RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 ATP8B2P98198 1209 aa19.99■□□□□ 0.79
VPS16-203ENST00000380469 MCTP1Q6DN14 999 aa19.99■□□□□ 0.79
VPS16-203ENST00000380469 CYP2E1P05181 493 aaPredicted RBP19.99■□□□□ 0.79
VPS16-203ENST00000380469 CLCN1P35523 988 aa19.99■□□□□ 0.79
VPS16-203ENST00000380469 AK9Q5TCS8 1911 aa19.98■□□□□ 0.79
VPS16-203ENST00000380469 TRIM44Q96DX7 344 aaPredicted RBP19.98■□□□□ 0.79
VPS16-203ENST00000380469 HOXC9P31274 260 aa19.98■□□□□ 0.79
VPS16-203ENST00000380469 NECTIN2Q92692 538 aa19.98■□□□□ 0.79
VPS16-203ENST00000380469 BABAM1Q9NWV8 329 aa19.98■□□□□ 0.79
VPS16-203ENST00000380469 SLIT1O75093 1534 aa19.98■□□□□ 0.79
VPS16-203ENST00000380469 RGPD8O14715 1765 aaPredicted RBP19.98■□□□□ 0.79
VPS16-203ENST00000380469 IBTKQ9P2D0 1353 aaPredicted RBP19.97■□□□□ 0.79
VPS16-203ENST00000380469 PIK3C2AO00443 1686 aa19.97■□□□□ 0.79
VPS16-203ENST00000380469 MX1P20591 662 aa19.97■□□□□ 0.79
VPS16-203ENST00000380469 TAF7Q15545 349 aaPredicted RBP19.97■□□□□ 0.79
VPS16-203ENST00000380469 MCCP23508 829 aa19.97■□□□□ 0.79
VPS16-203ENST00000380469 ARHGAP23Q9P227 1491 aa19.96■□□□□ 0.79
VPS16-203ENST00000380469 MAP3K5Q99683 1374 aa19.96■□□□□ 0.79
VPS16-203ENST00000380469 SALL3Q9BXA9 1300 aa19.96■□□□□ 0.79
VPS16-203ENST00000380469 THEMISQ8N1K5 641 aaPredicted RBP19.96■□□□□ 0.79
VPS16-203ENST00000380469 ESYT1Q9BSJ8 1104 aa19.96■□□□□ 0.79
VPS16-203ENST00000380469 SRCIN1Q9C0H9 1055 aa19.96■□□□□ 0.79
VPS16-203ENST00000380469 LRRC37A3O60309 1634 aa19.95■□□□□ 0.78
VPS16-203ENST00000380469 PNMA6EA0A0J9YXQ4 647 aa19.95■□□□□ 0.78
VPS16-203ENST00000380469 NUTM2GQ5VZR2 741 aa19.95■□□□□ 0.78
VPS16-203ENST00000380469 ZGPATQ8N5A5 531 aaKnown RBP19.95■□□□□ 0.78
VPS16-203ENST00000380469 TRIM6-TRIM34B2RNG4 842 aa19.94■□□□□ 0.78
VPS16-203ENST00000380469 NCLP19338 710 aaKnown RBP19.94■□□□□ 0.78
VPS16-203ENST00000380469 MCM2P49736 904 aa19.94■□□□□ 0.78
VPS16-203ENST00000380469 NEK4P51957 841 aa19.94■□□□□ 0.78
VPS16-203ENST00000380469 IL17REQ8NFR9 667 aa19.94■□□□□ 0.78
VPS16-203ENST00000380469 ANP32BQ92688 251 aaKnown RBP19.94■□□□□ 0.78
VPS16-203ENST00000380469 ANKARQ7Z5J8 1434 aa19.94■□□□□ 0.78
VPS16-203ENST00000380469 TSHZ3Q63HK5 1081 aa19.94■□□□□ 0.78
VPS16-203ENST00000380469 PLPPR3Q6T4P5 718 aa19.94■□□□□ 0.78
VPS16-203ENST00000380469 LMBRD1Q9NUN5 540 aa19.94■□□□□ 0.78
VPS16-203ENST00000380469 LRRFIP2Q9Y608 721 aaKnown RBP19.94■□□□□ 0.78
VPS16-203ENST00000380469 CACNA1FO60840 1977 aa19.94■□□□□ 0.78
VPS16-203ENST00000380469 PKP1Q13835 747 aa19.93■□□□□ 0.78
VPS16-203ENST00000380469 ABTB2Q8N961 1025 aa19.93■□□□□ 0.78
VPS16-203ENST00000380469 RILPL2Q969X0 211 aa19.93■□□□□ 0.78
VPS16-203ENST00000380469 LTV1Q96GA3 475 aaPredicted RBP19.93■□□□□ 0.78
VPS16-203ENST00000380469 FAM208AQ9UK61 1670 aaKnown RBP19.93■□□□□ 0.78
VPS16-203ENST00000380469 ESPNB1AK53 854 aa19.93■□□□□ 0.78
VPS16-203ENST00000380469 STAP2Q9UGK3 403 aa19.93■□□□□ 0.78
VPS16-203ENST00000380469 XRN1Q8IZH2 1706 aaKnown RBP19.93■□□□□ 0.78
VPS16-203ENST00000380469 UBTFL1P0CB47 393 aaPredicted RBP19.92■□□□□ 0.78
VPS16-203ENST00000380469 NASPP49321 788 aaPredicted RBP19.92■□□□□ 0.78
VPS16-203ENST00000380469 CCDC173Q0VFZ6 552 aa19.92■□□□□ 0.78
VPS16-203ENST00000380469 CHMLP26374 656 aa19.91■□□□□ 0.78
VPS16-203ENST00000380469 PXDNLA1KZ92 1463 aa19.91■□□□□ 0.78
VPS16-203ENST00000380469 ZNF445P59923 1031 aa19.91■□□□□ 0.78
VPS16-203ENST00000380469 ANAPC15P60006 121 aa19.91■□□□□ 0.78
VPS16-203ENST00000380469 USP44Q9H0E7 712 aa19.91■□□□□ 0.78
VPS16-203ENST00000380469 HDGFL1Q5TGJ6 251 aa19.9■□□□□ 0.78
VPS16-203ENST00000380469 CAVIN1Q6NZI2 390 aaKnown RBP19.9■□□□□ 0.78
VPS16-203ENST00000380469 TMX3Q96JJ7 454 aa19.9■□□□□ 0.78
VPS16-203ENST00000380469 ANO2Q9NQ90 1003 aa19.9■□□□□ 0.78
VPS16-203ENST00000380469 PRPF40AO75400 957 aaKnown RBP19.9■□□□□ 0.78
VPS16-203ENST00000380469 AOX1Q06278 1338 aa19.89■□□□□ 0.78
VPS16-203ENST00000380469 ZDHHC9Q9Y397 364 aa19.89■□□□□ 0.77
VPS16-203ENST00000380469 NWD1Q149M9 1564 aa19.89■□□□□ 0.77
VPS16-203ENST00000380469 ZSCAN23Q3MJ62 389 aa19.88■□□□□ 0.77
VPS16-203ENST00000380469 C14orf37Q86TY3 774 aa19.88■□□□□ 0.77
VPS16-203ENST00000380469 RAB11FIP3O75154 756 aa19.88■□□□□ 0.77
VPS16-203ENST00000380469 SSH3Q8TE77 659 aa19.87■□□□□ 0.77
VPS16-203ENST00000380469 PPP1R9BQ96SB3 815 aa19.87■□□□□ 0.77
VPS16-203ENST00000380469 TUBGCP6Q96RT7 1819 aa19.87■□□□□ 0.77
VPS16-203ENST00000380469 KCNA6P17658 529 aa19.87■□□□□ 0.77
VPS16-203ENST00000380469 NAP1L5Q96NT1 182 aaPredicted RBP19.87■□□□□ 0.77
VPS16-203ENST00000380469 CHMP4AQ9BY43 222 aa19.87■□□□□ 0.77
VPS16-203ENST00000380469 N4BP2Q86UW6 1770 aaPredicted RBP19.86■□□□□ 0.77
VPS16-203ENST00000380469 USHBP1Q8N6Y0 703 aa19.86■□□□□ 0.77
VPS16-203ENST00000380469 PHAXQ9H814 394 aaKnown RBP19.86■□□□□ 0.77
VPS16-203ENST00000380469 CUL4AQ13619 759 aa19.85■□□□□ 0.77
VPS16-203ENST00000380469 PALD1Q9ULE6 856 aa19.85■□□□□ 0.77
VPS16-203ENST00000380469 EPB41L2O43491 1005 aaKnown RBP19.85■□□□□ 0.77
VPS16-203ENST00000380469 SURF6O75683 361 aaKnown RBP19.85■□□□□ 0.77
VPS16-203ENST00000380469 INTS4Q96HW7 963 aaKnown RBP19.85■□□□□ 0.77
VPS16-203ENST00000380469 IL1RAPL2Q9NP60 686 aa19.85■□□□□ 0.77
VPS16-203ENST00000380469 MARF1Q9Y4F3 1742 aaKnown RBP19.84■□□□□ 0.77
VPS16-203ENST00000380469 USP54Q70EL1 1684 aa19.84■□□□□ 0.77
VPS16-203ENST00000380469 ERBB4Q15303 1308 aa19.84■□□□□ 0.77
VPS16-203ENST00000380469 PPP1R42Q7Z4L9 355 aa19.84■□□□□ 0.77
VPS16-203ENST00000380469 EIF2S2P20042 333 aaKnown RBP19.84■□□□□ 0.77
VPS16-203ENST00000380469 NUTM1Q86Y26 1132 aa19.83■□□□□ 0.76
VPS16-203ENST00000380469 UNC5CLQ8IV45 518 aa19.83■□□□□ 0.76
VPS16-203ENST00000380469 GPT2Q8TD30 523 aa19.83■□□□□ 0.76
VPS16-203ENST00000380469 IP6K1Q92551 441 aa19.83■□□□□ 0.76
VPS16-203ENST00000380469 IL17RAQ96F46 866 aa19.83■□□□□ 0.76
VPS16-203ENST00000380469 POLA2Q14181 598 aa19.82■□□□□ 0.76
VPS16-203ENST00000380469 HOXB7P09629 217 aa19.82■□□□□ 0.76
VPS16-203ENST00000380469 FOXD4L5Q5VV16 416 aaPredicted RBP19.82■□□□□ 0.76
VPS16-203ENST00000380469 FOXD4L4Q8WXT5 416 aaPredicted RBP19.82■□□□□ 0.76
VPS16-203ENST00000380469 PHF8Q9UPP1 1060 aa19.82■□□□□ 0.76
VPS16-203ENST00000380469 CEMIPQ8WUJ3 1361 aa19.82■□□□□ 0.76
VPS16-203ENST00000380469 BRD1O95696 1058 aa19.81■□□□□ 0.76
VPS16-203ENST00000380469 EIF4A1P60842 406 aaKnown RBP19.81■□□□□ 0.76
VPS16-203ENST00000380469 KIF1BPQ96EK5 621 aa19.81■□□□□ 0.76
VPS16-203ENST00000380469 SRGAP3O43295 1099 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms