RNA–Protein interactions for RNA: ENST00000376893.7

SSX3-202, Transcript of SSX family member 3, humanhuman

TSL 2 BASIC

Gene SSX3, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-202ENST00000376893 ZNF518AQ6AHZ1 1483 aa8.61□□□□□ -1.03
SSX3-202ENST00000376893 H3BRB1 525 aa8.6□□□□□ -1.03
SSX3-202ENST00000376893 PPM1GO15355 546 aaPredicted RBP8.6□□□□□ -1.03
SSX3-202ENST00000376893 DKK1O94907 266 aa8.6□□□□□ -1.03
SSX3-202ENST00000376893 CFHP08603 1231 aa8.6□□□□□ -1.03
SSX3-202ENST00000376893 ITGAEP38570 1179 aa8.6□□□□□ -1.03
SSX3-202ENST00000376893 TRAF7Q6Q0C0 670 aa8.6□□□□□ -1.03
SSX3-202ENST00000376893 RGL4Q8IZJ4 473 aa8.6□□□□□ -1.03
SSX3-202ENST00000376893 TUT1Q9H6E5 874 aaKnown RBP8.6□□□□□ -1.03
SSX3-202ENST00000376893 PHLDB1Q86UU1 1377 aa8.6□□□□□ -1.03
SSX3-202ENST00000376893 SCAMP3O14828 347 aaKnown RBP8.59□□□□□ -1.03
SSX3-202ENST00000376893 MAPK1P28482 360 aa8.59□□□□□ -1.03
SSX3-202ENST00000376893 CLDN10P78369 228 aa8.59□□□□□ -1.03
SSX3-202ENST00000376893 MRPL58Q14197 206 aaKnown RBP8.59□□□□□ -1.03
SSX3-202ENST00000376893 PROX2Q3B8N5 592 aa8.59□□□□□ -1.03
SSX3-202ENST00000376893 KIAA1468Q9P260 1216 aa8.59□□□□□ -1.03
SSX3-202ENST00000376893 NOD1Q9Y239 953 aa8.59□□□□□ -1.03
SSX3-202ENST00000376893 SALL2Q9Y467 1007 aaPredicted RBP8.59□□□□□ -1.03
SSX3-202ENST00000376893 MADDQ8WXG6 1647 aa8.58□□□□□ -1.04
SSX3-202ENST00000376893 SEC13P55735 322 aa8.58□□□□□ -1.04
SSX3-202ENST00000376893 FGD1P98174 961 aa8.58□□□□□ -1.04
SSX3-202ENST00000376893 PTK2Q05397 1052 aa8.58□□□□□ -1.04
SSX3-202ENST00000376893 ECM1Q16610 540 aa8.58□□□□□ -1.04
SSX3-202ENST00000376893 KMT5BQ4FZB7 885 aa8.58□□□□□ -1.04
SSX3-202ENST00000376893 EAPPQ56P03 285 aaPredicted RBP8.58□□□□□ -1.04
SSX3-202ENST00000376893 MORN1Q5T089 497 aa8.58□□□□□ -1.04
SSX3-202ENST00000376893 PDXDC2PQ6P474 469 aa8.58□□□□□ -1.04
SSX3-202ENST00000376893 ARMC2Q8NEN0 867 aa8.58□□□□□ -1.04
SSX3-202ENST00000376893 ATP7AQ04656 1500 aa8.58□□□□□ -1.04
SSX3-202ENST00000376893 ZNF644Q9H582 1327 aaPredicted RBP8.57□□□□□ -1.04
SSX3-202ENST00000376893 MYOM3Q5VTT5 1437 aa8.57□□□□□ -1.04
SSX3-202ENST00000376893 ABL1P00519 1130 aa8.57□□□□□ -1.04
SSX3-202ENST00000376893 ERCC5P28715 1186 aaPredicted RBP8.57□□□□□ -1.04
SSX3-202ENST00000376893 PTPRNQ16849 979 aa8.57□□□□□ -1.04
SSX3-202ENST00000376893 EFCAB2Q5VUJ9 269 aa8.57□□□□□ -1.04
SSX3-202ENST00000376893 RABGEF1Q9UJ41 708 aa8.57□□□□□ -1.04
SSX3-202ENST00000376893 KIDINS220Q9ULH0 1771 aa8.57□□□□□ -1.04
SSX3-202ENST00000376893 BCORL1Q5H9F3 1711 aa8.57□□□□□ -1.04
SSX3-202ENST00000376893 C9orf84Q5VXU9 1444 aa8.56□□□□□ -1.04
SSX3-202ENST00000376893 ARHGAP4P98171 946 aa8.56□□□□□ -1.04
SSX3-202ENST00000376893 FKBP4Q02790 459 aaKnown RBP eCLIP8.56□□□□□ -1.04
SSX3-202ENST00000376893 TSNAXIP1Q2TAA8 658 aa8.56□□□□□ -1.04
SSX3-202ENST00000376893 ANKRD13AQ8IZ07 590 aa8.56□□□□□ -1.04
SSX3-202ENST00000376893 ZBED2Q9BTP6 218 aa8.56□□□□□ -1.04
SSX3-202ENST00000376893 SLC4A5Q9BY07 1137 aa8.56□□□□□ -1.04
SSX3-202ENST00000376893 CCDC141Q6ZP82 1450 aa8.56□□□□□ -1.04
SSX3-202ENST00000376893 PLEKHH2Q8IVE3 1493 aa8.56□□□□□ -1.04
SSX3-202ENST00000376893 MBD5Q9P267 1494 aa8.56□□□□□ -1.04
SSX3-202ENST00000376893 CROCC2H7BZ55 1655 aa8.56□□□□□ -1.04
SSX3-202ENST00000376893 PTPN23Q9H3S7 1636 aa8.55□□□□□ -1.04
SSX3-202ENST00000376893 ZNF211Q13398 564 aaPredicted RBP8.55□□□□□ -1.04
SSX3-202ENST00000376893 COL26A1Q96A83 441 aa8.55□□□□□ -1.04
SSX3-202ENST00000376893 ZNF594Q96JF6 807 aaPredicted RBP8.55□□□□□ -1.04
SSX3-202ENST00000376893 CFDP1Q9UEE9 299 aaPredicted RBP8.55□□□□□ -1.04
SSX3-202ENST00000376893 RBM19Q9Y4C8 960 aaKnown RBP8.55□□□□□ -1.04
SSX3-202ENST00000376893 MAGI2Q86UL8 1455 aa8.55□□□□□ -1.04
SSX3-202ENST00000376893 PLXNC1O60486 1568 aa8.55□□□□□ -1.04
SSX3-202ENST00000376893 ADAMTSL3P82987 1691 aa8.55□□□□□ -1.04
SSX3-202ENST00000376893 ADGBQ8N7X0 1667 aa8.55□□□□□ -1.04
SSX3-202ENST00000376893 KIAA1107Q9UPP5 1409 aa8.54□□□□□ -1.04
SSX3-202ENST00000376893 RIMS1Q86UR5 1692 aaKnown RBP8.54□□□□□ -1.04
SSX3-202ENST00000376893 ARHGEF5Q12774 1597 aa8.54□□□□□ -1.04
SSX3-202ENST00000376893 REREQ9P2R6 1566 aa8.54□□□□□ -1.04
SSX3-202ENST00000376893 MLH3Q9UHC1 1453 aa8.54□□□□□ -1.04
SSX3-202ENST00000376893 ZBTB7BO15156 539 aaPredicted RBP8.54□□□□□ -1.04
SSX3-202ENST00000376893 PTCD1O75127 700 aaKnown RBP8.54□□□□□ -1.04
SSX3-202ENST00000376893 SCNN1AP37088 669 aa8.54□□□□□ -1.04
SSX3-202ENST00000376893 TAGLNQ01995 201 aaKnown RBP8.54□□□□□ -1.04
SSX3-202ENST00000376893 KCNH2Q12809 1159 aa8.54□□□□□ -1.04
SSX3-202ENST00000376893 FAM98CQ17RN3 349 aaKnown RBP8.54□□□□□ -1.04
SSX3-202ENST00000376893 AFAP1Q8N556 730 aa8.54□□□□□ -1.04
SSX3-202ENST00000376893 USB1Q9BQ65 265 aaKnown RBP8.54□□□□□ -1.04
SSX3-202ENST00000376893 BACH2Q9BYV9 841 aa8.54□□□□□ -1.04
SSX3-202ENST00000376893 FGD6Q6ZV73 1430 aa8.54□□□□□ -1.04
SSX3-202ENST00000376893 ACTN4O43707 911 aaKnown RBP8.53□□□□□ -1.04
SSX3-202ENST00000376893 PRMT3O60678 531 aa8.53□□□□□ -1.04
SSX3-202ENST00000376893 NOP9Q86U38 636 aaKnown RBP8.53□□□□□ -1.04
SSX3-202ENST00000376893 GTF3C2Q8WUA4 911 aaPredicted RBP8.53□□□□□ -1.04
SSX3-202ENST00000376893 PIK3R5Q8WYR1 880 aa8.53□□□□□ -1.04
SSX3-202ENST00000376893 ARMC5Q96C12 935 aa8.53□□□□□ -1.04
SSX3-202ENST00000376893 RBCK1Q9BYM8 510 aa8.53□□□□□ -1.04
SSX3-202ENST00000376893 CUEDC1Q9NWM3 386 aaPredicted RBP8.53□□□□□ -1.04
SSX3-202ENST00000376893 SLC27A5Q9Y2P5 690 aa8.53□□□□□ -1.04
SSX3-202ENST00000376893 PCDHB9Q9Y5E1 797 aa8.53□□□□□ -1.04
SSX3-202ENST00000376893 M0R2N6 131 aa8.52□□□□□ -1.05
SSX3-202ENST00000376893 NPR3P17342 541 aa8.52□□□□□ -1.05
SSX3-202ENST00000376893 HDLBPQ00341 1268 aaKnown RBP8.52□□□□□ -1.05
SSX3-202ENST00000376893 NBPF14Q5TI25 921 aa8.52□□□□□ -1.05
SSX3-202ENST00000376893 SLC43A3Q8NBI5 491 aa8.52□□□□□ -1.05
SSX3-202ENST00000376893 CHMP4AQ9BY43 222 aa8.52□□□□□ -1.05
SSX3-202ENST00000376893 FER1L4A9Z1Z3 1794 aa8.52□□□□□ -1.05
SSX3-202ENST00000376893 ATP10AO60312 1499 aa8.51□□□□□ -1.05
SSX3-202ENST00000376893 TCOF1Q13428 1488 aaKnown RBP8.51□□□□□ -1.05
SSX3-202ENST00000376893 DNMT1P26358 1616 aaKnown RBP8.51□□□□□ -1.05
SSX3-202ENST00000376893 HNRNPMP52272 730 aaKnown RBP eCLIP8.51□□□□□ -1.05
SSX3-202ENST00000376893 LAPTM4BQ86VI4 370 aa8.51□□□□□ -1.05
SSX3-202ENST00000376893 PPARGC1BQ86YN6 1023 aaKnown RBP8.51□□□□□ -1.05
SSX3-202ENST00000376893 KCNK17Q96T54 332 aa8.51□□□□□ -1.05
SSX3-202ENST00000376893 OCSTAMPQ9BR26 566 aa8.51□□□□□ -1.05
SSX3-202ENST00000376893 PRR14Q9BWN1 585 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms