RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 LRRC45Q96CN5 670 aa9.71□□□□□ -0.86
HSPG2-203ENST00000374695 PLVAPQ9BX97 442 aa9.71□□□□□ -0.86
HSPG2-203ENST00000374695 YEATS4O95619 227 aa9.71□□□□□ -0.86
HSPG2-203ENST00000374695 BACH2Q9BYV9 841 aa9.71□□□□□ -0.86
HSPG2-203ENST00000374695 TTC21AQ8NDW8 1320 aa9.7□□□□□ -0.86
HSPG2-203ENST00000374695 IFI16Q16666 785 aaKnown RBP9.7□□□□□ -0.86
HSPG2-203ENST00000374695 HOMER2Q9NSB8 354 aa9.7□□□□□ -0.86
HSPG2-203ENST00000374695 MTMR7Q9Y216 660 aa9.7□□□□□ -0.86
HSPG2-203ENST00000374695 TOP1P11387 765 aaKnown RBP9.7□□□□□ -0.86
HSPG2-203ENST00000374695 WDR66Q8TBY9 1149 aa9.7□□□□□ -0.86
HSPG2-203ENST00000374695 ZNF428Q96B54 188 aa9.7□□□□□ -0.86
HSPG2-203ENST00000374695 GPRASP1Q5JY77 1395 aa9.7□□□□□ -0.86
HSPG2-203ENST00000374695 MPHOSPH10O00566 681 aaKnown RBP9.7□□□□□ -0.86
HSPG2-203ENST00000374695 CCDC178Q5BJE1 867 aa9.7□□□□□ -0.86
HSPG2-203ENST00000374695 CCDC196A0A1B0GTZ2 297 aa9.7□□□□□ -0.86
HSPG2-203ENST00000374695 HMGB1P1B2RPK0 211 aaPredicted RBP9.7□□□□□ -0.86
HSPG2-203ENST00000374695 TUBBP07437 444 aa9.7□□□□□ -0.86
HSPG2-203ENST00000374695 MCM4P33991 863 aa9.7□□□□□ -0.86
HSPG2-203ENST00000374695 GTF2A1P52655 376 aaPredicted RBP9.7□□□□□ -0.86
HSPG2-203ENST00000374695 CKAP4Q07065 602 aaKnown RBP9.7□□□□□ -0.86
HSPG2-203ENST00000374695 ZWINTO95229 277 aa9.7□□□□□ -0.86
HSPG2-203ENST00000374695 SMARCC1Q92922 1105 aaPredicted RBP9.7□□□□□ -0.86
HSPG2-203ENST00000374695 STX1AQ16623 288 aa9.69□□□□□ -0.86
HSPG2-203ENST00000374695 KIF4BQ2VIQ3 1234 aa9.69□□□□□ -0.86
HSPG2-203ENST00000374695 PABPN1LA6NDY0 278 aaKnown RBP9.69□□□□□ -0.86
HSPG2-203ENST00000374695 GOLIM4O00461 696 aa9.69□□□□□ -0.86
HSPG2-203ENST00000374695 WDR63Q8IWG1 891 aa9.69□□□□□ -0.86
HSPG2-203ENST00000374695 ATF3P18847 181 aa9.69□□□□□ -0.86
HSPG2-203ENST00000374695 TMEM266Q2M3C6 531 aa9.69□□□□□ -0.86
HSPG2-203ENST00000374695 RAI14Q9P0K7 980 aa9.69□□□□□ -0.86
HSPG2-203ENST00000374695 UBE4AQ14139 1066 aa9.69□□□□□ -0.86
HSPG2-203ENST00000374695 NOL3O60936 208 aaKnown RBP9.69□□□□□ -0.86
HSPG2-203ENST00000374695 MROH2BQ7Z745 1585 aa9.69□□□□□ -0.86
HSPG2-203ENST00000374695 ZNF76P36508 570 aa9.69□□□□□ -0.86
HSPG2-203ENST00000374695 TDO2P48775 406 aa9.69□□□□□ -0.86
HSPG2-203ENST00000374695 ATP2B2Q01814 1243 aa9.69□□□□□ -0.86
HSPG2-203ENST00000374695 LARP1Q6PKG0 1096 aaKnown RBP9.69□□□□□ -0.86
HSPG2-203ENST00000374695 NUP88Q99567 741 aaPredicted RBP9.69□□□□□ -0.86
HSPG2-203ENST00000374695 MNAT1P51948 309 aa9.69□□□□□ -0.86
HSPG2-203ENST00000374695 TTC12Q9H892 705 aaPredicted RBP9.69□□□□□ -0.86
HSPG2-203ENST00000374695 EFCAB5A4FU69 1503 aa9.69□□□□□ -0.86
HSPG2-203ENST00000374695 SSBP05455 408 aaKnown RBP eCLIP9.68□□□□□ -0.864e-6■■■■□ 24.3
HSPG2-203ENST00000374695 TTC14Q96N46 770 aa9.68□□□□□ -0.86
HSPG2-203ENST00000374695 SH3BGRP55822 239 aaPredicted RBP9.68□□□□□ -0.86
HSPG2-203ENST00000374695 SYCE3A1L190 88 aa9.68□□□□□ -0.86
HSPG2-203ENST00000374695 CCDC172P0C7W6 258 aa9.68□□□□□ -0.86
HSPG2-203ENST00000374695 STXBP4Q6ZWJ1 553 aa9.68□□□□□ -0.86
HSPG2-203ENST00000374695 PDZRN3Q9UPQ7 1066 aa9.68□□□□□ -0.86
HSPG2-203ENST00000374695 EHMT1Q9H9B1 1298 aa9.68□□□□□ -0.86
HSPG2-203ENST00000374695 FGD6Q6ZV73 1430 aa9.68□□□□□ -0.86
HSPG2-203ENST00000374695 MPHOSPH8Q99549 860 aa9.68□□□□□ -0.86
HSPG2-203ENST00000374695 RASAL2Q9UJF2 1139 aa9.68□□□□□ -0.86
HSPG2-203ENST00000374695 CTNNA2P26232 953 aa9.67□□□□□ -0.86
HSPG2-203ENST00000374695 CTNNBL1Q8WYA6 563 aaPredicted RBP9.67□□□□□ -0.86
HSPG2-203ENST00000374695 BCCIPQ9P287 314 aaKnown RBP eCLIP9.67□□□□□ -0.86
HSPG2-203ENST00000374695 ACTN2P35609 894 aa9.67□□□□□ -0.86
HSPG2-203ENST00000374695 DAPK1P53355 1430 aa9.67□□□□□ -0.86
HSPG2-203ENST00000374695 NUP133Q8WUM0 1156 aa9.67□□□□□ -0.86
HSPG2-203ENST00000374695 NAP1L3Q99457 506 aaPredicted RBP9.67□□□□□ -0.86
HSPG2-203ENST00000374695 HMOX1P09601 288 aa9.67□□□□□ -0.86
HSPG2-203ENST00000374695 HSF2BPO75031 334 aa9.67□□□□□ -0.86
HSPG2-203ENST00000374695 BMS1Q14692 1282 aaKnown RBP9.67□□□□□ -0.86
HSPG2-203ENST00000374695 CASTP20810 708 aaKnown RBP9.67□□□□□ -0.86
HSPG2-203ENST00000374695 PRPHP41219 470 aa9.67□□□□□ -0.86
HSPG2-203ENST00000374695 CCDC171Q6TFL3 1326 aa9.67□□□□□ -0.86
HSPG2-203ENST00000374695 CCDC155Q8N6L0 562 aa9.67□□□□□ -0.86
HSPG2-203ENST00000374695 SPECC1Q5M775 1068 aa9.67□□□□□ -0.86
HSPG2-203ENST00000374695 MSL1Q68DK7 614 aa9.67□□□□□ -0.86
HSPG2-203ENST00000374695 FBF1Q8TES7 1133 aa9.67□□□□□ -0.86
HSPG2-203ENST00000374695 MVPQ14764 893 aaKnown RBP9.67□□□□□ -0.86
HSPG2-203ENST00000374695 TWISTNBQ3B726 338 aaPredicted RBP9.67□□□□□ -0.86
HSPG2-203ENST00000374695 NOB1Q9ULX3 412 aaKnown RBP9.67□□□□□ -0.86
HSPG2-203ENST00000374695 DHX29Q7Z478 1369 aaKnown RBP9.67□□□□□ -0.86
HSPG2-203ENST00000374695 GPATCH11Q8N954 259 aa9.66□□□□□ -0.86
HSPG2-203ENST00000374695 DNAAF4Q8WXU2 420 aa9.66□□□□□ -0.86
HSPG2-203ENST00000374695 LIG1P18858 919 aa9.66□□□□□ -0.86
HSPG2-203ENST00000374695 PPP1R14CQ8TAE6 165 aa9.66□□□□□ -0.86
HSPG2-203ENST00000374695 JAKMIP1Q96N16 626 aaKnown RBP9.66□□□□□ -0.86
HSPG2-203ENST00000374695 COMMD10Q9Y6G5 202 aa9.66□□□□□ -0.86
HSPG2-203ENST00000374695 A0A087WZG4 1122 aa9.66□□□□□ -0.86
HSPG2-203ENST00000374695 STK3Q13188 491 aa9.66□□□□□ -0.86
HSPG2-203ENST00000374695 KANK3Q6NY19 840 aa9.66□□□□□ -0.86
HSPG2-203ENST00000374695 SSX2IPQ9Y2D8 614 aa9.66□□□□□ -0.86
HSPG2-203ENST00000374695 CHD1LQ86WJ1 897 aa9.66□□□□□ -0.86
HSPG2-203ENST00000374695 SWAP70Q9UH65 585 aa9.66□□□□□ -0.86
HSPG2-203ENST00000374695 ANAPC4Q9UJX5 808 aa9.66□□□□□ -0.86
HSPG2-203ENST00000374695 KRT222Q8N1A0 295 aa9.66□□□□□ -0.86
HSPG2-203ENST00000374695 LRRC27Q9C0I9 530 aa9.66□□□□□ -0.86
HSPG2-203ENST00000374695 HLTFQ14527 1009 aaKnown RBP eCLIP9.65□□□□□ -0.86
HSPG2-203ENST00000374695 FAM135AQ9P2D6 1515 aa9.65□□□□□ -0.86
HSPG2-203ENST00000374695 CLIP2Q9UDT6 1046 aa9.65□□□□□ -0.86
HSPG2-203ENST00000374695 RAB3IL1Q8TBN0 382 aa9.65□□□□□ -0.86
HSPG2-203ENST00000374695 HDGFL1Q5TGJ6 251 aa9.65□□□□□ -0.86
HSPG2-203ENST00000374695 AACSQ86V21 672 aa9.65□□□□□ -0.86
HSPG2-203ENST00000374695 PIBF1Q8WXW3 757 aa9.65□□□□□ -0.86
HSPG2-203ENST00000374695 RBM25P49756 843 aaKnown RBP9.65□□□□□ -0.86
HSPG2-203ENST00000374695 FERMT2Q96AC1 680 aa9.65□□□□□ -0.86
HSPG2-203ENST00000374695 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.65□□□□□ -0.87
HSPG2-203ENST00000374695 RAB11FIP3O75154 756 aa9.65□□□□□ -0.87
HSPG2-203ENST00000374695 CCDC6Q16204 474 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms