■■■■□ 3.07
KRT18-201ENST00000388835 ZBTB1Q9Y2K1 713 aa34.26■■■■□ 3.07
KRT18-201ENST00000388835 U2AF1L5P0DN76 240 aaPredicted RBP34.25■■■■□ 3.07
KRT18-201ENST00000388835 U2AF1Q01081 240 aaKnown RBP eCLIP34.25■■■■□ 3.07
KRT18-201ENST00000388835 USPL1Q5W0Q7 1092 aa34.25■■■■□ 3.07
KRT18-201ENST00000388835 VSIG10Q8N0Z9 540 aa34.25■■■■□ 3.07
KRT18-201ENST00000388835 DDR1Q08345 913 aa34.24■■■■□ 3.07
KRT18-201ENST00000388835 ATP10DQ9P241 1426 aa34.24■■■■□ 3.07
KRT18-201ENST00000388835 SIPA1L3O60292 1781 aaPredicted RBP34.24■■■■□ 3.07
KRT18-201ENST00000388835 GIGYF1O75420 1035 aaPredicted RBP34.23■■■■□ 3.07
KRT18-201ENST00000388835 DPEP1P16444 411 aa34.23■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms