RNA–Protein interactions for RNA: ENST00000386847.1

SNORA48-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48-201ENST00000386847 RBM42Q9BTD8 480 aaKnown RBP13□□□□□ -0.33
SNORA48-201ENST00000386847 ASAP1Q9ULH1 1129 aa13□□□□□ -0.33
SNORA48-201ENST00000386847 RTCBQ9Y3I0 505 aaKnown RBP13□□□□□ -0.33
SNORA48-201ENST00000386847 IGSF1Q8N6C5 1336 aa12.99□□□□□ -0.33
SNORA48-201ENST00000386847 YBX3P16989 372 aaKnown RBP eCLIP12.99□□□□□ -0.33
SNORA48-201ENST00000386847 TRAPPC3LQ5T215 181 aa12.99□□□□□ -0.33
SNORA48-201ENST00000386847 ZNF530Q6P9A1 599 aaPredicted RBP12.99□□□□□ -0.33
SNORA48-201ENST00000386847 ITGB4P16144 1822 aa12.99□□□□□ -0.33
SNORA48-201ENST00000386847 TOGARAM1Q9Y4F4 1720 aa12.99□□□□□ -0.33
SNORA48-201ENST00000386847 ADRA2BP18089 450 aa12.98□□□□□ -0.33
SNORA48-201ENST00000386847 MTHFSP49914 203 aa12.98□□□□□ -0.33
SNORA48-201ENST00000386847 LINC00116Q8NCU8 138 aa12.98□□□□□ -0.33
SNORA48-201ENST00000386847 ATG3Q9NT62 314 aa12.98□□□□□ -0.33
SNORA48-201ENST00000386847 TAF1LQ8IZX4 1826 aa12.97□□□□□ -0.33
SNORA48-201ENST00000386847 RFC4P35249 363 aa12.97□□□□□ -0.33
SNORA48-201ENST00000386847 NLGN1Q8N2Q7 840 aa12.97□□□□□ -0.33
SNORA48-201ENST00000386847 GPBP1L1Q9HC44 474 aaPredicted RBP12.97□□□□□ -0.33
SNORA48-201ENST00000386847 MMP10P09238 476 aa12.95□□□□□ -0.34
SNORA48-201ENST00000386847 ITPK1Q13572 414 aa12.95□□□□□ -0.34
SNORA48-201ENST00000386847 SULT6B1Q6IMI4 303 aa12.95□□□□□ -0.34
SNORA48-201ENST00000386847 GOLGB1Q14789 3259 aaKnown RBP12.94□□□□□ -0.34
SNORA48-201ENST00000386847 RC3H1Q5TC82 1133 aaKnown RBP12.94□□□□□ -0.34
SNORA48-201ENST00000386847 CCDC87Q9NVE4 849 aa12.94□□□□□ -0.34
SNORA48-201ENST00000386847 PARP3Q9Y6F1 533 aa12.94□□□□□ -0.34
SNORA48-201ENST00000386847 UBR3Q6ZT12 1888 aa12.93□□□□□ -0.34
SNORA48-201ENST00000386847 CNTNAP4Q9C0A0 1308 aa12.93□□□□□ -0.34
SNORA48-201ENST00000386847 TGFB2P61812 414 aa12.93□□□□□ -0.34
SNORA48-201ENST00000386847 WWC3Q9ULE0 1092 aa12.93□□□□□ -0.34
SNORA48-201ENST00000386847 ATP10DQ9P241 1426 aa12.93□□□□□ -0.34
SNORA48-201ENST00000386847 PTCD1O75127 700 aaKnown RBP12.92□□□□□ -0.34
SNORA48-201ENST00000386847 SMIM5Q71RC9 77 aa12.92□□□□□ -0.34
SNORA48-201ENST00000386847 AMIGO3Q86WK7 504 aa12.92□□□□□ -0.34
SNORA48-201ENST00000386847 RPS6KA4O75676 772 aa12.91□□□□□ -0.34
SNORA48-201ENST00000386847 AKAP4Q5JQC9 854 aa12.91□□□□□ -0.34
SNORA48-201ENST00000386847 AEBP1Q8IUX7 1158 aa12.91□□□□□ -0.34
SNORA48-201ENST00000386847 NFATC2IPQ8NCF5 419 aa12.91□□□□□ -0.34
SNORA48-201ENST00000386847 ZNF526Q8TF50 670 aaPredicted RBP12.91□□□□□ -0.34
SNORA48-201ENST00000386847 ARHGEF1Q92888 912 aaKnown RBP12.91□□□□□ -0.34
SNORA48-201ENST00000386847 KDRP35968 1356 aa12.91□□□□□ -0.34
SNORA48-201ENST00000386847 BCS1LQ9Y276 419 aa12.9□□□□□ -0.34
SNORA48-201ENST00000386847 ZNF831Q5JPB2 1677 aa12.89□□□□□ -0.35
SNORA48-201ENST00000386847 KDM6AO15550 1401 aaPredicted RBP12.88□□□□□ -0.35
SNORA48-201ENST00000386847 DIAPH1O60610 1272 aaKnown RBP12.88□□□□□ -0.35
SNORA48-201ENST00000386847 ZPR1O75312 459 aa12.88□□□□□ -0.35
SNORA48-201ENST00000386847 IL13P35225 146 aa12.88□□□□□ -0.35
SNORA48-201ENST00000386847 CRKLP46109 303 aaKnown RBP12.88□□□□□ -0.35
SNORA48-201ENST00000386847 FCHSD2O94868 740 aa12.87□□□□□ -0.35
SNORA48-201ENST00000386847 GYS1P13807 737 aa12.87□□□□□ -0.35
SNORA48-201ENST00000386847 ARHGAP27Q6ZUM4 889 aa12.87□□□□□ -0.35
SNORA48-201ENST00000386847 CICQ96RK0 1608 aaPredicted RBP12.87□□□□□ -0.35
SNORA48-201ENST00000386847 KIF7Q2M1P5 1343 aa12.87□□□□□ -0.35
SNORA48-201ENST00000386847 A0A0G2JLW4 131 aa12.86□□□□□ -0.35
SNORA48-201ENST00000386847 AMER1Q5JTC6 1135 aaPredicted RBP12.86□□□□□ -0.35
SNORA48-201ENST00000386847 CC2D1BQ5T0F9 858 aaKnown RBP12.86□□□□□ -0.35
SNORA48-201ENST00000386847 NPM2Q86SE8 214 aaKnown RBP12.86□□□□□ -0.35
SNORA48-201ENST00000386847 TTC5Q8N0Z6 440 aa12.86□□□□□ -0.35
SNORA48-201ENST00000386847 SLC4A9Q96Q91 983 aa12.86□□□□□ -0.35
SNORA48-201ENST00000386847 SLC52A2Q9HAB3 445 aa12.86□□□□□ -0.35
SNORA48-201ENST00000386847 PXDNLA1KZ92 1463 aa12.85□□□□□ -0.35
SNORA48-201ENST00000386847 ADCY9O60503 1353 aa12.85□□□□□ -0.35
SNORA48-201ENST00000386847 HMOX1P09601 288 aa12.85□□□□□ -0.35
SNORA48-201ENST00000386847 PIM2Q9P1W9 311 aa12.85□□□□□ -0.35
SNORA48-201ENST00000386847 C10orf71Q711Q0 1435 aa12.85□□□□□ -0.35
SNORA48-201ENST00000386847 USP42Q9H9J4 1324 aaKnown RBP12.85□□□□□ -0.35
SNORA48-201ENST00000386847 DPEP1P16444 411 aa12.84□□□□□ -0.35
SNORA48-201ENST00000386847 C4AP0C0L4 1744 aa12.83□□□□□ -0.36
SNORA48-201ENST00000386847 COL5A3P25940 1745 aaPredicted RBP12.83□□□□□ -0.36
SNORA48-201ENST00000386847 U2SURPO15042 1029 aaKnown RBP12.83□□□□□ -0.36
SNORA48-201ENST00000386847 CNGB1Q14028 1251 aaPredicted RBP12.83□□□□□ -0.36
SNORA48-201ENST00000386847 DALRD3Q5D0E6 543 aaKnown RBP12.83□□□□□ -0.36
SNORA48-201ENST00000386847 C16orf71Q8IYS4 520 aaPredicted RBP12.83□□□□□ -0.36
SNORA48-201ENST00000386847 CFAP53Q96M91 514 aa12.83□□□□□ -0.36
SNORA48-201ENST00000386847 RNMTO43148 476 aaKnown RBP12.82□□□□□ -0.36
SNORA48-201ENST00000386847 STARD3NLO95772 234 aa12.82□□□□□ -0.36
SNORA48-201ENST00000386847 HSPA6P17066 643 aa12.82□□□□□ -0.36
SNORA48-201ENST00000386847 TEFQ10587 303 aa12.82□□□□□ -0.36
SNORA48-201ENST00000386847 DNAJC10Q8IXB1 793 aa12.82□□□□□ -0.36
SNORA48-201ENST00000386847 VSIG10Q8N0Z9 540 aa12.82□□□□□ -0.36
SNORA48-201ENST00000386847 GAS2L2Q8NHY3 880 aa12.82□□□□□ -0.36
SNORA48-201ENST00000386847 SRP68Q9UHB9 627 aaKnown RBP12.82□□□□□ -0.36
SNORA48-201ENST00000386847 FKBP8Q14318 412 aa12.81□□□□□ -0.36
SNORA48-201ENST00000386847 MTHFSDQ2M296 383 aaKnown RBP12.81□□□□□ -0.36
SNORA48-201ENST00000386847 USPL1Q5W0Q7 1092 aa12.81□□□□□ -0.36
SNORA48-201ENST00000386847 LGR6Q9HBX8 967 aa12.81□□□□□ -0.36
SNORA48-201ENST00000386847 A0A087WZG4 1122 aa12.8□□□□□ -0.36
SNORA48-201ENST00000386847 SLC39A6Q13433 755 aa12.8□□□□□ -0.36
SNORA48-201ENST00000386847 INTS5Q6P9B9 1019 aaKnown RBP12.8□□□□□ -0.36
SNORA48-201ENST00000386847 TEX13AQ9BXU3 409 aaPredicted RBP12.8□□□□□ -0.36
SNORA48-201ENST00000386847 NUDCQ9Y266 331 aa12.8□□□□□ -0.36
SNORA48-201ENST00000386847 KDM2BQ8NHM5 1336 aa12.8□□□□□ -0.36
SNORA48-201ENST00000386847 SCN11AQ9UI33 1791 aa12.79□□□□□ -0.36
SNORA48-201ENST00000386847 KIF13BQ9NQT8 1826 aa12.79□□□□□ -0.36
SNORA48-201ENST00000386847 GNAT3A8MTJ3 354 aa12.79□□□□□ -0.36
SNORA48-201ENST00000386847 NPHP1O15259 732 aa12.79□□□□□ -0.36
SNORA48-201ENST00000386847 CYP19A1P11511 503 aaPredicted RBP12.79□□□□□ -0.36
SNORA48-201ENST00000386847 NARFQ9UHQ1 456 aa12.79□□□□□ -0.36
SNORA48-201ENST00000386847 SOS1Q07889 1333 aaPredicted RBP12.79□□□□□ -0.36
SNORA48-201ENST00000386847 COL15A1P39059 1388 aa12.79□□□□□ -0.36
SNORA48-201ENST00000386847 NPC1L1Q9UHC9 1359 aa12.79□□□□□ -0.36
SNORA48-201ENST00000386847 MRC1P22897 1456 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms