RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 CEP350Q5VT06 3117 aa14.74□□□□□ -0.05
HLA-DQA1-202ENST00000374949 LINC00116Q8NCU8 138 aa14.73□□□□□ -0.05
HLA-DQA1-202ENST00000374949 GPBP1L1Q9HC44 474 aaPredicted RBP14.73□□□□□ -0.05
HLA-DQA1-202ENST00000374949 KIAA1551Q9HCM1 1747 aa14.72□□□□□ -0.05
HLA-DQA1-202ENST00000374949 LOC102724428A0A0B4J2F2 783 aa14.72□□□□□ -0.05
HLA-DQA1-202ENST00000374949 SIK1P57059 783 aa14.72□□□□□ -0.05
HLA-DQA1-202ENST00000374949 AMER1Q5JTC6 1135 aaPredicted RBP14.72□□□□□ -0.05
HLA-DQA1-202ENST00000374949 CC2D1BQ5T0F9 858 aaKnown RBP14.72□□□□□ -0.05
HLA-DQA1-202ENST00000374949 CICQ96RK0 1608 aaPredicted RBP14.72□□□□□ -0.05
HLA-DQA1-202ENST00000374949 GNPATO15228 680 aa14.71□□□□□ -0.05
HLA-DQA1-202ENST00000374949 ITPK1Q13572 414 aa14.71□□□□□ -0.05
HLA-DQA1-202ENST00000374949 NKX1-1Q15270 411 aaPredicted RBP14.71□□□□□ -0.05
HLA-DQA1-202ENST00000374949 TMOD3Q9NYL9 352 aa14.71□□□□□ -0.05
HLA-DQA1-202ENST00000374949 SPG7Q9UQ90 795 aa14.71□□□□□ -0.05
HLA-DQA1-202ENST00000374949 NPC1L1Q9UHC9 1359 aa14.71□□□□□ -0.06
HLA-DQA1-202ENST00000374949 KIF13BQ9NQT8 1826 aa14.71□□□□□ -0.06
HLA-DQA1-202ENST00000374949 N4BP2Q86UW6 1770 aaPredicted RBP14.7□□□□□ -0.06
HLA-DQA1-202ENST00000374949 HMGB2P26583 209 aaKnown RBP14.7□□□□□ -0.06
HLA-DQA1-202ENST00000374949 SSFA2P28290 1259 aa14.7□□□□□ -0.06
HLA-DQA1-202ENST00000374949 EYA1Q99502 592 aa14.7□□□□□ -0.06
HLA-DQA1-202ENST00000374949 ASAP1Q9ULH1 1129 aa14.7□□□□□ -0.06
HLA-DQA1-202ENST00000374949 COL5A3P25940 1745 aaPredicted RBP14.69□□□□□ -0.06
HLA-DQA1-202ENST00000374949 KDRP35968 1356 aa14.69□□□□□ -0.06
HLA-DQA1-202ENST00000374949 PXDNLA1KZ92 1463 aa14.69□□□□□ -0.06
HLA-DQA1-202ENST00000374949 PHKG2P15735 406 aa14.68□□□□□ -0.06
HLA-DQA1-202ENST00000374949 C4AP0C0L4 1744 aa14.68□□□□□ -0.06
HLA-DQA1-202ENST00000374949 MYBBP1AQ9BQG0 1328 aaKnown RBP14.67□□□□□ -0.06
HLA-DQA1-202ENST00000374949 ATP6V1AP38606 617 aa14.67□□□□□ -0.06
HLA-DQA1-202ENST00000374949 ZNF831Q5JPB2 1677 aa14.67□□□□□ -0.06
HLA-DQA1-202ENST00000374949 MMP10P09238 476 aa14.66□□□□□ -0.06
HLA-DQA1-202ENST00000374949 IFFO2Q5TF58 517 aa14.66□□□□□ -0.06
HLA-DQA1-202ENST00000374949 IFNL2Q8IZJ0 200 aa14.66□□□□□ -0.06
HLA-DQA1-202ENST00000374949 MRS2Q9HD23 443 aa14.66□□□□□ -0.06
HLA-DQA1-202ENST00000374949 ATG3Q9NT62 314 aa14.66□□□□□ -0.06
HLA-DQA1-202ENST00000374949 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.66□□□□□ -0.06
HLA-DQA1-202ENST00000374949 POLKQ9UBT6 870 aa14.66□□□□□ -0.06
HLA-DQA1-202ENST00000374949 HSPA6P17066 643 aa14.65□□□□□ -0.06
HLA-DQA1-202ENST00000374949 TNNT2P45379 298 aaPredicted RBP14.65□□□□□ -0.06
HLA-DQA1-202ENST00000374949 EIF4A2Q14240 407 aaKnown RBP14.65□□□□□ -0.06
HLA-DQA1-202ENST00000374949 BRCA1P38398 1863 aaKnown RBP14.65□□□□□ -0.06
HLA-DQA1-202ENST00000374949 C10orf71Q711Q0 1435 aa14.65□□□□□ -0.06
HLA-DQA1-202ENST00000374949 CCDC184Q52MB2 194 aa14.64□□□□□ -0.07
HLA-DQA1-202ENST00000374949 MORC1Q86VD1 984 aa14.63□□□□□ -0.07
HLA-DQA1-202ENST00000374949 KDM6AO15550 1401 aaPredicted RBP14.63□□□□□ -0.07
HLA-DQA1-202ENST00000374949 MYH14Q7Z406 1995 aaKnown RBP14.62□□□□□ -0.07
HLA-DQA1-202ENST00000374949 KIF3CO14782 793 aa14.62□□□□□ -0.07
HLA-DQA1-202ENST00000374949 PPP2R1AP30153 589 aa14.62□□□□□ -0.07
HLA-DQA1-202ENST00000374949 YTHDC1Q96MU7 727 aaKnown RBP14.62□□□□□ -0.07
HLA-DQA1-202ENST00000374949 SLC4A9Q96Q91 983 aa14.62□□□□□ -0.07
HLA-DQA1-202ENST00000374949 TJP1Q07157 1748 aa14.61□□□□□ -0.07
HLA-DQA1-202ENST00000374949 RBM42Q9BTD8 480 aaKnown RBP14.61□□□□□ -0.07
HLA-DQA1-202ENST00000374949 RTCBQ9Y3I0 505 aaKnown RBP14.61□□□□□ -0.07
HLA-DQA1-202ENST00000374949 PLEKHG2Q9H7P9 1386 aa14.6□□□□□ -0.07
HLA-DQA1-202ENST00000374949 A0A0G2JLW4 131 aa14.6□□□□□ -0.07
HLA-DQA1-202ENST00000374949 BCS1LQ9Y276 419 aa14.6□□□□□ -0.07
HLA-DQA1-202ENST00000374949 ARFGEF1Q9Y6D6 1849 aa14.59□□□□□ -0.07
HLA-DQA1-202ENST00000374949 TRAPPC3LQ5T215 181 aa14.59□□□□□ -0.07
HLA-DQA1-202ENST00000374949 CNTNAP4Q9C0A0 1308 aa14.59□□□□□ -0.07
HLA-DQA1-202ENST00000374949 GYS1P13807 737 aa14.58□□□□□ -0.08
HLA-DQA1-202ENST00000374949 ZNF530Q6P9A1 599 aaPredicted RBP14.58□□□□□ -0.08
HLA-DQA1-202ENST00000374949 ARHGEF1Q92888 912 aaKnown RBP14.58□□□□□ -0.08
HLA-DQA1-202ENST00000374949 ERVV-2B6SEH9 535 aa14.57□□□□□ -0.08
HLA-DQA1-202ENST00000374949 DPEP1P16444 411 aa14.57□□□□□ -0.08
HLA-DQA1-202ENST00000374949 ADRA2BP18089 450 aa14.57□□□□□ -0.08
HLA-DQA1-202ENST00000374949 TGFB2P61812 414 aa14.57□□□□□ -0.08
HLA-DQA1-202ENST00000374949 FAM9BQ8IZU0 186 aa14.57□□□□□ -0.08
HLA-DQA1-202ENST00000374949 NLGN1Q8N2Q7 840 aa14.57□□□□□ -0.08
HLA-DQA1-202ENST00000374949 PNISRQ8TF01 805 aaKnown RBP14.57□□□□□ -0.08
HLA-DQA1-202ENST00000374949 DCAF5Q96JK2 942 aa14.57□□□□□ -0.08
HLA-DQA1-202ENST00000374949 CCDC87Q9NVE4 849 aa14.57□□□□□ -0.08
HLA-DQA1-202ENST00000374949 SCN11AQ9UI33 1791 aa14.56□□□□□ -0.08
HLA-DQA1-202ENST00000374949 HSP90AB1P08238 724 aaKnown RBP14.56□□□□□ -0.08
HLA-DQA1-202ENST00000374949 RFC4P35249 363 aa14.56□□□□□ -0.08
HLA-DQA1-202ENST00000374949 ARHGAP27Q6ZUM4 889 aa14.56□□□□□ -0.08
HLA-DQA1-202ENST00000374949 AEBP1Q8IUX7 1158 aa14.56□□□□□ -0.08
HLA-DQA1-202ENST00000374949 ADAMTS7Q9UKP4 1686 aa14.55□□□□□ -0.08
HLA-DQA1-202ENST00000374949 WDR90Q96KV7 1748 aa14.55□□□□□ -0.08
HLA-DQA1-202ENST00000374949 RPS6KA4O75676 772 aa14.55□□□□□ -0.08
HLA-DQA1-202ENST00000374949 FCHSD2O94868 740 aa14.55□□□□□ -0.08
HLA-DQA1-202ENST00000374949 CABP4P57796 275 aa14.55□□□□□ -0.08
HLA-DQA1-202ENST00000374949 PLEKHO1Q53GL0 409 aaPredicted RBP14.55□□□□□ -0.08
HLA-DQA1-202ENST00000374949 RC3H1Q5TC82 1133 aaKnown RBP14.55□□□□□ -0.08
HLA-DQA1-202ENST00000374949 NMRK2Q9NPI5 230 aa14.55□□□□□ -0.08
HLA-DQA1-202ENST00000374949 PARP3Q9Y6F1 533 aa14.55□□□□□ -0.08
HLA-DQA1-202ENST00000374949 PTCD1O75127 700 aaKnown RBP14.54□□□□□ -0.08
HLA-DQA1-202ENST00000374949 SRP68Q9UHB9 627 aaKnown RBP14.54□□□□□ -0.08
HLA-DQA1-202ENST00000374949 VIRMAQ69YN4 1812 aaKnown RBP14.53□□□□□ -0.08
HLA-DQA1-202ENST00000374949 CRKLP46109 303 aaKnown RBP14.53□□□□□ -0.08
HLA-DQA1-202ENST00000374949 USP42Q9H9J4 1324 aaKnown RBP14.52□□□□□ -0.08
HLA-DQA1-202ENST00000374949 CENPBP07199 599 aaPredicted RBP14.52□□□□□ -0.09
HLA-DQA1-202ENST00000374949 MTHFSP49914 203 aa14.52□□□□□ -0.09
HLA-DQA1-202ENST00000374949 APLP1P51693 650 aa14.52□□□□□ -0.09
HLA-DQA1-202ENST00000374949 DDR1Q08345 913 aa14.52□□□□□ -0.09
HLA-DQA1-202ENST00000374949 AMOTQ4VCS5 1084 aa14.52□□□□□ -0.09
HLA-DQA1-202ENST00000374949 C1orf141Q5JVX7 400 aa14.52□□□□□ -0.09
HLA-DQA1-202ENST00000374949 KCPQ6ZWJ8 1503 aa14.51□□□□□ -0.09
HLA-DQA1-202ENST00000374949 TOMM70O94826 608 aa14.51□□□□□ -0.09
HLA-DQA1-202ENST00000374949 KCNA3P22001 575 aa14.51□□□□□ -0.09
HLA-DQA1-202ENST00000374949 FKBP8Q14318 412 aa14.51□□□□□ -0.09
HLA-DQA1-202ENST00000374949 C9orf131Q5VYM1 1079 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms