RNA–Protein interactions for RNA: ENST00000378947.7

C5orf56-202, Transcript of chromosome 5 open reading frame 56, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C5orf56, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C5orf56-202ENST00000378947 DDX10Q13206 875 aaKnown RBP13.45□□□□□ -0.26
C5orf56-202ENST00000378947 AMER1Q5JTC6 1135 aaPredicted RBP13.45□□□□□ -0.26
C5orf56-202ENST00000378947 LINC00116Q8NCU8 138 aa13.45□□□□□ -0.26
C5orf56-202ENST00000378947 NLGN2Q8NFZ4 835 aa13.45□□□□□ -0.26
C5orf56-202ENST00000378947 RBM42Q9BTD8 480 aaKnown RBP13.45□□□□□ -0.26
C5orf56-202ENST00000378947 ATG3Q9NT62 314 aa13.45□□□□□ -0.26
C5orf56-202ENST00000378947 PLEKHG2Q9H7P9 1386 aa13.45□□□□□ -0.26
C5orf56-202ENST00000378947 SMIM5Q71RC9 77 aa13.44□□□□□ -0.26
C5orf56-202ENST00000378947 ITGB4P16144 1822 aa13.43□□□□□ -0.26
C5orf56-202ENST00000378947 TUBGCP6Q96RT7 1819 aa13.43□□□□□ -0.26
C5orf56-202ENST00000378947 SSFA2P28290 1259 aa13.43□□□□□ -0.26
C5orf56-202ENST00000378947 ITPK1Q13572 414 aa13.43□□□□□ -0.26
C5orf56-202ENST00000378947 C4BP0C0L5 1744 aa13.42□□□□□ -0.26
C5orf56-202ENST00000378947 IL13P35225 146 aa13.42□□□□□ -0.26
C5orf56-202ENST00000378947 AMIGO3Q86WK7 504 aa13.42□□□□□ -0.26
C5orf56-202ENST00000378947 HMOX1P09601 288 aa13.41□□□□□ -0.26
C5orf56-202ENST00000378947 RTCBQ9Y3I0 505 aaKnown RBP13.41□□□□□ -0.26
C5orf56-202ENST00000378947 DIAPH1O60610 1272 aaKnown RBP13.4□□□□□ -0.26
C5orf56-202ENST00000378947 PTCD1O75127 700 aaKnown RBP13.4□□□□□ -0.26
C5orf56-202ENST00000378947 TRAPPC3LQ5T215 181 aa13.4□□□□□ -0.26
C5orf56-202ENST00000378947 ZNF784Q8NCA9 323 aaPredicted RBP13.4□□□□□ -0.26
C5orf56-202ENST00000378947 NFATC2IPQ8NCF5 419 aa13.4□□□□□ -0.26
C5orf56-202ENST00000378947 CD2APQ9Y5K6 639 aa13.4□□□□□ -0.26
C5orf56-202ENST00000378947 GRIN3BO60391 1043 aa13.39□□□□□ -0.27
C5orf56-202ENST00000378947 TAF1LQ8IZX4 1826 aa13.39□□□□□ -0.27
C5orf56-202ENST00000378947 KDM6AO15550 1401 aaPredicted RBP13.39□□□□□ -0.27
C5orf56-202ENST00000378947 KDRP35968 1356 aa13.38□□□□□ -0.27
C5orf56-202ENST00000378947 PER1O15534 1290 aaPredicted RBP13.38□□□□□ -0.27
C5orf56-202ENST00000378947 U2SURPO15042 1029 aaKnown RBP13.37□□□□□ -0.27
C5orf56-202ENST00000378947 RFC4P35249 363 aa13.37□□□□□ -0.27
C5orf56-202ENST00000378947 AKAP4Q5JQC9 854 aa13.37□□□□□ -0.27
C5orf56-202ENST00000378947 SLC4A9Q96Q91 983 aa13.37□□□□□ -0.27
C5orf56-202ENST00000378947 WWC3Q9ULE0 1092 aa13.37□□□□□ -0.27
C5orf56-202ENST00000378947 COL24A1Q17RW2 1714 aa13.36□□□□□ -0.27
C5orf56-202ENST00000378947 MMP10P09238 476 aa13.36□□□□□ -0.27
C5orf56-202ENST00000378947 YBX3P16989 372 aaKnown RBP eCLIP13.36□□□□□ -0.27
C5orf56-202ENST00000378947 RC3H1Q5TC82 1133 aaKnown RBP13.35□□□□□ -0.27
C5orf56-202ENST00000378947 NLGN1Q8N2Q7 840 aa13.35□□□□□ -0.27
C5orf56-202ENST00000378947 UBR3Q6ZT12 1888 aa13.34□□□□□ -0.27
C5orf56-202ENST00000378947 ADRA2BP18089 450 aa13.34□□□□□ -0.27
C5orf56-202ENST00000378947 ARHGEF1Q92888 912 aaKnown RBP13.34□□□□□ -0.27
C5orf56-202ENST00000378947 SLC52A2Q9HAB3 445 aa13.34□□□□□ -0.27
C5orf56-202ENST00000378947 LGR6Q9HBX8 967 aa13.34□□□□□ -0.27
C5orf56-202ENST00000378947 CNTNAP4Q9C0A0 1308 aa13.34□□□□□ -0.27
C5orf56-202ENST00000378947 RPS6KA4O75676 772 aa13.33□□□□□ -0.28
C5orf56-202ENST00000378947 MTHFSDQ2M296 383 aaKnown RBP13.33□□□□□ -0.28
C5orf56-202ENST00000378947 CFAP53Q96M91 514 aa13.33□□□□□ -0.28
C5orf56-202ENST00000378947 RNMTO43148 476 aaKnown RBP13.32□□□□□ -0.28
C5orf56-202ENST00000378947 CRKLP46109 303 aaKnown RBP13.32□□□□□ -0.28
C5orf56-202ENST00000378947 PARP3Q9Y6F1 533 aa13.32□□□□□ -0.28
C5orf56-202ENST00000378947 NPC1L1Q9UHC9 1359 aa13.32□□□□□ -0.28
C5orf56-202ENST00000378947 CHD4Q14839 1912 aa13.31□□□□□ -0.28
C5orf56-202ENST00000378947 SLC39A6Q13433 755 aa13.31□□□□□ -0.28
C5orf56-202ENST00000378947 GYS1P13807 737 aa13.3□□□□□ -0.28
C5orf56-202ENST00000378947 DNAJC10Q8IXB1 793 aa13.3□□□□□ -0.28
C5orf56-202ENST00000378947 TTC5Q8N0Z6 440 aa13.3□□□□□ -0.28
C5orf56-202ENST00000378947 CCDC87Q9NVE4 849 aa13.3□□□□□ -0.28
C5orf56-202ENST00000378947 ZPR1O75312 459 aa13.29□□□□□ -0.28
C5orf56-202ENST00000378947 GIGYF1O75420 1035 aaPredicted RBP13.29□□□□□ -0.28
C5orf56-202ENST00000378947 TEFQ10587 303 aa13.29□□□□□ -0.28
C5orf56-202ENST00000378947 GAS2L2Q8NHY3 880 aa13.29□□□□□ -0.28
C5orf56-202ENST00000378947 GNAT3A8MTJ3 354 aa13.28□□□□□ -0.28
C5orf56-202ENST00000378947 SRP68Q9UHB9 627 aaKnown RBP13.28□□□□□ -0.28
C5orf56-202ENST00000378947 NUDCQ9Y266 331 aa13.28□□□□□ -0.28
C5orf56-202ENST00000378947 ZNF831Q5JPB2 1677 aa13.28□□□□□ -0.28
C5orf56-202ENST00000378947 A0A0G2JLW4 131 aa13.27□□□□□ -0.29
C5orf56-202ENST00000378947 TGFB2P61812 414 aa13.27□□□□□ -0.29
C5orf56-202ENST00000378947 DIEXFQ68CQ4 756 aaKnown RBP13.27□□□□□ -0.29
C5orf56-202ENST00000378947 INTS5Q6P9B9 1019 aaKnown RBP13.27□□□□□ -0.29
C5orf56-202ENST00000378947 BCS1LQ9Y276 419 aa13.27□□□□□ -0.29
C5orf56-202ENST00000378947 CICQ96RK0 1608 aaPredicted RBP13.27□□□□□ -0.29
C5orf56-202ENST00000378947 U2AF1L5P0DN76 240 aaPredicted RBP13.26□□□□□ -0.29
C5orf56-202ENST00000378947 COL5A3P25940 1745 aaPredicted RBP13.26□□□□□ -0.29
C5orf56-202ENST00000378947 PRKAR2BP31323 418 aa13.26□□□□□ -0.29
C5orf56-202ENST00000378947 C1QTNF8P60827 252 aa13.26□□□□□ -0.29
C5orf56-202ENST00000378947 U2AF1Q01081 240 aaKnown RBP eCLIP13.26□□□□□ -0.29
C5orf56-202ENST00000378947 FKBP8Q14318 412 aa13.26□□□□□ -0.29
C5orf56-202ENST00000378947 ZNF526Q8TF50 670 aaPredicted RBP13.26□□□□□ -0.29
C5orf56-202ENST00000378947 USP42Q9H9J4 1324 aaKnown RBP13.26□□□□□ -0.29
C5orf56-202ENST00000378947 SCN11AQ9UI33 1791 aa13.26□□□□□ -0.29
C5orf56-202ENST00000378947 COL3A1P02461 1466 aaPredicted RBP13.25□□□□□ -0.29
C5orf56-202ENST00000378947 SENP3-EIF4A1A0A087X0R7 540 aa13.25□□□□□ -0.29
C5orf56-202ENST00000378947 STARD3NLO95772 234 aa13.25□□□□□ -0.29
C5orf56-202ENST00000378947 CYP19A1P11511 503 aaPredicted RBP13.25□□□□□ -0.29
C5orf56-202ENST00000378947 PPP2R1AP30153 589 aa13.25□□□□□ -0.29
C5orf56-202ENST00000378947 ATP10DQ9P241 1426 aa13.24□□□□□ -0.29
C5orf56-202ENST00000378947 ANP32CO43423 234 aa13.24□□□□□ -0.29
C5orf56-202ENST00000378947 FCHSD2O94868 740 aa13.24□□□□□ -0.29
C5orf56-202ENST00000378947 DPEP1P16444 411 aa13.24□□□□□ -0.29
C5orf56-202ENST00000378947 CANXP27824 592 aaKnown RBP13.24□□□□□ -0.29
C5orf56-202ENST00000378947 USPL1Q5W0Q7 1092 aa13.24□□□□□ -0.29
C5orf56-202ENST00000378947 NPM2Q86SE8 214 aaKnown RBP13.24□□□□□ -0.29
C5orf56-202ENST00000378947 VSIG10Q8N0Z9 540 aa13.24□□□□□ -0.29
C5orf56-202ENST00000378947 GPBP1L1Q9HC44 474 aaPredicted RBP13.24□□□□□ -0.29
C5orf56-202ENST00000378947 ZBTB1Q9Y2K1 713 aa13.24□□□□□ -0.29
C5orf56-202ENST00000378947 ZNF330Q9Y3S2 320 aaPredicted RBP13.24□□□□□ -0.29
C5orf56-202ENST00000378947 PXDNLA1KZ92 1463 aa13.23□□□□□ -0.29
C5orf56-202ENST00000378947 MRC1P22897 1456 aa13.23□□□□□ -0.29
C5orf56-202ENST00000378947 C10orf71Q711Q0 1435 aa13.23□□□□□ -0.29
C5orf56-202ENST00000378947 SOS1Q07889 1333 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms