RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 SUPT6HQ7KZ85 1726 aaKnown RBP23.08■■□□□ 1.29
COL15A1-201ENST00000375001 TTC39AQ5SRH9 613 aa23.08■■□□□ 1.28
COL15A1-201ENST00000375001 IL1RAPL2Q9NP60 686 aa23.08■■□□□ 1.28
COL15A1-201ENST00000375001 CKAP2LQ8IYA6 745 aa23.08■■□□□ 1.28
COL15A1-201ENST00000375001 ADCY5O95622 1261 aa23.07■■□□□ 1.28
COL15A1-201ENST00000375001 CASTP20810 708 aaKnown RBP23.07■■□□□ 1.28
COL15A1-201ENST00000375001 CCDC83Q8IWF9 413 aa23.07■■□□□ 1.28
COL15A1-201ENST00000375001 SPECC1Q5M775 1068 aa23.07■■□□□ 1.28
COL15A1-201ENST00000375001 KRT222Q8N1A0 295 aa23.07■■□□□ 1.28
COL15A1-201ENST00000375001 UBE4AQ14139 1066 aa23.07■■□□□ 1.28
COL15A1-201ENST00000375001 CYB5RLQ6IPT4 315 aa23.07■■□□□ 1.28
COL15A1-201ENST00000375001 SSH1Q8WYL5 1049 aa23.07■■□□□ 1.28
COL15A1-201ENST00000375001 GOPCQ9HD26 462 aa23.07■■□□□ 1.28
COL15A1-201ENST00000375001 NCOA1Q15788 1441 aa23.07■■□□□ 1.28
COL15A1-201ENST00000375001 PRIMPOLQ96LW4 560 aa23.07■■□□□ 1.28
COL15A1-201ENST00000375001 SSR1P43307 286 aaKnown RBP23.06■■□□□ 1.28
COL15A1-201ENST00000375001 CCDC158Q5M9N0 1113 aa23.06■■□□□ 1.28
COL15A1-201ENST00000375001 CEP63Q96MT8 703 aa23.06■■□□□ 1.28
COL15A1-201ENST00000375001 GRIN2BQ13224 1484 aa23.06■■□□□ 1.28
COL15A1-201ENST00000375001 KLHL10Q6JEL2 608 aa23.06■■□□□ 1.28
COL15A1-201ENST00000375001 THUMPD2Q9BTF0 503 aaKnown RBP23.06■■□□□ 1.28
COL15A1-201ENST00000375001 SYNJ2O15056 1496 aa23.06■■□□□ 1.28
COL15A1-201ENST00000375001 NSD3Q9BZ95 1437 aa23.06■■□□□ 1.28
COL15A1-201ENST00000375001 CDKL5O76039 1030 aa23.05■■□□□ 1.28
COL15A1-201ENST00000375001 SRCIN1Q9C0H9 1055 aa23.05■■□□□ 1.28
COL15A1-201ENST00000375001 TXNDC2Q86VQ3 553 aa23.05■■□□□ 1.28
COL15A1-201ENST00000375001 DUSP27Q5VZP5 1158 aa23.05■■□□□ 1.28
COL15A1-201ENST00000375001 CPLX3Q8WVH0 158 aa23.05■■□□□ 1.28
COL15A1-201ENST00000375001 NKTRP30414 1462 aaKnown RBP23.04■■□□□ 1.28
COL15A1-201ENST00000375001 PAFAH1B1P43034 410 aa23.04■■□□□ 1.28
COL15A1-201ENST00000375001 CCDC178Q5BJE1 867 aa23.04■■□□□ 1.28
COL15A1-201ENST00000375001 RPAP2Q8IXW5 612 aaPredicted RBP23.04■■□□□ 1.28
COL15A1-201ENST00000375001 BMP2KQ9NSY1 1161 aaPredicted RBP23.04■■□□□ 1.28
COL15A1-201ENST00000375001 CLCN1P35523 988 aa23.04■■□□□ 1.28
COL15A1-201ENST00000375001 IRX3P78415 501 aaPredicted RBP23.04■■□□□ 1.28
COL15A1-201ENST00000375001 NEMFO60524 1076 aa23.04■■□□□ 1.28
COL15A1-201ENST00000375001 PDIA4P13667 645 aaKnown RBP23.04■■□□□ 1.28
COL15A1-201ENST00000375001 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.03■■□□□ 1.28
COL15A1-201ENST00000375001 POTEB2H3BUK9 544 aa23.03■■□□□ 1.28
COL15A1-201ENST00000375001 SNW1Q13573 536 aaKnown RBP23.03■■□□□ 1.28
COL15A1-201ENST00000375001 ABTB2Q8N961 1025 aa23.03■■□□□ 1.28
COL15A1-201ENST00000375001 EXOC6BQ9Y2D4 811 aa23.03■■□□□ 1.28
COL15A1-201ENST00000375001 FCHSD2O94868 740 aa23.03■■□□□ 1.28
COL15A1-201ENST00000375001 SCAND2PQ9GZW5 306 aaPredicted RBP23.03■■□□□ 1.28
COL15A1-201ENST00000375001 ZSWIM4Q9H7M6 989 aa23.03■■□□□ 1.28
COL15A1-201ENST00000375001 GSTTP1A0A1W2PQM5 241 aa23.02■■□□□ 1.28
COL15A1-201ENST00000375001 CCDC57Q2TAC2 916 aa23.02■■□□□ 1.28
COL15A1-201ENST00000375001 CEP135Q66GS9 1140 aa23.02■■□□□ 1.28
COL15A1-201ENST00000375001 ATP2C2O75185 946 aa23.02■■□□□ 1.28
COL15A1-201ENST00000375001 RRS1Q15050 365 aaKnown RBP23.02■■□□□ 1.28
COL15A1-201ENST00000375001 SMARCA5O60264 1052 aaPredicted RBP23.02■■□□□ 1.28
COL15A1-201ENST00000375001 RSPH14Q9UHP6 348 aa23.02■■□□□ 1.28
COL15A1-201ENST00000375001 HECW1Q76N89 1606 aa23.02■■□□□ 1.27
COL15A1-201ENST00000375001 SRGAP3O43295 1099 aa23.02■■□□□ 1.27
COL15A1-201ENST00000375001 CDK13Q14004 1512 aaKnown RBP23.01■■□□□ 1.27
COL15A1-201ENST00000375001 FAM177BA6PVY3 158 aa23.01■■□□□ 1.27
COL15A1-201ENST00000375001 LRPPRCP42704 1394 aaKnown RBP23.01■■□□□ 1.27
COL15A1-201ENST00000375001 HLTFQ14527 1009 aaKnown RBP eCLIP23.01■■□□□ 1.27
COL15A1-201ENST00000375001 SOGA3Q5TF21 947 aa23.01■■□□□ 1.27
COL15A1-201ENST00000375001 AACSQ86V21 672 aa23.01■■□□□ 1.27
COL15A1-201ENST00000375001 NACAP1Q9BZK3 213 aa23.01■■□□□ 1.27
COL15A1-201ENST00000375001 GCOM1H8Y6P7 765 aaPredicted RBP23.01■■□□□ 1.27
COL15A1-201ENST00000375001 MYZAPP0CAP1 466 aa23.01■■□□□ 1.27
COL15A1-201ENST00000375001 GDPD2Q9HCC8 539 aa23■■□□□ 1.27
COL15A1-201ENST00000375001 KRT32Q14532 448 aa23■■□□□ 1.27
COL15A1-201ENST00000375001 NFE2L2Q16236 605 aa23■■□□□ 1.27
COL15A1-201ENST00000375001 TMC6Q7Z403 805 aa23■■□□□ 1.27
COL15A1-201ENST00000375001 IGHDP01880 384 aa23■■□□□ 1.27
COL15A1-201ENST00000375001 ATP2B2Q01814 1243 aa22.99■■□□□ 1.27
COL15A1-201ENST00000375001 PCF11O94913 1555 aaKnown RBP22.99■■□□□ 1.27
COL15A1-201ENST00000375001 GSDMDP57764 484 aa22.99■■□□□ 1.27
COL15A1-201ENST00000375001 WWC2Q6AWC2 1192 aa22.99■■□□□ 1.27
COL15A1-201ENST00000375001 PAXBP1Q9Y5B6 917 aa22.99■■□□□ 1.27
COL15A1-201ENST00000375001 SRRTQ9BXP5 876 aaKnown RBP22.98■■□□□ 1.27
COL15A1-201ENST00000375001 RBM27Q9P2N5 1060 aaKnown RBP22.98■■□□□ 1.27
COL15A1-201ENST00000375001 LIG1P18858 919 aa22.98■■□□□ 1.27
COL15A1-201ENST00000375001 SPECC1LQ69YQ0 1117 aa22.98■■□□□ 1.27
COL15A1-201ENST00000375001 NUTM1Q86Y26 1132 aa22.98■■□□□ 1.27
COL15A1-201ENST00000375001 NUP88Q99567 741 aaPredicted RBP22.98■■□□□ 1.27
COL15A1-201ENST00000375001 MAATS1Q7Z4T9 603 aa22.98■■□□□ 1.27
COL15A1-201ENST00000375001 PLEKHO1Q53GL0 409 aaPredicted RBP22.98■■□□□ 1.27
COL15A1-201ENST00000375001 CNNM1Q9NRU3 951 aa22.98■■□□□ 1.27
COL15A1-201ENST00000375001 PLEKHH2Q8IVE3 1493 aa22.97■■□□□ 1.27
COL15A1-201ENST00000375001 ZNF830Q96NB3 372 aaPredicted RBP22.97■■□□□ 1.27
COL15A1-201ENST00000375001 CACNA2D4Q7Z3S7 1137 aa22.97■■□□□ 1.27
COL15A1-201ENST00000375001 FKBP4Q02790 459 aaKnown RBP eCLIP22.96■■□□□ 1.27
COL15A1-201ENST00000375001 FKBP15Q5T1M5 1219 aa22.96■■□□□ 1.27
COL15A1-201ENST00000375001 GIGYF2Q6Y7W6 1299 aaKnown RBP22.96■■□□□ 1.27
COL15A1-201ENST00000375001 USO1O60763 962 aaKnown RBP22.96■■□□□ 1.27
COL15A1-201ENST00000375001 STAMBPO95630 424 aa22.96■■□□□ 1.27
COL15A1-201ENST00000375001 PIBF1Q8WXW3 757 aa22.96■■□□□ 1.27
COL15A1-201ENST00000375001 ZNF526Q8TF50 670 aaPredicted RBP22.95■■□□□ 1.27
COL15A1-201ENST00000375001 EPRSP07814 1512 aaKnown RBP22.95■■□□□ 1.26
COL15A1-201ENST00000375001 MIS18AQ9NYP9 233 aa22.95■■□□□ 1.26
COL15A1-201ENST00000375001 IGSF3O75054 1194 aa22.95■■□□□ 1.26
COL15A1-201ENST00000375001 HSPA4P34932 840 aa22.95■■□□□ 1.26
COL15A1-201ENST00000375001 PLCD3Q8N3E9 789 aa22.95■■□□□ 1.26
COL15A1-201ENST00000375001 CETN2P41208 172 aa22.95■■□□□ 1.26
COL15A1-201ENST00000375001 GNG11P61952 73 aa22.95■■□□□ 1.26
COL15A1-201ENST00000375001 IVLP07476 585 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms