RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 SIRT2Q8IXJ6 389 aa18.54■□□□□ 0.56
RAB3IP-203ENST00000378809 ANP32EQ9BTT0 268 aa18.54■□□□□ 0.56
RAB3IP-203ENST00000378809 RGPD5Q99666 1765 aa18.54■□□□□ 0.56
RAB3IP-203ENST00000378809 CHD1LQ86WJ1 897 aa18.54■□□□□ 0.56
RAB3IP-203ENST00000378809 TATP17735 454 aaPredicted RBP18.53■□□□□ 0.56
RAB3IP-203ENST00000378809 CCT4P50991 539 aaKnown RBP18.53■□□□□ 0.56
RAB3IP-203ENST00000378809 EIF4A1P60842 406 aaKnown RBP18.53■□□□□ 0.56
RAB3IP-203ENST00000378809 MEIS3Q99687 375 aa18.53■□□□□ 0.56
RAB3IP-203ENST00000378809 LMO7Q8WWI1 1683 aa18.52■□□□□ 0.56
RAB3IP-203ENST00000378809 CAMTA1Q9Y6Y1 1673 aa18.52■□□□□ 0.56
RAB3IP-203ENST00000378809 KCNQ3O43525 872 aa18.52■□□□□ 0.56
RAB3IP-203ENST00000378809 DDRGK1Q96HY6 314 aa18.51■□□□□ 0.55
RAB3IP-203ENST00000378809 FAM208AQ9UK61 1670 aaKnown RBP18.5■□□□□ 0.55
RAB3IP-203ENST00000378809 BCL11AQ9H165 835 aa18.5■□□□□ 0.55
RAB3IP-203ENST00000378809 PRDM11Q9NQV5 511 aa18.5■□□□□ 0.55
RAB3IP-203ENST00000378809 SPG7Q9UQ90 795 aa18.5■□□□□ 0.55
RAB3IP-203ENST00000378809 SEC24BO95487 1268 aa18.49■□□□□ 0.55
RAB3IP-203ENST00000378809 CPDO75976 1380 aa18.49■□□□□ 0.55
RAB3IP-203ENST00000378809 SOS2Q07890 1332 aaPredicted RBP18.49■□□□□ 0.55
RAB3IP-203ENST00000378809 HOXB7P09629 217 aa18.48■□□□□ 0.55
RAB3IP-203ENST00000378809 CEP85Q6P2H3 762 aa18.48■□□□□ 0.55
RAB3IP-203ENST00000378809 RPAP2Q8IXW5 612 aaPredicted RBP18.48■□□□□ 0.55
RAB3IP-203ENST00000378809 ANKRD44Q8N8A2 993 aa18.48■□□□□ 0.55
RAB3IP-203ENST00000378809 CHMP4AQ9BY43 222 aa18.48■□□□□ 0.55
RAB3IP-203ENST00000378809 PHAXQ9H814 394 aaKnown RBP18.48■□□□□ 0.55
RAB3IP-203ENST00000378809 OVOS2A0A0G2JMS6 1433 aa18.48■□□□□ 0.55
RAB3IP-203ENST00000378809 UPF2Q9HAU5 1272 aaKnown RBP18.47■□□□□ 0.55
RAB3IP-203ENST00000378809 CHPF2Q9P2E5 772 aa18.47■□□□□ 0.55
RAB3IP-203ENST00000378809 ATP10DQ9P241 1426 aa18.47■□□□□ 0.55
RAB3IP-203ENST00000378809 MEGF6O75095 1541 aa18.47■□□□□ 0.55
RAB3IP-203ENST00000378809 COL18A1P39060 1754 aa18.46■□□□□ 0.55
RAB3IP-203ENST00000378809 PHKG2P15735 406 aa18.45■□□□□ 0.54
RAB3IP-203ENST00000378809 VIRMAQ69YN4 1812 aaKnown RBP18.45■□□□□ 0.54
RAB3IP-203ENST00000378809 DCTPP1Q9H773 170 aa18.45■□□□□ 0.54
RAB3IP-203ENST00000378809 KDM3BQ7LBC6 1761 aa18.45■□□□□ 0.54
RAB3IP-203ENST00000378809 ABCC6O95255 1503 aa18.45■□□□□ 0.54
RAB3IP-203ENST00000378809 CRYBG1Q9Y4K1 1723 aa18.44■□□□□ 0.54
RAB3IP-203ENST00000378809 GNAI2P04899 355 aa18.44■□□□□ 0.54
RAB3IP-203ENST00000378809 IFNL2Q8IZJ0 200 aa18.44■□□□□ 0.54
RAB3IP-203ENST00000378809 DAXXQ9UER7 740 aaPredicted RBP18.44■□□□□ 0.54
RAB3IP-203ENST00000378809 TOM1L2Q6ZVM7 507 aa18.44■□□□□ 0.54
RAB3IP-203ENST00000378809 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.44■□□□□ 0.541e-6■■□□□ 13.1
RAB3IP-203ENST00000378809 APBB1O00213 710 aa18.43■□□□□ 0.54
RAB3IP-203ENST00000378809 HMMRO75330 724 aa18.43■□□□□ 0.54
RAB3IP-203ENST00000378809 ANXA1P04083 346 aa18.43■□□□□ 0.54
RAB3IP-203ENST00000378809 GNAI3P08754 354 aa18.42■□□□□ 0.54
RAB3IP-203ENST00000378809 GIGYF1O75420 1035 aaPredicted RBP18.42■□□□□ 0.54
RAB3IP-203ENST00000378809 SLC52A2Q9HAB3 445 aa18.42■□□□□ 0.54
RAB3IP-203ENST00000378809 KDM6AO15550 1401 aaPredicted RBP18.41■□□□□ 0.54
RAB3IP-203ENST00000378809 SLC39A6Q13433 755 aa18.41■□□□□ 0.54
RAB3IP-203ENST00000378809 NFATC2IPQ8NCF5 419 aa18.41■□□□□ 0.54
RAB3IP-203ENST00000378809 DBF4Q9UBU7 674 aaPredicted RBP18.41■□□□□ 0.54
RAB3IP-203ENST00000378809 WDR17Q8IZU2 1322 aa18.41■□□□□ 0.54
RAB3IP-203ENST00000378809 PRAMEF22A3QJZ6 481 aa18.4■□□□□ 0.54
RAB3IP-203ENST00000378809 CYP27B1O15528 508 aa18.4■□□□□ 0.54
RAB3IP-203ENST00000378809 ZNF790Q6PG37 636 aa18.4■□□□□ 0.54
RAB3IP-203ENST00000378809 STRN4Q9NRL3 753 aa18.4■□□□□ 0.54
RAB3IP-203ENST00000378809 PXDNLA1KZ92 1463 aa18.4■□□□□ 0.54
RAB3IP-203ENST00000378809 PI4KAP2A4QPH2 592 aa18.39■□□□□ 0.53
RAB3IP-203ENST00000378809 SLC4A3P48751 1232 aa18.39■□□□□ 0.53
RAB3IP-203ENST00000378809 MFAP1P55081 439 aaKnown RBP18.39■□□□□ 0.53
RAB3IP-203ENST00000378809 PI4KAP1Q8N8J0 262 aa18.39■□□□□ 0.53
RAB3IP-203ENST00000378809 DCAF5Q96JK2 942 aa18.39■□□□□ 0.53
RAB3IP-203ENST00000378809 SRCIN1Q9C0H9 1055 aa18.39■□□□□ 0.53
RAB3IP-203ENST00000378809 UBTFL1P0CB47 393 aaPredicted RBP18.39■□□□□ 0.53
RAB3IP-203ENST00000378809 BMP2KLQ5H9B9 411 aa18.39■□□□□ 0.53
RAB3IP-203ENST00000378809 HSP90AB1P08238 724 aaKnown RBP18.38■□□□□ 0.53
RAB3IP-203ENST00000378809 DNAAF4Q8WXU2 420 aa18.38■□□□□ 0.53
RAB3IP-203ENST00000378809 EVA1CP58658 441 aa18.37■□□□□ 0.53
RAB3IP-203ENST00000378809 LRRFIP2Q9Y608 721 aaKnown RBP18.37■□□□□ 0.53
RAB3IP-203ENST00000378809 SMARCA5O60264 1052 aaPredicted RBP18.37■□□□□ 0.53
RAB3IP-203ENST00000378809 PROSER3Q2NL68 480 aa18.37■□□□□ 0.53
RAB3IP-203ENST00000378809 TTC5Q8N0Z6 440 aa18.37■□□□□ 0.53
RAB3IP-203ENST00000378809 USP44Q9H0E7 712 aa18.37■□□□□ 0.53
RAB3IP-203ENST00000378809 CACNA1FO60840 1977 aa18.36■□□□□ 0.53
RAB3IP-203ENST00000378809 COL5A2P05997 1499 aaPredicted RBP18.36■□□□□ 0.53
RAB3IP-203ENST00000378809 HEG1Q9ULI3 1381 aa18.36■□□□□ 0.53
RAB3IP-203ENST00000378809 ADAMTS7Q9UKP4 1686 aa18.36■□□□□ 0.53
RAB3IP-203ENST00000378809 C16orf71Q8IYS4 520 aaPredicted RBP18.36■□□□□ 0.53
RAB3IP-203ENST00000378809 PLEKHG2Q9H7P9 1386 aa18.36■□□□□ 0.53
RAB3IP-203ENST00000378809 CABP4P57796 275 aa18.35■□□□□ 0.53
RAB3IP-203ENST00000378809 TBC1D32Q96NH3 1257 aa18.35■□□□□ 0.53
RAB3IP-203ENST00000378809 PLEKHM2Q8IWE5 1019 aa18.35■□□□□ 0.53
RAB3IP-203ENST00000378809 SIPA1L3O60292 1781 aaPredicted RBP18.34■□□□□ 0.53
RAB3IP-203ENST00000378809 PNMA6EA0A0J9YXQ4 647 aa18.34■□□□□ 0.53
RAB3IP-203ENST00000378809 ZCRB1Q8TBF4 217 aaKnown RBP18.34■□□□□ 0.53
RAB3IP-203ENST00000378809 HYPKQ9NX55 129 aa18.34■□□□□ 0.53
RAB3IP-203ENST00000378809 EXOC6BQ9Y2D4 811 aa18.34■□□□□ 0.53
RAB3IP-203ENST00000378809 BEND3Q5T5X7 828 aa18.33■□□□□ 0.53
RAB3IP-203ENST00000378809 MAP3K2Q9Y2U5 619 aa18.33■□□□□ 0.53
RAB3IP-203ENST00000378809 PCDH11XQ9BZA7 1347 aa18.33■□□□□ 0.53
RAB3IP-203ENST00000378809 PCDH11YQ9BZA8 1340 aa18.33■□□□□ 0.53
RAB3IP-203ENST00000378809 ADCY9O60503 1353 aa18.33■□□□□ 0.53
RAB3IP-203ENST00000378809 ATP8B2P98198 1209 aa18.33■□□□□ 0.52
RAB3IP-203ENST00000378809 AIMP1Q12904 312 aaKnown RBP18.33■□□□□ 0.52
RAB3IP-203ENST00000378809 LARP1Q6PKG0 1096 aaKnown RBP18.33■□□□□ 0.52
RAB3IP-203ENST00000378809 ZNF496Q96IT1 587 aaPredicted RBP18.33■□□□□ 0.52
RAB3IP-203ENST00000378809 USP35Q9P2H5 1018 aa18.33■□□□□ 0.52
RAB3IP-203ENST00000378809 SCN11AQ9UI33 1791 aa18.33■□□□□ 0.52
RAB3IP-203ENST00000378809 NHSL1Q5SYE7 1610 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms