RNA–Protein interactions for RNA: ENST00000379802.7

DSP-201, Transcript of desmoplakin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DSP, Length 9,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-201ENST00000379802 UPF3BQ9BZI7 483 aaKnown RBP11.88□□□□□ -0.51
DSP-201ENST00000379802 DDX12PQ92771 950 aa11.88□□□□□ -0.51
DSP-201ENST00000379802 CEP126Q9P2H0 1117 aa11.88□□□□□ -0.51
DSP-201ENST00000379802 A0A087WZG4 1122 aa11.88□□□□□ -0.51
DSP-201ENST00000379802 FSD2A1L4K1 749 aa11.87□□□□□ -0.51
DSP-201ENST00000379802 ACTN2P35609 894 aa11.87□□□□□ -0.51
DSP-201ENST00000379802 STXBP4Q6ZWJ1 553 aa11.87□□□□□ -0.51
DSP-201ENST00000379802 MKNK2Q9HBH9 465 aa11.87□□□□□ -0.51
DSP-201ENST00000379802 GBP3Q9H0R5 595 aa11.87□□□□□ -0.51
DSP-201ENST00000379802 SYNCQ9H7C4 482 aa11.87□□□□□ -0.51
DSP-201ENST00000379802 BTBD11A6QL63 1104 aa11.87□□□□□ -0.51
DSP-201ENST00000379802 MAP3K9P80192 1104 aa11.87□□□□□ -0.51
DSP-201ENST00000379802 BLOC1S2Q6QNY1 142 aa11.87□□□□□ -0.51
DSP-201ENST00000379802 ATF7IPQ6VMQ6 1270 aa11.87□□□□□ -0.51
DSP-201ENST00000379802 C16orf71Q8IYS4 520 aaPredicted RBP11.87□□□□□ -0.51
DSP-201ENST00000379802 THEMISQ8N1K5 641 aaPredicted RBP11.87□□□□□ -0.51
DSP-201ENST00000379802 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.87□□□□□ -0.51
DSP-201ENST00000379802 ZMYND15Q9H091 742 aa11.87□□□□□ -0.51
DSP-201ENST00000379802 IDH1O75874 414 aaKnown RBP11.87□□□□□ -0.51
DSP-201ENST00000379802 PPP1R14CQ8TAE6 165 aa11.87□□□□□ -0.51
DSP-201ENST00000379802 GCC1Q96CN9 775 aa11.87□□□□□ -0.51
DSP-201ENST00000379802 ALS2CR12Q96Q35 445 aa11.87□□□□□ -0.51
DSP-201ENST00000379802 UTP14AQ9BVJ6 771 aaKnown RBP11.87□□□□□ -0.51
DSP-201ENST00000379802 AKAP2Q9Y2D5 859 aa11.87□□□□□ -0.51
DSP-201ENST00000379802 ARL1P40616 181 aaPredicted RBP11.86□□□□□ -0.51
DSP-201ENST00000379802 LMAN1P49257 510 aa11.86□□□□□ -0.51
DSP-201ENST00000379802 PRPF40AO75400 957 aaKnown RBP11.86□□□□□ -0.51
DSP-201ENST00000379802 GAPVD1Q14C86 1478 aa11.86□□□□□ -0.51
DSP-201ENST00000379802 TXNDC2Q86VQ3 553 aa11.86□□□□□ -0.51
DSP-201ENST00000379802 FANCD2Q9BXW9 1451 aa11.86□□□□□ -0.51
DSP-201ENST00000379802 DDX11Q96FC9 970 aa11.86□□□□□ -0.51
DSP-201ENST00000379802 KIF2AO00139 706 aaPredicted RBP11.86□□□□□ -0.51
DSP-201ENST00000379802 ABCF2Q9UG63 623 aa11.86□□□□□ -0.51
DSP-201ENST00000379802 KIF4AO95239 1232 aa11.86□□□□□ -0.51
DSP-201ENST00000379802 CCDC12Q8WUD4 166 aaPredicted RBP11.86□□□□□ -0.51
DSP-201ENST00000379802 KIF5CO60282 957 aa11.85□□□□□ -0.51
DSP-201ENST00000379802 NOP2P46087 812 aaKnown RBP11.85□□□□□ -0.51
DSP-201ENST00000379802 C6orf163Q5TEZ5 329 aa11.85□□□□□ -0.51
DSP-201ENST00000379802 BCCIPQ9P287 314 aaKnown RBP eCLIP11.85□□□□□ -0.51
DSP-201ENST00000379802 MYO1BO43795 1136 aa11.85□□□□□ -0.51
DSP-201ENST00000379802 PPP6R1Q9UPN7 881 aa11.85□□□□□ -0.51
DSP-201ENST00000379802 CFAP100Q494V2 611 aa11.85□□□□□ -0.51
DSP-201ENST00000379802 METTL24Q5JXM2 366 aa11.85□□□□□ -0.51
DSP-201ENST00000379802 CCDC175P0C221 793 aa11.85□□□□□ -0.51
DSP-201ENST00000379802 CTCFLQ8NI51 663 aaPredicted RBP11.85□□□□□ -0.51
DSP-201ENST00000379802 PRKRIP1Q9H875 184 aaPredicted RBP11.85□□□□□ -0.51
DSP-201ENST00000379802 TWISTNBQ3B726 338 aaPredicted RBP11.84□□□□□ -0.51
DSP-201ENST00000379802 BAG4O95429 457 aaKnown RBP11.84□□□□□ -0.51
DSP-201ENST00000379802 GGNBP2Q9H3C7 697 aa11.84□□□□□ -0.51
DSP-201ENST00000379802 SLC4A2P04920 1241 aa11.84□□□□□ -0.51
DSP-201ENST00000379802 PRKAR2BP31323 418 aa11.84□□□□□ -0.51
DSP-201ENST00000379802 SYCP3Q8IZU3 236 aa11.84□□□□□ -0.51
DSP-201ENST00000379802 ZNF354CQ86Y25 554 aa11.84□□□□□ -0.51
DSP-201ENST00000379802 VTI1AQ96AJ9 217 aa11.84□□□□□ -0.51
DSP-201ENST00000379802 ZSCAN31Q96LW9 406 aaPredicted RBP11.84□□□□□ -0.51
DSP-201ENST00000379802 PUF60Q9UHX1 559 aaKnown RBP11.84□□□□□ -0.51
DSP-201ENST00000379802 PDRG1Q9NUG6 133 aa11.84□□□□□ -0.51
DSP-201ENST00000379802 SAMM50Q9Y512 469 aa11.84□□□□□ -0.51
DSP-201ENST00000379802 BICD1Q96G01 975 aa11.83□□□□□ -0.51
DSP-201ENST00000379802 TIGD1Q96MW7 591 aa11.83□□□□□ -0.51
DSP-201ENST00000379802 EPRSP07814 1512 aaKnown RBP11.83□□□□□ -0.52
DSP-201ENST00000379802 NUP62CLQ9H1M0 184 aa11.83□□□□□ -0.52
DSP-201ENST00000379802 GOLGA4Q13439 2230 aaKnown RBP11.83□□□□□ -0.52
DSP-201ENST00000379802 OTUD6BQ8N6M0 293 aa11.83□□□□□ -0.52
DSP-201ENST00000379802 ZSCAN12O43309 604 aa11.83□□□□□ -0.52
DSP-201ENST00000379802 LIG1P18858 919 aa11.83□□□□□ -0.52
DSP-201ENST00000379802 NAPBQ9H115 298 aa11.83□□□□□ -0.52
DSP-201ENST00000379802 ODF2LQ9ULJ1 636 aa11.83□□□□□ -0.52
DSP-201ENST00000379802 SYNJ2O15056 1496 aa11.83□□□□□ -0.52
DSP-201ENST00000379802 MICALCLQ6ZW33 695 aa11.83□□□□□ -0.52
DSP-201ENST00000379802 SFPQP23246 707 aaKnown RBP eCLIP11.83□□□□□ -0.524e-7■■■■■ 30.9
DSP-201ENST00000379802 TMOD3Q9NYL9 352 aa11.83□□□□□ -0.52
DSP-201ENST00000379802 MYO10Q9HD67 2058 aa11.83□□□□□ -0.52
DSP-201ENST00000379802 PLVAPQ9BX97 442 aa11.83□□□□□ -0.52
DSP-201ENST00000379802 BRD4O60885 1362 aaPredicted RBP11.82□□□□□ -0.52
DSP-201ENST00000379802 TRAK2O60296 914 aa11.82□□□□□ -0.52
DSP-201ENST00000379802 IFIT1P09914 478 aaKnown RBP11.82□□□□□ -0.52
DSP-201ENST00000379802 USO1O60763 962 aaKnown RBP11.82□□□□□ -0.52
DSP-201ENST00000379802 CASTP20810 708 aaKnown RBP11.82□□□□□ -0.52
DSP-201ENST00000379802 KIF5BP33176 963 aa11.82□□□□□ -0.52
DSP-201ENST00000379802 NAA15Q9BXJ9 866 aaKnown RBP11.82□□□□□ -0.52
DSP-201ENST00000379802 SLC5A1P13866 664 aa11.82□□□□□ -0.52
DSP-201ENST00000379802 IQCA1Q86XH1 822 aa11.82□□□□□ -0.52
DSP-201ENST00000379802 FAM114A1Q8IWE2 563 aa11.82□□□□□ -0.52
DSP-201ENST00000379802 NUP88Q99567 741 aaPredicted RBP11.82□□□□□ -0.52
DSP-201ENST00000379802 TTC12Q9H892 705 aaPredicted RBP11.82□□□□□ -0.52
DSP-201ENST00000379802 PLEKHH2Q8IVE3 1493 aa11.82□□□□□ -0.52
DSP-201ENST00000379802 USP37Q86T82 979 aa11.82□□□□□ -0.52
DSP-201ENST00000379802 FAM135AQ9P2D6 1515 aa11.82□□□□□ -0.52
DSP-201ENST00000379802 SPECC1LQ69YQ0 1117 aa11.82□□□□□ -0.52
DSP-201ENST00000379802 CCDC172P0C7W6 258 aa11.82□□□□□ -0.52
DSP-201ENST00000379802 CASQ1P31415 396 aa11.82□□□□□ -0.52
DSP-201ENST00000379802 CCDC194A0A1B0GVG4 234 aa11.81□□□□□ -0.52
DSP-201ENST00000379802 CCDC174Q6PII3 467 aa11.81□□□□□ -0.52
DSP-201ENST00000379802 BMS1Q14692 1282 aaKnown RBP11.81□□□□□ -0.52
DSP-201ENST00000379802 ANKLE2Q86XL3 938 aa11.81□□□□□ -0.52
DSP-201ENST00000379802 SRGAP3O43295 1099 aa11.81□□□□□ -0.52
DSP-201ENST00000379802 CATIPQ7Z7H3 387 aa11.81□□□□□ -0.52
DSP-201ENST00000379802 CCDC83Q8IWF9 413 aa11.81□□□□□ -0.52
DSP-201ENST00000379802 RNF41Q9H4P4 317 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms