RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 CCDC196A0A1B0GTZ2 297 aa11.43□□□□□ -0.58
SPEN-201ENST00000375759 ANAPC15P60006 121 aa11.43□□□□□ -0.58
SPEN-201ENST00000375759 HMGB1P09429 215 aaKnown RBP11.43□□□□□ -0.58
SPEN-201ENST00000375759 POLR3GO15318 223 aaPredicted RBP11.43□□□□□ -0.58
SPEN-201ENST00000375759 RNF187Q5TA31 235 aaPredicted RBP11.43□□□□□ -0.58
SPEN-201ENST00000375759 SPECC1LQ69YQ0 1117 aa11.43□□□□□ -0.58
SPEN-201ENST00000375759 GSTTP1A0A1W2PQM5 241 aa11.42□□□□□ -0.58
SPEN-201ENST00000375759 PPP4R3BQ5MIZ7 849 aa11.42□□□□□ -0.58
SPEN-201ENST00000375759 SMARCC1Q92922 1105 aaPredicted RBP11.42□□□□□ -0.58
SPEN-201ENST00000375759 C16orf45Q96MC5 204 aaPredicted RBP11.42□□□□□ -0.58
SPEN-201ENST00000375759 ALS2CR12Q96Q35 445 aa11.42□□□□□ -0.58
SPEN-201ENST00000375759 HECW1Q76N89 1606 aa11.42□□□□□ -0.58
SPEN-201ENST00000375759 NEBLO76041 1014 aa11.42□□□□□ -0.58
SPEN-201ENST00000375759 ZNF287Q9HBT7 754 aa11.42□□□□□ -0.58
SPEN-201ENST00000375759 NUP88Q99567 741 aaPredicted RBP11.42□□□□□ -0.58
SPEN-201ENST00000375759 CCDC178Q5BJE1 867 aa11.42□□□□□ -0.58
SPEN-201ENST00000375759 KIAA1107Q9UPP5 1409 aa11.42□□□□□ -0.58
SPEN-201ENST00000375759 TIGD1Q96MW7 591 aa11.42□□□□□ -0.58
SPEN-201ENST00000375759 GOPCQ9HD26 462 aa11.42□□□□□ -0.58
SPEN-201ENST00000375759 XPCQ01831 940 aaPredicted RBP11.42□□□□□ -0.58
SPEN-201ENST00000375759 STX1AQ16623 288 aa11.42□□□□□ -0.58
SPEN-201ENST00000375759 TICAM2Q86XR7 235 aa11.42□□□□□ -0.58
SPEN-201ENST00000375759 YEATS4O95619 227 aa11.41□□□□□ -0.58
SPEN-201ENST00000375759 MATR3P43243 847 aaKnown RBP eCLIP11.41□□□□□ -0.58
SPEN-201ENST00000375759 HOOK3Q86VS8 718 aa11.41□□□□□ -0.58
SPEN-201ENST00000375759 GLRX3O76003 335 aaKnown RBP11.41□□□□□ -0.58
SPEN-201ENST00000375759 BMS1Q14692 1282 aaKnown RBP11.41□□□□□ -0.58
SPEN-201ENST00000375759 NUTM2GQ5VZR2 741 aa11.41□□□□□ -0.58
SPEN-201ENST00000375759 SULT6B1Q6IMI4 303 aa11.41□□□□□ -0.58
SPEN-201ENST00000375759 KIF1BPQ96EK5 621 aa11.41□□□□□ -0.58
SPEN-201ENST00000375759 FEZ1Q99689 392 aa11.41□□□□□ -0.58
SPEN-201ENST00000375759 SEC63Q9UGP8 760 aaKnown RBP11.41□□□□□ -0.58
SPEN-201ENST00000375759 TMEM132EQ6IEE7 984 aa11.41□□□□□ -0.58
SPEN-201ENST00000375759 RAB34Q9BZG1 259 aa11.41□□□□□ -0.58
SPEN-201ENST00000375759 ZNF76P36508 570 aa11.41□□□□□ -0.58
SPEN-201ENST00000375759 DDX19AQ9NUU7 478 aaKnown RBP11.41□□□□□ -0.58
SPEN-201ENST00000375759 ZNF692Q9BU19 519 aaPredicted RBP11.4□□□□□ -0.58
SPEN-201ENST00000375759 EFCAB5A4FU69 1503 aa11.4□□□□□ -0.58
SPEN-201ENST00000375759 TATP17735 454 aaPredicted RBP11.4□□□□□ -0.58
SPEN-201ENST00000375759 CEP126Q9P2H0 1117 aa11.4□□□□□ -0.58
SPEN-201ENST00000375759 ANKRD30BQ9BXX2 1392 aa11.4□□□□□ -0.58
SPEN-201ENST00000375759 BCCIPQ9P287 314 aaKnown RBP eCLIP11.4□□□□□ -0.58
SPEN-201ENST00000375759 SPECC1Q5M775 1068 aa11.4□□□□□ -0.58
SPEN-201ENST00000375759 EHBP1Q8NDI1 1231 aa11.4□□□□□ -0.58
SPEN-201ENST00000375759 C8orf76Q96K31 380 aa11.4□□□□□ -0.58
SPEN-201ENST00000375759 FGD5Q6ZNL6 1462 aa11.4□□□□□ -0.58
SPEN-201ENST00000375759 SNW1Q13573 536 aaKnown RBP11.4□□□□□ -0.59
SPEN-201ENST00000375759 DHX29Q7Z478 1369 aaKnown RBP11.39□□□□□ -0.59
SPEN-201ENST00000375759 IVLP07476 585 aa11.39□□□□□ -0.59
SPEN-201ENST00000375759 GTF2F1P35269 517 aaKnown RBP eCLIP11.39□□□□□ -0.59
SPEN-201ENST00000375759 KLHL10Q6JEL2 608 aa11.39□□□□□ -0.59
SPEN-201ENST00000375759 MX1P20591 662 aa11.39□□□□□ -0.59
SPEN-201ENST00000375759 BBXQ8WY36 941 aaPredicted RBP11.39□□□□□ -0.59
SPEN-201ENST00000375759 AIDAQ96BJ3 306 aa11.39□□□□□ -0.59
SPEN-201ENST00000375759 UVSSAQ2YD98 709 aa11.39□□□□□ -0.59
SPEN-201ENST00000375759 CCDC150Q8NCX0 1101 aa11.39□□□□□ -0.59
SPEN-201ENST00000375759 GPATCH11Q8N954 259 aa11.39□□□□□ -0.59
SPEN-201ENST00000375759 TNIP1Q15025 636 aa11.39□□□□□ -0.59
SPEN-201ENST00000375759 CABP4P57796 275 aa11.38□□□□□ -0.59
SPEN-201ENST00000375759 ADCY5O95622 1261 aa11.38□□□□□ -0.59
SPEN-201ENST00000375759 TMEM57Q8N5G2 664 aa11.38□□□□□ -0.59
SPEN-201ENST00000375759 TNPO1Q92973 898 aaKnown RBP11.38□□□□□ -0.59
SPEN-201ENST00000375759 FCHSD2O94868 740 aa11.38□□□□□ -0.59
SPEN-201ENST00000375759 KIF20AO95235 890 aa11.38□□□□□ -0.59
SPEN-201ENST00000375759 ANKRD18BA2A2Z9 1011 aa11.38□□□□□ -0.59
SPEN-201ENST00000375759 C6orf163Q5TEZ5 329 aa11.38□□□□□ -0.59
SPEN-201ENST00000375759 LIMCH1Q9UPQ0 1083 aa11.38□□□□□ -0.59
SPEN-201ENST00000375759 CCDC171Q6TFL3 1326 aa11.38□□□□□ -0.59
SPEN-201ENST00000375759 KRT222Q8N1A0 295 aa11.38□□□□□ -0.59
SPEN-201ENST00000375759 NBPF1Q3BBV0 1214 aa11.38□□□□□ -0.59
SPEN-201ENST00000375759 CEP135Q66GS9 1140 aa11.38□□□□□ -0.59
SPEN-201ENST00000375759 PYM1Q9BRP8 204 aaKnown RBP11.38□□□□□ -0.59
SPEN-201ENST00000375759 FAM177BA6PVY3 158 aa11.38□□□□□ -0.59
SPEN-201ENST00000375759 SLFN5Q08AF3 891 aa11.38□□□□□ -0.59
SPEN-201ENST00000375759 HLTFQ14527 1009 aaKnown RBP eCLIP11.38□□□□□ -0.593e-6■■■□□ 19.2
SPEN-201ENST00000375759 LRP2BPQ9P2M1 347 aa11.38□□□□□ -0.59
SPEN-201ENST00000375759 ATAD2BQ9ULI0 1458 aa11.38□□□□□ -0.59
SPEN-201ENST00000375759 LMAN1P49257 510 aa11.38□□□□□ -0.59
SPEN-201ENST00000375759 ZNF644Q9H582 1327 aaPredicted RBP11.37□□□□□ -0.59
SPEN-201ENST00000375759 MYL6BP14649 208 aa11.37□□□□□ -0.59
SPEN-201ENST00000375759 CNNM3Q8NE01 707 aa11.37□□□□□ -0.59
SPEN-201ENST00000375759 USP25Q9UHP3 1055 aa11.37□□□□□ -0.59
SPEN-201ENST00000375759 MNAT1P51948 309 aa11.37□□□□□ -0.59
SPEN-201ENST00000375759 SPG7Q9UQ90 795 aa11.37□□□□□ -0.59
SPEN-201ENST00000375759 AKAP2Q9Y2D5 859 aa11.37□□□□□ -0.59
SPEN-201ENST00000375759 UBE4AQ14139 1066 aa11.37□□□□□ -0.59
SPEN-201ENST00000375759 ALDH1L2Q3SY69 923 aa11.37□□□□□ -0.59
SPEN-201ENST00000375759 CEP112Q8N8E3 955 aa11.37□□□□□ -0.59
SPEN-201ENST00000375759 DDX12PQ92771 950 aa11.37□□□□□ -0.59
SPEN-201ENST00000375759 RBM42Q9BTD8 480 aaKnown RBP11.37□□□□□ -0.59
SPEN-201ENST00000375759 TRMT1Q9NXH9 659 aaKnown RBP11.37□□□□□ -0.59
SPEN-201ENST00000375759 BTBD11A6QL63 1104 aa11.37□□□□□ -0.59
SPEN-201ENST00000375759 LARP1Q6PKG0 1096 aaKnown RBP11.37□□□□□ -0.59
SPEN-201ENST00000375759 FERMT3Q86UX7 667 aa11.37□□□□□ -0.59
SPEN-201ENST00000375759 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.37□□□□□ -0.59
SPEN-201ENST00000375759 C9orf84Q5VXU9 1444 aa11.37□□□□□ -0.59
SPEN-201ENST00000375759 UBE2HP62256 183 aa11.37□□□□□ -0.59
SPEN-201ENST00000375759 FSD2A1L4K1 749 aa11.36□□□□□ -0.59
SPEN-201ENST00000375759 CFAP70Q5T0N1 1121 aa11.36□□□□□ -0.59
SPEN-201ENST00000375759 FAM114A1Q8IWE2 563 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms