RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 FAM83GA6ND36 823 aa9.3□□□□□ -0.92
GPCPD1-201ENST00000379019 POTEAQ6S8J7 498 aa9.3□□□□□ -0.92
GPCPD1-201ENST00000379019 NPC1L1Q9UHC9 1359 aa9.3□□□□□ -0.92
GPCPD1-201ENST00000379019 EP400Q96L91 3159 aa9.29□□□□□ -0.92
GPCPD1-201ENST00000379019 GGNBP2Q9H3C7 697 aa9.29□□□□□ -0.92
GPCPD1-201ENST00000379019 PRDM11Q9NQV5 511 aa9.29□□□□□ -0.92
GPCPD1-201ENST00000379019 ZBTB40Q9NUA8 1239 aa9.29□□□□□ -0.92
GPCPD1-201ENST00000379019 E9PSI1 815 aa9.29□□□□□ -0.92
GPCPD1-201ENST00000379019 MVPQ14764 893 aaKnown RBP9.29□□□□□ -0.92
GPCPD1-201ENST00000379019 DISP2A7MBM2 1401 aa9.29□□□□□ -0.92
GPCPD1-201ENST00000379019 BRCA2P51587 3418 aa9.29□□□□□ -0.92
GPCPD1-201ENST00000379019 PDE3AQ14432 1141 aa9.28□□□□□ -0.92
GPCPD1-201ENST00000379019 GPT2Q8TD30 523 aa9.28□□□□□ -0.92
GPCPD1-201ENST00000379019 NAP1L5Q96NT1 182 aaPredicted RBP9.28□□□□□ -0.92
GPCPD1-201ENST00000379019 A0A1W2PP64 1363 aa9.28□□□□□ -0.92
GPCPD1-201ENST00000379019 DCTN1Q14203 1278 aa9.28□□□□□ -0.92
GPCPD1-201ENST00000379019 COL5A2P05997 1499 aaPredicted RBP9.28□□□□□ -0.92
GPCPD1-201ENST00000379019 GCP02774 474 aa9.28□□□□□ -0.92
GPCPD1-201ENST00000379019 CAMTA1Q9Y6Y1 1673 aa9.28□□□□□ -0.92
GPCPD1-201ENST00000379019 RBSNQ9H1K0 784 aa9.28□□□□□ -0.92
GPCPD1-201ENST00000379019 MAP2P11137 1827 aaKnown RBP9.28□□□□□ -0.92
GPCPD1-201ENST00000379019 DDX17Q92841 729 aaKnown RBP9.27□□□□□ -0.93
GPCPD1-201ENST00000379019 ESPNB1AK53 854 aa9.27□□□□□ -0.93
GPCPD1-201ENST00000379019 ADAMTS2O95450 1211 aa9.27□□□□□ -0.93
GPCPD1-201ENST00000379019 NLRP6P59044 892 aa9.27□□□□□ -0.93
GPCPD1-201ENST00000379019 ARHGEF25Q86VW2 580 aa9.27□□□□□ -0.93
GPCPD1-201ENST00000379019 COG3Q96JB2 828 aa9.27□□□□□ -0.93
GPCPD1-201ENST00000379019 SPATA31A1Q5TZJ5 1347 aa9.27□□□□□ -0.93
GPCPD1-201ENST00000379019 KIAA0232Q92628 1395 aa9.27□□□□□ -0.93
GPCPD1-201ENST00000379019 XPCQ01831 940 aaPredicted RBP9.26□□□□□ -0.93
GPCPD1-201ENST00000379019 NUTM2FA1L443 756 aa9.26□□□□□ -0.93
GPCPD1-201ENST00000379019 PRDM10Q9NQV6 1147 aa9.26□□□□□ -0.93
GPCPD1-201ENST00000379019 FOXD4L5Q5VV16 416 aaPredicted RBP9.25□□□□□ -0.93
GPCPD1-201ENST00000379019 TBC1D9Q6ZT07 1266 aa9.25□□□□□ -0.93
GPCPD1-201ENST00000379019 FOXD4L4Q8WXT5 416 aaPredicted RBP9.25□□□□□ -0.93
GPCPD1-201ENST00000379019 RSPH6AQ9H0K4 717 aa9.25□□□□□ -0.93
GPCPD1-201ENST00000379019 WDR17Q8IZU2 1322 aa9.25□□□□□ -0.93
GPCPD1-201ENST00000379019 AP5Z1O43299 807 aa9.25□□□□□ -0.93
GPCPD1-201ENST00000379019 SMC5Q8IY18 1101 aa9.25□□□□□ -0.93
GPCPD1-201ENST00000379019 CARD10Q9BWT7 1032 aa9.25□□□□□ -0.93
GPCPD1-201ENST00000379019 SMARCA5O60264 1052 aaPredicted RBP9.25□□□□□ -0.93
GPCPD1-201ENST00000379019 LMOD2Q6P5Q4 547 aa9.25□□□□□ -0.93
GPCPD1-201ENST00000379019 ILDR2Q71H61 639 aa9.25□□□□□ -0.93
GPCPD1-201ENST00000379019 EVA1CP58658 441 aa9.24□□□□□ -0.93
GPCPD1-201ENST00000379019 PRIM1P49642 420 aaKnown RBP9.24□□□□□ -0.93
GPCPD1-201ENST00000379019 LTN1O94822 1766 aa9.24□□□□□ -0.93
GPCPD1-201ENST00000379019 GOLGA6L3A6NEY3 463 aa9.24□□□□□ -0.93
GPCPD1-201ENST00000379019 RAB3GAP1Q15042 981 aa9.24□□□□□ -0.93
GPCPD1-201ENST00000379019 ZNF830Q96NB3 372 aaPredicted RBP9.24□□□□□ -0.93
GPCPD1-201ENST00000379019 LARP6Q9BRS8 491 aaKnown RBP9.24□□□□□ -0.93
GPCPD1-201ENST00000379019 FOXD4L6Q3SYB3 417 aaPredicted RBP9.23□□□□□ -0.93
GPCPD1-201ENST00000379019 FOXD4L3Q6VB84 417 aaPredicted RBP9.23□□□□□ -0.93
GPCPD1-201ENST00000379019 BTG4Q9NY30 223 aa9.23□□□□□ -0.93
GPCPD1-201ENST00000379019 TMEM63CQ9P1W3 806 aa9.23□□□□□ -0.93
GPCPD1-201ENST00000379019 OVOS2A0A0G2JMS6 1433 aa9.23□□□□□ -0.93
GPCPD1-201ENST00000379019 ZBTB7BO15156 539 aaPredicted RBP9.23□□□□□ -0.93
GPCPD1-201ENST00000379019 IP6K1Q92551 441 aa9.23□□□□□ -0.93
GPCPD1-201ENST00000379019 ITPRIPQ8IWB1 547 aa9.23□□□□□ -0.93
GPCPD1-201ENST00000379019 NCAPD2Q15021 1401 aa9.23□□□□□ -0.93
GPCPD1-201ENST00000379019 RBM25P49756 843 aaKnown RBP9.22□□□□□ -0.93
GPCPD1-201ENST00000379019 FAM196AQ6ZSG2 479 aa9.22□□□□□ -0.93
GPCPD1-201ENST00000379019 GDPD2Q9HCC8 539 aa9.22□□□□□ -0.93
GPCPD1-201ENST00000379019 TMPOP42166 694 aaKnown RBP9.22□□□□□ -0.93
GPCPD1-201ENST00000379019 ZNF710Q8N1W2 664 aa9.22□□□□□ -0.93
GPCPD1-201ENST00000379019 C8orf58Q8NAV2 365 aa9.22□□□□□ -0.93
GPCPD1-201ENST00000379019 FLT4P35916 1363 aa9.22□□□□□ -0.93
GPCPD1-201ENST00000379019 TNS2Q63HR2 1409 aa9.22□□□□□ -0.93
GPCPD1-201ENST00000379019 CEP350Q5VT06 3117 aa9.22□□□□□ -0.93
GPCPD1-201ENST00000379019 HMOX1P09601 288 aa9.22□□□□□ -0.93
GPCPD1-201ENST00000379019 U2AF1L5P0DN76 240 aaPredicted RBP9.22□□□□□ -0.93
GPCPD1-201ENST00000379019 U2AF1Q01081 240 aaKnown RBP eCLIP9.22□□□□□ -0.932e-8■■■■□ 22.7
GPCPD1-201ENST00000379019 PALD1Q9ULE6 856 aa9.22□□□□□ -0.93
GPCPD1-201ENST00000379019 LRRC37A3O60309 1634 aa9.22□□□□□ -0.93
GPCPD1-201ENST00000379019 FYB1O15117 783 aa9.21□□□□□ -0.93
GPCPD1-201ENST00000379019 NUCB1Q02818 461 aa9.21□□□□□ -0.93
GPCPD1-201ENST00000379019 KRT27Q7Z3Y8 459 aa9.21□□□□□ -0.93
GPCPD1-201ENST00000379019 CYP2E1P05181 493 aaPredicted RBP9.21□□□□□ -0.93
GPCPD1-201ENST00000379019 SF3B2Q13435 895 aaKnown RBP9.21□□□□□ -0.93
GPCPD1-201ENST00000379019 KIAA1211Q6ZU35 1233 aa9.21□□□□□ -0.93
GPCPD1-201ENST00000379019 DZIP1LQ8IYY4 767 aaKnown RBP9.21□□□□□ -0.94
GPCPD1-201ENST00000379019 ZNF428Q96B54 188 aa9.21□□□□□ -0.94
GPCPD1-201ENST00000379019 RUNDC1Q96C34 613 aa9.21□□□□□ -0.94
GPCPD1-201ENST00000379019 PEAK1Q9H792 1746 aa9.21□□□□□ -0.94
GPCPD1-201ENST00000379019 IGSF3O75054 1194 aa9.21□□□□□ -0.94
GPCPD1-201ENST00000379019 LMBRD1Q9NUN5 540 aa9.2□□□□□ -0.94
GPCPD1-201ENST00000379019 ATF7IPQ6VMQ6 1270 aa9.2□□□□□ -0.94
GPCPD1-201ENST00000379019 SEPT12Q8IYM1 358 aa9.2□□□□□ -0.94
GPCPD1-201ENST00000379019 PNNQ9H307 717 aaKnown RBP9.2□□□□□ -0.94
GPCPD1-201ENST00000379019 SMC4Q9NTJ3 1288 aa9.2□□□□□ -0.94
GPCPD1-201ENST00000379019 UPF1Q92900 1129 aaKnown RBP eCLIP9.2□□□□□ -0.94
GPCPD1-201ENST00000379019 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.2□□□□□ -0.94
GPCPD1-201ENST00000379019 CANXP27824 592 aaKnown RBP9.19□□□□□ -0.94
GPCPD1-201ENST00000379019 MAPK8IP3Q9UPT6 1336 aa9.19□□□□□ -0.94
GPCPD1-201ENST00000379019 APBB1O00213 710 aa9.19□□□□□ -0.94
GPCPD1-201ENST00000379019 TPRNQ4KMQ1 711 aa9.19□□□□□ -0.94
GPCPD1-201ENST00000379019 BCL11BQ9C0K0 894 aaPredicted RBP9.19□□□□□ -0.94
GPCPD1-201ENST00000379019 DAXXQ9UER7 740 aaPredicted RBP9.19□□□□□ -0.94
GPCPD1-201ENST00000379019 GADD45BO75293 160 aaPredicted RBP9.19□□□□□ -0.94
GPCPD1-201ENST00000379019 MORC1Q86VD1 984 aa9.19□□□□□ -0.94
GPCPD1-201ENST00000379019 BAG4O95429 457 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms