RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 VPS36Q86VN1 386 aa10.29□□□□□ -0.76
SHROOM4-202ENST00000376020 DYDC1Q8WWB3 177 aa10.29□□□□□ -0.76
SHROOM4-202ENST00000376020 SAFB2Q14151 953 aaKnown RBP eCLIP10.29□□□□□ -0.76
SHROOM4-202ENST00000376020 NFXL1Q6ZNB6 911 aa10.29□□□□□ -0.76
SHROOM4-202ENST00000376020 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.29□□□□□ -0.76
SHROOM4-202ENST00000376020 REREQ9P2R6 1566 aa10.29□□□□□ -0.76
SHROOM4-202ENST00000376020 ABCC5O15440 1437 aa10.29□□□□□ -0.76
SHROOM4-202ENST00000376020 FMNL3Q8IVF7 1028 aa10.29□□□□□ -0.76
SHROOM4-202ENST00000376020 CTAGE1Q96RT6 745 aa10.29□□□□□ -0.76
SHROOM4-202ENST00000376020 NACAP1Q9BZK3 213 aa10.29□□□□□ -0.76
SHROOM4-202ENST00000376020 CLIP2Q9UDT6 1046 aa10.28□□□□□ -0.76
SHROOM4-202ENST00000376020 ZBTB7CA1YPR0 619 aa10.28□□□□□ -0.76
SHROOM4-202ENST00000376020 NSD3Q9BZ95 1437 aa10.28□□□□□ -0.76
SHROOM4-202ENST00000376020 CKAP4Q07065 602 aaKnown RBP10.28□□□□□ -0.76
SHROOM4-202ENST00000376020 CTCFLQ8NI51 663 aaPredicted RBP10.28□□□□□ -0.76
SHROOM4-202ENST00000376020 MX1P20591 662 aa10.28□□□□□ -0.76
SHROOM4-202ENST00000376020 KIAA1328Q86T90 577 aa10.28□□□□□ -0.76
SHROOM4-202ENST00000376020 PDILTQ8N807 584 aa10.28□□□□□ -0.76
SHROOM4-202ENST00000376020 PIP4K2BP78356 416 aa10.28□□□□□ -0.76
SHROOM4-202ENST00000376020 COL17A1Q9UMD9 1497 aaPredicted RBP10.28□□□□□ -0.76
SHROOM4-202ENST00000376020 NFE2L2Q16236 605 aa10.27□□□□□ -0.76
SHROOM4-202ENST00000376020 TNNT1P13805 278 aa10.27□□□□□ -0.77
SHROOM4-202ENST00000376020 ZNF445P59923 1031 aa10.27□□□□□ -0.77
SHROOM4-202ENST00000376020 NBPF8Q3BBV2 869 aa10.27□□□□□ -0.77
SHROOM4-202ENST00000376020 CT47A1Q5JQC4 288 aaPredicted RBP10.27□□□□□ -0.77
SHROOM4-202ENST00000376020 PPP4R3BQ5MIZ7 849 aa10.27□□□□□ -0.77
SHROOM4-202ENST00000376020 SPECC1LQ69YQ0 1117 aa10.27□□□□□ -0.77
SHROOM4-202ENST00000376020 PDRG1Q9NUG6 133 aa10.27□□□□□ -0.77
SHROOM4-202ENST00000376020 ABCC2Q92887 1545 aa10.27□□□□□ -0.77
SHROOM4-202ENST00000376020 SURF6O75683 361 aaKnown RBP10.27□□□□□ -0.77
SHROOM4-202ENST00000376020 SPAG1Q07617 926 aa10.27□□□□□ -0.77
SHROOM4-202ENST00000376020 TTC21BQ7Z4L5 1316 aa10.26□□□□□ -0.77
SHROOM4-202ENST00000376020 PRAG1Q86YV5 1406 aa10.26□□□□□ -0.77
SHROOM4-202ENST00000376020 NAP1L1P55209 391 aaKnown RBP10.26□□□□□ -0.77
SHROOM4-202ENST00000376020 RBM10P98175 930 aaKnown RBP10.26□□□□□ -0.77
SHROOM4-202ENST00000376020 EXOSC9Q06265 439 aaKnown RBP10.26□□□□□ -0.77
SHROOM4-202ENST00000376020 BBXQ8WY36 941 aaPredicted RBP10.26□□□□□ -0.77
SHROOM4-202ENST00000376020 NUCB1Q02818 461 aa10.26□□□□□ -0.77
SHROOM4-202ENST00000376020 TOMM22Q9NS69 142 aa10.26□□□□□ -0.77
SHROOM4-202ENST00000376020 ZSCAN23Q3MJ62 389 aa10.26□□□□□ -0.77
SHROOM4-202ENST00000376020 GIGYF2Q6Y7W6 1299 aaKnown RBP10.26□□□□□ -0.77
SHROOM4-202ENST00000376020 CCAR1Q8IX12 1150 aaKnown RBP10.26□□□□□ -0.77
SHROOM4-202ENST00000376020 MKRN1Q9UHC7 482 aaKnown RBP10.26□□□□□ -0.77
SHROOM4-202ENST00000376020 ADCY5O95622 1261 aa10.26□□□□□ -0.77
SHROOM4-202ENST00000376020 TAOK3Q9H2K8 898 aa10.26□□□□□ -0.77
SHROOM4-202ENST00000376020 NOLC1Q14978 699 aaKnown RBP eCLIP10.25□□□□□ -0.77
SHROOM4-202ENST00000376020 CCDC102AQ96A19 550 aa10.25□□□□□ -0.77
SHROOM4-202ENST00000376020 CLSTN1O94985 981 aa10.25□□□□□ -0.77
SHROOM4-202ENST00000376020 ZNF165P49910 485 aa10.25□□□□□ -0.77
SHROOM4-202ENST00000376020 SNW1Q13573 536 aaKnown RBP10.25□□□□□ -0.77
SHROOM4-202ENST00000376020 ODF2Q5BJF6 829 aa10.25□□□□□ -0.77
SHROOM4-202ENST00000376020 ALS2CR12Q96Q35 445 aa10.25□□□□□ -0.77
SHROOM4-202ENST00000376020 STX6O43752 255 aa10.25□□□□□ -0.77
SHROOM4-202ENST00000376020 CEP112Q8N8E3 955 aa10.25□□□□□ -0.77
SHROOM4-202ENST00000376020 TMPOP42166 694 aaKnown RBP10.25□□□□□ -0.77
SHROOM4-202ENST00000376020 CCDC91Q7Z6B0 441 aa10.25□□□□□ -0.77
SHROOM4-202ENST00000376020 SPC24Q8NBT2 197 aa10.25□□□□□ -0.77
SHROOM4-202ENST00000376020 SYNMO15061 1565 aa10.25□□□□□ -0.77
SHROOM4-202ENST00000376020 PRKAR2BP31323 418 aa10.25□□□□□ -0.77
SHROOM4-202ENST00000376020 CFAP100Q494V2 611 aa10.25□□□□□ -0.77
SHROOM4-202ENST00000376020 LMOD2Q6P5Q4 547 aa10.25□□□□□ -0.77
SHROOM4-202ENST00000376020 STMN4Q9H169 189 aaPredicted RBP10.25□□□□□ -0.77
SHROOM4-202ENST00000376020 BCAR3O75815 825 aa10.25□□□□□ -0.77
SHROOM4-202ENST00000376020 SPATS2Q86XZ4 545 aaKnown RBP10.25□□□□□ -0.77
SHROOM4-202ENST00000376020 ADGRL1O94910 1474 aa10.25□□□□□ -0.77
SHROOM4-202ENST00000376020 SSH2Q76I76 1423 aa10.25□□□□□ -0.77
SHROOM4-202ENST00000376020 VIRMAQ69YN4 1812 aaKnown RBP10.25□□□□□ -0.77
SHROOM4-202ENST00000376020 TOP1P11387 765 aaKnown RBP10.25□□□□□ -0.77
SHROOM4-202ENST00000376020 CASQ1P31415 396 aa10.25□□□□□ -0.77
SHROOM4-202ENST00000376020 CCDC50Q8IVM0 306 aa10.25□□□□□ -0.77
SHROOM4-202ENST00000376020 USO1O60763 962 aaKnown RBP10.24□□□□□ -0.77
SHROOM4-202ENST00000376020 ANKS4BQ8N8V4 417 aa10.24□□□□□ -0.77
SHROOM4-202ENST00000376020 PPP1R12BO60237 982 aaPredicted RBP10.24□□□□□ -0.77
SHROOM4-202ENST00000376020 FOXD4L6Q3SYB3 417 aaPredicted RBP10.24□□□□□ -0.77
SHROOM4-202ENST00000376020 FOXD4L3Q6VB84 417 aaPredicted RBP10.24□□□□□ -0.77
SHROOM4-202ENST00000376020 ARFGAP2Q8N6H7 521 aa10.24□□□□□ -0.77
SHROOM4-202ENST00000376020 KCNG4Q8TDN1 519 aa10.24□□□□□ -0.77
SHROOM4-202ENST00000376020 ADGRL2O95490 1459 aa10.24□□□□□ -0.77
SHROOM4-202ENST00000376020 GCOM1H8Y6P7 765 aaPredicted RBP10.24□□□□□ -0.77
SHROOM4-202ENST00000376020 SLU7O95391 586 aaKnown RBP10.24□□□□□ -0.77
SHROOM4-202ENST00000376020 MYZAPP0CAP1 466 aa10.24□□□□□ -0.77
SHROOM4-202ENST00000376020 CEP135Q66GS9 1140 aa10.24□□□□□ -0.77
SHROOM4-202ENST00000376020 SMARCC1Q92922 1105 aaPredicted RBP10.24□□□□□ -0.77
SHROOM4-202ENST00000376020 AOX1Q06278 1338 aa10.24□□□□□ -0.77
SHROOM4-202ENST00000376020 SAMD9Q5K651 1589 aa10.24□□□□□ -0.77
SHROOM4-202ENST00000376020 FAM114A1Q8IWE2 563 aa10.23□□□□□ -0.77
SHROOM4-202ENST00000376020 KIF24Q5T7B8 1368 aa10.23□□□□□ -0.77
SHROOM4-202ENST00000376020 NF2P35240 595 aa10.23□□□□□ -0.77
SHROOM4-202ENST00000376020 MAST1Q9Y2H9 1570 aa10.23□□□□□ -0.77
SHROOM4-202ENST00000376020 CDK13Q14004 1512 aaKnown RBP10.23□□□□□ -0.77
SHROOM4-202ENST00000376020 ZNF500O60304 480 aaPredicted RBP10.23□□□□□ -0.77
SHROOM4-202ENST00000376020 SMC1AQ14683 1233 aaKnown RBP10.23□□□□□ -0.77
SHROOM4-202ENST00000376020 SPA17Q15506 151 aa10.23□□□□□ -0.77
SHROOM4-202ENST00000376020 MYRIPQ8NFW9 859 aa10.23□□□□□ -0.77
SHROOM4-202ENST00000376020 BICRAQ9NZM4 1560 aa10.23□□□□□ -0.77
SHROOM4-202ENST00000376020 PAFAH1B1P43034 410 aa10.23□□□□□ -0.77
SHROOM4-202ENST00000376020 CCDC57Q2TAC2 916 aa10.23□□□□□ -0.77
SHROOM4-202ENST00000376020 RBM33Q96EV2 1170 aaKnown RBP10.23□□□□□ -0.77
SHROOM4-202ENST00000376020 BMP2KQ9NSY1 1161 aaPredicted RBP10.23□□□□□ -0.77
SHROOM4-202ENST00000376020 GNL3LQ9NVN8 582 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms