RNA–Protein interactions for RNA: ENST00000382519.8

CD9-204, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-204ENST00000382519 COL3A1P02461 1466 aaPredicted RBP24.61■■□□□ 1.53
CD9-204ENST00000382519 SYT17Q9BSW7 474 aa24.6■■□□□ 1.53
CD9-204ENST00000382519 ATG3Q9NT62 314 aa24.6■■□□□ 1.53
CD9-204ENST00000382519 ATP6V1AP38606 617 aa24.59■■□□□ 1.53
CD9-204ENST00000382519 CABP4P57796 275 aa24.59■■□□□ 1.53
CD9-204ENST00000382519 KLHL34Q8N239 644 aa24.59■■□□□ 1.53
CD9-204ENST00000382519 LINC00116Q8NCU8 138 aa24.58■■□□□ 1.53
CD9-204ENST00000382519 FLAD1Q8NFF5 587 aa24.58■■□□□ 1.53
CD9-204ENST00000382519 ZNF831Q5JPB2 1677 aa24.57■■□□□ 1.52
CD9-204ENST00000382519 PHF14O94880 888 aa24.57■■□□□ 1.52
CD9-204ENST00000382519 MSL1Q68DK7 614 aa24.57■■□□□ 1.52
CD9-204ENST00000382519 ITPK1Q13572 414 aa24.56■■□□□ 1.52
CD9-204ENST00000382519 RBM42Q9BTD8 480 aaKnown RBP24.56■■□□□ 1.52
CD9-204ENST00000382519 MAP3K5Q99683 1374 aa24.55■■□□□ 1.52
CD9-204ENST00000382519 COL5A3P25940 1745 aaPredicted RBP24.55■■□□□ 1.52
CD9-204ENST00000382519 U2SURPO15042 1029 aaKnown RBP24.55■■□□□ 1.52
CD9-204ENST00000382519 AKAP4Q5JQC9 854 aa24.54■■□□□ 1.52
CD9-204ENST00000382519 AMIGO3Q86WK7 504 aa24.53■■□□□ 1.52
CD9-204ENST00000382519 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.52■■□□□ 1.52
CD9-204ENST00000382519 GNPATO15228 680 aa24.52■■□□□ 1.52
CD9-204ENST00000382519 SMIM5Q71RC9 77 aa24.52■■□□□ 1.52
CD9-204ENST00000382519 NFATC2IPQ8NCF5 419 aa24.52■■□□□ 1.52
CD9-204ENST00000382519 SSFA2P28290 1259 aa24.51■■□□□ 1.51
CD9-204ENST00000382519 CFAP53Q96M91 514 aa24.51■■□□□ 1.51
CD9-204ENST00000382519 MTHFSDQ2M296 383 aaKnown RBP24.49■■□□□ 1.51
CD9-204ENST00000382519 SLC4A9Q96Q91 983 aa24.49■■□□□ 1.51
CD9-204ENST00000382519 MRC1P22897 1456 aa24.49■■□□□ 1.51
CD9-204ENST00000382519 ADAMTS7Q9UKP4 1686 aa24.49■■□□□ 1.51
CD9-204ENST00000382519 TJP1Q07157 1748 aa24.49■■□□□ 1.51
CD9-204ENST00000382519 PTCD1O75127 700 aaKnown RBP24.48■■□□□ 1.51
CD9-204ENST00000382519 PPP2R1AP30153 589 aa24.47■■□□□ 1.51
CD9-204ENST00000382519 LGR6Q9HBX8 967 aa24.47■■□□□ 1.51
CD9-204ENST00000382519 CICQ96RK0 1608 aaPredicted RBP24.46■■□□□ 1.51
CD9-204ENST00000382519 RNMTO43148 476 aaKnown RBP24.46■■□□□ 1.51
CD9-204ENST00000382519 YY1P25490 414 aa24.46■■□□□ 1.51
CD9-204ENST00000382519 SLC52A2Q9HAB3 445 aa24.46■■□□□ 1.51
CD9-204ENST00000382519 MYH14Q7Z406 1995 aaKnown RBP24.45■■□□□ 1.51
CD9-204ENST00000382519 CNTNAP4Q9C0A0 1308 aa24.44■■□□□ 1.5
CD9-204ENST00000382519 RTCBQ9Y3I0 505 aaKnown RBP24.44■■□□□ 1.5
CD9-204ENST00000382519 C4AP0C0L4 1744 aa24.44■■□□□ 1.5
CD9-204ENST00000382519 NLGN2Q8NFZ4 835 aa24.43■■□□□ 1.5
CD9-204ENST00000382519 CHD4Q14839 1912 aa24.42■■□□□ 1.5
CD9-204ENST00000382519 PELP1Q8IZL8 1130 aaKnown RBP24.42■■□□□ 1.5
CD9-204ENST00000382519 NUDCQ9Y266 331 aa24.42■■□□□ 1.5
CD9-204ENST00000382519 GPR162Q16538 588 aa24.41■■□□□ 1.5
CD9-204ENST00000382519 GAS2L2Q8NHY3 880 aa24.41■■□□□ 1.5
CD9-204ENST00000382519 TRAPPC3LQ5T215 181 aa24.4■■□□□ 1.5
CD9-204ENST00000382519 RC3H1Q5TC82 1133 aaKnown RBP24.4■■□□□ 1.5
CD9-204ENST00000382519 UBR2Q8IWV8 1755 aa24.39■■□□□ 1.5
CD9-204ENST00000382519 PRKAR2BP31323 418 aa24.39■■□□□ 1.49
CD9-204ENST00000382519 SLC39A6Q13433 755 aa24.39■■□□□ 1.49
CD9-204ENST00000382519 U2AF1L5P0DN76 240 aaPredicted RBP24.38■■□□□ 1.49
CD9-204ENST00000382519 CRKLP46109 303 aaKnown RBP24.38■■□□□ 1.49
CD9-204ENST00000382519 U2AF1Q01081 240 aaKnown RBP eCLIP24.38■■□□□ 1.49
CD9-204ENST00000382519 RSPH6AQ9H0K4 717 aa24.38■■□□□ 1.49
CD9-204ENST00000382519 KCPQ6ZWJ8 1503 aa24.38■■□□□ 1.49
CD9-204ENST00000382519 SIPA1L3O60292 1781 aaPredicted RBP24.38■■□□□ 1.49
CD9-204ENST00000382519 GNAT3A8MTJ3 354 aa24.37■■□□□ 1.49
CD9-204ENST00000382519 RPS6KA4O75676 772 aa24.37■■□□□ 1.49
CD9-204ENST00000382519 ADRA2BP18089 450 aa24.37■■□□□ 1.49
CD9-204ENST00000382519 ARHGEF1Q92888 912 aaKnown RBP24.36■■□□□ 1.49
CD9-204ENST00000382519 RFC4P35249 363 aa24.35■■□□□ 1.49
CD9-204ENST00000382519 TEFQ10587 303 aa24.35■■□□□ 1.49
CD9-204ENST00000382519 PHACTR3Q96KR7 559 aa24.35■■□□□ 1.49
CD9-204ENST00000382519 CD2APQ9Y5K6 639 aa24.35■■□□□ 1.49
CD9-204ENST00000382519 DNAJC10Q8IXB1 793 aa24.34■■□□□ 1.49
CD9-204ENST00000382519 MMP10P09238 476 aa24.32■■□□□ 1.48
CD9-204ENST00000382519 TTC5Q8N0Z6 440 aa24.32■■□□□ 1.48
CD9-204ENST00000382519 IL17REQ8NFR9 667 aa24.32■■□□□ 1.48
CD9-204ENST00000382519 NLGN1Q8N2Q7 840 aa24.31■■□□□ 1.48
CD9-204ENST00000382519 CCDC87Q9NVE4 849 aa24.31■■□□□ 1.48
CD9-204ENST00000382519 KIF13BQ9NQT8 1826 aa24.29■■□□□ 1.48
CD9-204ENST00000382519 FCHSD2O94868 740 aa24.29■■□□□ 1.48
CD9-204ENST00000382519 GYS1P13807 737 aa24.29■■□□□ 1.48
CD9-204ENST00000382519 INTS5Q6P9B9 1019 aaKnown RBP24.29■■□□□ 1.48
CD9-204ENST00000382519 YBX3P16989 372 aaKnown RBP eCLIP24.28■■□□□ 1.48
CD9-204ENST00000382519 CEMIPQ8WUJ3 1361 aa24.28■■□□□ 1.48
CD9-204ENST00000382519 CYP19A1P11511 503 aaPredicted RBP24.27■■□□□ 1.48
CD9-204ENST00000382519 VSIG10Q8N0Z9 540 aa24.27■■□□□ 1.48
CD9-204ENST00000382519 SRP68Q9UHB9 627 aaKnown RBP24.27■■□□□ 1.48
CD9-204ENST00000382519 USP42Q9H9J4 1324 aaKnown RBP24.26■■□□□ 1.47
CD9-204ENST00000382519 DLG5Q8TDM6 1919 aa24.25■■□□□ 1.47
CD9-204ENST00000382519 DDX10Q13206 875 aaKnown RBP24.25■■□□□ 1.47
CD9-204ENST00000382519 ZNF790Q6PG37 636 aa24.25■■□□□ 1.47
CD9-204ENST00000382519 RTF1Q92541 710 aaKnown RBP24.25■■□□□ 1.47
CD9-204ENST00000382519 SOS1Q07889 1333 aaPredicted RBP24.25■■□□□ 1.47
CD9-204ENST00000382519 N4BP2Q86UW6 1770 aaPredicted RBP24.24■■□□□ 1.47
CD9-204ENST00000382519 GRIN3BO60391 1043 aa24.24■■□□□ 1.47
CD9-204ENST00000382519 ZNF496Q96IT1 587 aaPredicted RBP24.24■■□□□ 1.47
CD9-204ENST00000382519 WWC3Q9ULE0 1092 aa24.24■■□□□ 1.47
CD9-204ENST00000382519 ZBTB1Q9Y2K1 713 aa24.24■■□□□ 1.47
CD9-204ENST00000382519 PARP3Q9Y6F1 533 aa24.24■■□□□ 1.47
CD9-204ENST00000382519 COL15A1P39059 1388 aa24.24■■□□□ 1.47
CD9-204ENST00000382519 KIAA1551Q9HCM1 1747 aa24.24■■□□□ 1.47
CD9-204ENST00000382519 NEFMP07197 916 aa24.23■■□□□ 1.47
CD9-204ENST00000382519 HEG1Q9ULI3 1381 aa24.23■■□□□ 1.47
CD9-204ENST00000382519 C10orf71Q711Q0 1435 aa24.23■■□□□ 1.47
CD9-204ENST00000382519 BTBD11A6QL63 1104 aa24.22■■□□□ 1.47
CD9-204ENST00000382519 MCM10Q7L590 875 aa24.22■■□□□ 1.47
CD9-204ENST00000382519 ZPR1O75312 459 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms