RNA–Protein interactions for RNA: ENST00000373895.7

TFAM-201, Transcript of transcription factor A, mitochondrial, humanhuman

TSL 2 BASIC

Gene TFAM, Length 973 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAM-201ENST00000373895 COL23A1Q86Y22 540 aaPredicted RBP16.89■□□□□ 0.29
TFAM-201ENST00000373895 NKX1-1Q15270 411 aaPredicted RBP16.88■□□□□ 0.29
TFAM-201ENST00000373895 PIGBQ92521 554 aa16.88■□□□□ 0.29
TFAM-201ENST00000373895 MAP3K5Q99683 1374 aa16.87■□□□□ 0.29
TFAM-201ENST00000373895 SMARCC1Q92922 1105 aaPredicted RBP16.86■□□□□ 0.29
TFAM-201ENST00000373895 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.86■□□□□ 0.293e-6■■■■□ 20
TFAM-201ENST00000373895 PHKG2P15735 406 aa16.85■□□□□ 0.29
TFAM-201ENST00000373895 MSL1Q68DK7 614 aa16.85■□□□□ 0.29
TFAM-201ENST00000373895 IFNL2Q8IZJ0 200 aa16.85■□□□□ 0.29
TFAM-201ENST00000373895 SP7Q8TDD2 431 aaPredicted RBP16.85■□□□□ 0.29
TFAM-201ENST00000373895 MORC1Q86VD1 984 aa16.84■□□□□ 0.29
TFAM-201ENST00000373895 C4BP0C0L5 1744 aa16.84■□□□□ 0.29
TFAM-201ENST00000373895 CHD4Q14839 1912 aa16.84■□□□□ 0.29
TFAM-201ENST00000373895 GPR162Q16538 588 aa16.83■□□□□ 0.28
TFAM-201ENST00000373895 SMIM5Q71RC9 77 aa16.83■□□□□ 0.28
TFAM-201ENST00000373895 SPDYE1Q8NFV5 336 aaPredicted RBP16.83■□□□□ 0.28
TFAM-201ENST00000373895 NLGN2Q8NFZ4 835 aa16.83■□□□□ 0.28
TFAM-201ENST00000373895 TMOD3Q9NYL9 352 aa16.83■□□□□ 0.28
TFAM-201ENST00000373895 CLEC11AQ9Y240 323 aa16.83■□□□□ 0.28
TFAM-201ENST00000373895 IGSF1Q8N6C5 1336 aa16.82■□□□□ 0.28
TFAM-201ENST00000373895 HAX1O00165 279 aa16.82■□□□□ 0.28
TFAM-201ENST00000373895 PELP1Q8IZL8 1130 aaKnown RBP16.82■□□□□ 0.28
TFAM-201ENST00000373895 ASAP1Q9ULH1 1129 aa16.82■□□□□ 0.28
TFAM-201ENST00000373895 AMIGO3Q86WK7 504 aa16.81■□□□□ 0.28
TFAM-201ENST00000373895 AK7Q96M32 723 aa16.81■□□□□ 0.28
TFAM-201ENST00000373895 KNSTRNQ9Y448 316 aa16.81■□□□□ 0.28
TFAM-201ENST00000373895 UBR3Q6ZT12 1888 aa16.8■□□□□ 0.28
TFAM-201ENST00000373895 LOC102724428A0A0B4J2F2 783 aa16.8■□□□□ 0.28
TFAM-201ENST00000373895 PHF14O94880 888 aa16.8■□□□□ 0.28
TFAM-201ENST00000373895 HMGB2P26583 209 aaKnown RBP16.8■□□□□ 0.28
TFAM-201ENST00000373895 SIK1P57059 783 aa16.8■□□□□ 0.28
TFAM-201ENST00000373895 LINC00116Q8NCU8 138 aa16.8■□□□□ 0.28
TFAM-201ENST00000373895 FLAD1Q8NFF5 587 aa16.8■□□□□ 0.28
TFAM-201ENST00000373895 ATG3Q9NT62 314 aa16.79■□□□□ 0.28
TFAM-201ENST00000373895 ATP6V1AP38606 617 aa16.78■□□□□ 0.28
TFAM-201ENST00000373895 ITPK1Q13572 414 aa16.78■□□□□ 0.28
TFAM-201ENST00000373895 PLEKHO1Q53GL0 409 aaPredicted RBP16.78■□□□□ 0.28
TFAM-201ENST00000373895 AEBP1Q8IUX7 1158 aa16.78■□□□□ 0.28
TFAM-201ENST00000373895 ZNF784Q8NCA9 323 aaPredicted RBP16.78■□□□□ 0.28
TFAM-201ENST00000373895 UTRNP46939 3433 aa16.78■□□□□ 0.28
TFAM-201ENST00000373895 KIF7Q2M1P5 1343 aa16.77■□□□□ 0.28
TFAM-201ENST00000373895 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.77■□□□□ 0.28
TFAM-201ENST00000373895 ZNF530Q6P9A1 599 aaPredicted RBP16.77■□□□□ 0.28
TFAM-201ENST00000373895 SSUH2Q9Y2M2 353 aa16.77■□□□□ 0.28
TFAM-201ENST00000373895 ERVV-2B6SEH9 535 aa16.75■□□□□ 0.27
TFAM-201ENST00000373895 AMER1Q5JTC6 1135 aaPredicted RBP16.75■□□□□ 0.27
TFAM-201ENST00000373895 SULT6B1Q6IMI4 303 aa16.75■□□□□ 0.27
TFAM-201ENST00000373895 DCAF5Q96JK2 942 aa16.75■□□□□ 0.27
TFAM-201ENST00000373895 PLEKHG2Q9H7P9 1386 aa16.75■□□□□ 0.27
TFAM-201ENST00000373895 KDM6AO15550 1401 aaPredicted RBP16.74■□□□□ 0.27
TFAM-201ENST00000373895 GNPATO15228 680 aa16.74■□□□□ 0.27
TFAM-201ENST00000373895 HSP90AB1P08238 724 aaKnown RBP16.74■□□□□ 0.27
TFAM-201ENST00000373895 YBX3P16989 372 aaKnown RBP eCLIP16.74■□□□□ 0.272e-18■□□□□ 10.1
TFAM-201ENST00000373895 SSFA2P28290 1259 aa16.74■□□□□ 0.27
TFAM-201ENST00000373895 AMOTQ4VCS5 1084 aa16.74■□□□□ 0.27
TFAM-201ENST00000373895 IL13P35225 146 aa16.73■□□□□ 0.27
TFAM-201ENST00000373895 SLC4A9Q96Q91 983 aa16.73■□□□□ 0.27
TFAM-201ENST00000373895 MTHFSP49914 203 aa16.72■□□□□ 0.27
TFAM-201ENST00000373895 CABP4P57796 275 aa16.72■□□□□ 0.27
TFAM-201ENST00000373895 CD2APQ9Y5K6 639 aa16.72■□□□□ 0.27
TFAM-201ENST00000373895 C1orf141Q5JVX7 400 aa16.71■□□□□ 0.27
TFAM-201ENST00000373895 KDRP35968 1356 aa16.71■□□□□ 0.27
TFAM-201ENST00000373895 GOLGB1Q14789 3259 aaKnown RBP16.7■□□□□ 0.26
TFAM-201ENST00000373895 PER1O15534 1290 aaPredicted RBP16.7■□□□□ 0.26
TFAM-201ENST00000373895 CC2D1BQ5T0F9 858 aaKnown RBP16.7■□□□□ 0.26
TFAM-201ENST00000373895 CNGB1Q14028 1251 aaPredicted RBP16.69■□□□□ 0.26
TFAM-201ENST00000373895 NFATC2IPQ8NCF5 419 aa16.69■□□□□ 0.26
TFAM-201ENST00000373895 ZNF831Q5JPB2 1677 aa16.69■□□□□ 0.26
TFAM-201ENST00000373895 COL5A3P25940 1745 aaPredicted RBP16.68■□□□□ 0.26
TFAM-201ENST00000373895 GRIN3BO60391 1043 aa16.68■□□□□ 0.26
TFAM-201ENST00000373895 PTCD1O75127 700 aaKnown RBP16.68■□□□□ 0.26
TFAM-201ENST00000373895 WWC3Q9ULE0 1092 aa16.68■□□□□ 0.26
TFAM-201ENST00000373895 RTCBQ9Y3I0 505 aaKnown RBP16.68■□□□□ 0.26
TFAM-201ENST00000373895 SCN11AQ9UI33 1791 aa16.67■□□□□ 0.26
TFAM-201ENST00000373895 HMOX1P09601 288 aa16.67■□□□□ 0.26
TFAM-201ENST00000373895 TRAPPC3LQ5T215 181 aa16.67■□□□□ 0.26
TFAM-201ENST00000373895 MYH14Q7Z406 1995 aaKnown RBP16.66■□□□□ 0.26
TFAM-201ENST00000373895 PRKAR2AP13861 404 aaKnown RBP16.66■□□□□ 0.26
TFAM-201ENST00000373895 MMP10P09238 476 aa16.65■□□□□ 0.26
TFAM-201ENST00000373895 RC3H1Q5TC82 1133 aaKnown RBP16.65■□□□□ 0.26
TFAM-201ENST00000373895 ARHGEF1Q92888 912 aaKnown RBP16.65■□□□□ 0.26
TFAM-201ENST00000373895 LGR6Q9HBX8 967 aa16.65■□□□□ 0.26
TFAM-201ENST00000373895 VIRMAQ69YN4 1812 aaKnown RBP16.65■□□□□ 0.26
TFAM-201ENST00000373895 CNTNAP4Q9C0A0 1308 aa16.65■□□□□ 0.26
TFAM-201ENST00000373895 AKAP4Q5JQC9 854 aa16.64■□□□□ 0.25
TFAM-201ENST00000373895 DIAPH1O60610 1272 aaKnown RBP16.63■□□□□ 0.25
TFAM-201ENST00000373895 RPS6KA4O75676 772 aa16.63■□□□□ 0.25
TFAM-201ENST00000373895 TJP1Q07157 1748 aa16.62■□□□□ 0.25
TFAM-201ENST00000373895 RFC4P35249 363 aa16.62■□□□□ 0.25
TFAM-201ENST00000373895 C4AP0C0L4 1744 aa16.62■□□□□ 0.25
TFAM-201ENST00000373895 CICQ96RK0 1608 aaPredicted RBP16.61■□□□□ 0.25
TFAM-201ENST00000373895 RNMTO43148 476 aaKnown RBP16.61■□□□□ 0.25
TFAM-201ENST00000373895 GYS1P13807 737 aa16.61■□□□□ 0.25
TFAM-201ENST00000373895 CRKLP46109 303 aaKnown RBP16.61■□□□□ 0.25
TFAM-201ENST00000373895 MTHFSDQ2M296 383 aaKnown RBP16.61■□□□□ 0.25
TFAM-201ENST00000373895 NLGN1Q8N2Q7 840 aa16.61■□□□□ 0.25
TFAM-201ENST00000373895 N4BP2Q86UW6 1770 aaPredicted RBP16.6■□□□□ 0.25
TFAM-201ENST00000373895 C1QTNF8P60827 252 aa16.6■□□□□ 0.25
TFAM-201ENST00000373895 SLC39A6Q13433 755 aa16.6■□□□□ 0.25
TFAM-201ENST00000373895 SLC52A2Q9HAB3 445 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms