RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 EIF2AK4Q9P2K8 1649 aaKnown RBP17.81■□□□□ 0.44
NPHP4-201ENST00000378156 HSP90B2PQ58FF3 399 aa17.81■□□□□ 0.44
NPHP4-201ENST00000378156 DNAAF4Q8WXU2 420 aa17.81■□□□□ 0.44
NPHP4-201ENST00000378156 RAB11FIP3O75154 756 aa17.81■□□□□ 0.44
NPHP4-201ENST00000378156 NUCB1Q02818 461 aa17.81■□□□□ 0.44
NPHP4-201ENST00000378156 GLRX3O76003 335 aaKnown RBP17.81■□□□□ 0.44
NPHP4-201ENST00000378156 JAKMIP1Q96N16 626 aaKnown RBP17.81■□□□□ 0.44
NPHP4-201ENST00000378156 LETM1O95202 739 aaPredicted RBP17.8■□□□□ 0.44
NPHP4-201ENST00000378156 CEBPZQ03701 1054 aaKnown RBP17.8■□□□□ 0.44
NPHP4-201ENST00000378156 SEC24BO95487 1268 aa17.8■□□□□ 0.44
NPHP4-201ENST00000378156 FLIIQ13045 1269 aa17.8■□□□□ 0.44
NPHP4-201ENST00000378156 CWC15Q9P013 229 aaKnown RBP17.8■□□□□ 0.44
NPHP4-201ENST00000378156 ABCC10Q5T3U5 1492 aa17.8■□□□□ 0.44
NPHP4-201ENST00000378156 CDR1P51861 262 aa17.8■□□□□ 0.44
NPHP4-201ENST00000378156 PHF23Q9BUL5 403 aaPredicted RBP17.8■□□□□ 0.44
NPHP4-201ENST00000378156 DMRT2Q9Y5R5 561 aa17.8■□□□□ 0.44
NPHP4-201ENST00000378156 KINO60870 393 aaKnown RBP17.79■□□□□ 0.44
NPHP4-201ENST00000378156 HSP90AB2PQ58FF8 381 aa17.79■□□□□ 0.44
NPHP4-201ENST00000378156 MYD88Q99836 296 aa17.79■□□□□ 0.44
NPHP4-201ENST00000378156 LRRFIP2Q9Y608 721 aaKnown RBP17.79■□□□□ 0.44
NPHP4-201ENST00000378156 TRIM5Q9C035 493 aa17.79■□□□□ 0.44
NPHP4-201ENST00000378156 EIF4G3O43432 1585 aaKnown RBP17.79■□□□□ 0.44
NPHP4-201ENST00000378156 PKNOX2Q96KN3 472 aa17.79■□□□□ 0.44
NPHP4-201ENST00000378156 NAT10Q9H0A0 1025 aaKnown RBP17.79■□□□□ 0.44
NPHP4-201ENST00000378156 HYPKQ9NX55 129 aa17.79■□□□□ 0.44
NPHP4-201ENST00000378156 CTNNA3Q9UI47 895 aa17.79■□□□□ 0.44
NPHP4-201ENST00000378156 PTPRCP08575 1304 aa17.79■□□□□ 0.44
NPHP4-201ENST00000378156 IKQ13123 557 aaPredicted RBP17.78■□□□□ 0.44
NPHP4-201ENST00000378156 LARP1BQ659C4 914 aaKnown RBP17.78■□□□□ 0.44
NPHP4-201ENST00000378156 PDE4CQ08493 712 aa17.78■□□□□ 0.44
NPHP4-201ENST00000378156 AK7Q96M32 723 aa17.78■□□□□ 0.44
NPHP4-201ENST00000378156 PDRG1Q9NUG6 133 aa17.78■□□□□ 0.44
NPHP4-201ENST00000378156 KDM6BO15054 1643 aa17.78■□□□□ 0.44
NPHP4-201ENST00000378156 AEBP1Q8IUX7 1158 aa17.78■□□□□ 0.44
NPHP4-201ENST00000378156 CCDC43Q96MW1 224 aaKnown RBP17.78■□□□□ 0.44
NPHP4-201ENST00000378156 ZNF396Q96N95 335 aaPredicted RBP17.78■□□□□ 0.44
NPHP4-201ENST00000378156 BCL11BQ9C0K0 894 aaPredicted RBP17.78■□□□□ 0.44
NPHP4-201ENST00000378156 TTC21AQ8NDW8 1320 aa17.77■□□□□ 0.44
NPHP4-201ENST00000378156 SYCE3A1L190 88 aa17.77■□□□□ 0.44
NPHP4-201ENST00000378156 IGHMBP2P38935 993 aaKnown RBP17.77■□□□□ 0.44
NPHP4-201ENST00000378156 FMNL2Q96PY5 1086 aa17.77■□□□□ 0.44
NPHP4-201ENST00000378156 KRT32Q14532 448 aa17.77■□□□□ 0.44
NPHP4-201ENST00000378156 TSHZ3Q63HK5 1081 aa17.77■□□□□ 0.44
NPHP4-201ENST00000378156 ZRANB1Q9UGI0 708 aa17.77■□□□□ 0.44
NPHP4-201ENST00000378156 ADAMTS2O95450 1211 aa17.77■□□□□ 0.43
NPHP4-201ENST00000378156 STK38Q15208 465 aa17.77■□□□□ 0.43
NPHP4-201ENST00000378156 BICDL1Q6ZP65 573 aa17.77■□□□□ 0.43
NPHP4-201ENST00000378156 C8orf58Q8NAV2 365 aa17.77■□□□□ 0.43
NPHP4-201ENST00000378156 POLKQ9UBT6 870 aa17.77■□□□□ 0.43
NPHP4-201ENST00000378156 IFNL2Q8IZJ0 200 aa17.77■□□□□ 0.43
NPHP4-201ENST00000378156 PUS7Q96PZ0 661 aaKnown RBP17.77■□□□□ 0.43
NPHP4-201ENST00000378156 RIMS2Q9UQ26 1411 aa17.76■□□□□ 0.43
NPHP4-201ENST00000378156 OLFM4Q6UX06 510 aa17.76■□□□□ 0.43
NPHP4-201ENST00000378156 SPC24Q8NBT2 197 aa17.76■□□□□ 0.43
NPHP4-201ENST00000378156 ARHGAP45Q92619 1136 aa17.76■□□□□ 0.43
NPHP4-201ENST00000378156 CASTP20810 708 aaKnown RBP17.76■□□□□ 0.43
NPHP4-201ENST00000378156 METTL24Q5JXM2 366 aa17.76■□□□□ 0.43
NPHP4-201ENST00000378156 TRIM22Q8IYM9 498 aa17.76■□□□□ 0.43
NPHP4-201ENST00000378156 RUFY1Q96T51 708 aa17.75■□□□□ 0.43
NPHP4-201ENST00000378156 GCC2Q8IWJ2 1684 aa17.75■□□□□ 0.43
NPHP4-201ENST00000378156 IDH1O75874 414 aaKnown RBP17.75■□□□□ 0.43
NPHP4-201ENST00000378156 ANKRD24Q8TF21 1146 aa17.75■□□□□ 0.43
NPHP4-201ENST00000378156 ZSCAN31Q96LW9 406 aaPredicted RBP17.75■□□□□ 0.43
NPHP4-201ENST00000378156 KRT85P78386 507 aa17.75■□□□□ 0.43
NPHP4-201ENST00000378156 TSPYL6Q8N831 410 aa17.75■□□□□ 0.43
NPHP4-201ENST00000378156 TTC22Q5TAA0 569 aa17.74■□□□□ 0.43
NPHP4-201ENST00000378156 MEIS3Q99687 375 aa17.74■□□□□ 0.43
NPHP4-201ENST00000378156 AKAP2Q9Y2D5 859 aa17.74■□□□□ 0.43
NPHP4-201ENST00000378156 STK11IPQ8N1F8 1099 aa17.74■□□□□ 0.43
NPHP4-201ENST00000378156 MRPL50Q8N5N7 158 aaKnown RBP17.74■□□□□ 0.43
NPHP4-201ENST00000378156 LRP2BPQ9P2M1 347 aa17.74■□□□□ 0.43
NPHP4-201ENST00000378156 ZNF652Q9Y2D9 606 aa17.74■□□□□ 0.43
NPHP4-201ENST00000378156 SF3B2Q13435 895 aaKnown RBP17.74■□□□□ 0.43
NPHP4-201ENST00000378156 EXOC5O00471 708 aa17.73■□□□□ 0.43
NPHP4-201ENST00000378156 JMYQ8N9B5 988 aa17.73■□□□□ 0.43
NPHP4-201ENST00000378156 PBRM1Q86U86 1689 aa17.73■□□□□ 0.43
NPHP4-201ENST00000378156 CALRP27797 417 aaKnown RBP17.73■□□□□ 0.43
NPHP4-201ENST00000378156 ERCC4Q92889 916 aaPredicted RBP17.73■□□□□ 0.43
NPHP4-201ENST00000378156 BOLA2Q9H3K6 86 aa17.73■□□□□ 0.43
NPHP4-201ENST00000378156 RAI14Q9P0K7 980 aa17.73■□□□□ 0.43
NPHP4-201ENST00000378156 KDM2BQ8NHM5 1336 aa17.73■□□□□ 0.43
NPHP4-201ENST00000378156 A0A087WZG4 1122 aa17.73■□□□□ 0.43
NPHP4-201ENST00000378156 CCDC192P0DO97 292 aa17.73■□□□□ 0.43
NPHP4-201ENST00000378156 TDO2P48775 406 aa17.73■□□□□ 0.43
NPHP4-201ENST00000378156 PHACTR3Q96KR7 559 aa17.73■□□□□ 0.43
NPHP4-201ENST00000378156 RBM10P98175 930 aaKnown RBP17.72■□□□□ 0.43
NPHP4-201ENST00000378156 CHRNA2Q15822 529 aa17.72■□□□□ 0.43
NPHP4-201ENST00000378156 PRPF40BQ6NWY9 871 aaKnown RBP17.72■□□□□ 0.43
NPHP4-201ENST00000378156 PPIP5K1Q6PFW1 1433 aa17.72■□□□□ 0.43
NPHP4-201ENST00000378156 CCDC69A6NI79 296 aa17.72■□□□□ 0.43
NPHP4-201ENST00000378156 A0A1W2PP64 1363 aa17.72■□□□□ 0.43
NPHP4-201ENST00000378156 FERMT3Q86UX7 667 aa17.72■□□□□ 0.43
NPHP4-201ENST00000378156 CCDC83Q8IWF9 413 aa17.72■□□□□ 0.43
NPHP4-201ENST00000378156 ABCC2Q92887 1545 aa17.71■□□□□ 0.43
NPHP4-201ENST00000378156 HSP90AB3PQ58FF7 597 aa17.71■□□□□ 0.43
NPHP4-201ENST00000378156 ZBTB40Q9NUA8 1239 aa17.71■□□□□ 0.43
NPHP4-201ENST00000378156 ABCF2Q9UG63 623 aa17.71■□□□□ 0.43
NPHP4-201ENST00000378156 ZMYM4Q5VZL5 1548 aa17.71■□□□□ 0.43
NPHP4-201ENST00000378156 NPC1L1Q9UHC9 1359 aa17.71■□□□□ 0.43
NPHP4-201ENST00000378156 VAMP4O75379 141 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms