RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 CEP350Q5VT06 3117 aa18.01■□□□□ 0.47
TRAPPC3-201ENST00000373159 UBR3Q6ZT12 1888 aa18.01■□□□□ 0.47
TRAPPC3-201ENST00000373159 ANKRD26Q9UPS8 1709 aa18.01■□□□□ 0.47
TRAPPC3-201ENST00000373159 HSP90AB1P08238 724 aaKnown RBP18.01■□□□□ 0.47
TRAPPC3-201ENST00000373159 TRAPPC3LQ5T215 181 aa18.01■□□□□ 0.47
TRAPPC3-201ENST00000373159 DCAF5Q96JK2 942 aa18.01■□□□□ 0.47
TRAPPC3-201ENST00000373159 POLR3GLQ9BT43 218 aa18.01■□□□□ 0.47
TRAPPC3-201ENST00000373159 MMP10P09238 476 aa18■□□□□ 0.47
TRAPPC3-201ENST00000373159 PLEKHO1Q53GL0 409 aaPredicted RBP18■□□□□ 0.47
TRAPPC3-201ENST00000373159 RC3H1Q5TC82 1133 aaKnown RBP18■□□□□ 0.47
TRAPPC3-201ENST00000373159 NLGN1Q8N2Q7 840 aa18■□□□□ 0.47
TRAPPC3-201ENST00000373159 SLC4A9Q96Q91 983 aa18■□□□□ 0.47
TRAPPC3-201ENST00000373159 RTCBQ9Y3I0 505 aaKnown RBP18■□□□□ 0.47
TRAPPC3-201ENST00000373159 PANK3Q9H999 370 aa17.99■□□□□ 0.47
TRAPPC3-201ENST00000373159 WWC3Q9ULE0 1092 aa17.99■□□□□ 0.47
TRAPPC3-201ENST00000373159 ADRA2BP18089 450 aa17.98■□□□□ 0.47
TRAPPC3-201ENST00000373159 TGFB2P61812 414 aa17.98■□□□□ 0.47
TRAPPC3-201ENST00000373159 AMOTQ4VCS5 1084 aa17.98■□□□□ 0.47
TRAPPC3-201ENST00000373159 ARHGEF1Q92888 912 aaKnown RBP17.98■□□□□ 0.47
TRAPPC3-201ENST00000373159 RBM42Q9BTD8 480 aaKnown RBP17.98■□□□□ 0.47
TRAPPC3-201ENST00000373159 KDRP35968 1356 aa17.98■□□□□ 0.47
TRAPPC3-201ENST00000373159 EIF4G2P78344 907 aaKnown RBP eCLIP17.97■□□□□ 0.47
TRAPPC3-201ENST00000373159 RPS6KA4O75676 772 aa17.96■□□□□ 0.47
TRAPPC3-201ENST00000373159 ZNF526Q8TF50 670 aaPredicted RBP17.96■□□□□ 0.47
TRAPPC3-201ENST00000373159 CNTNAP4Q9C0A0 1308 aa17.96■□□□□ 0.46
TRAPPC3-201ENST00000373159 CABP4P57796 275 aa17.95■□□□□ 0.46
TRAPPC3-201ENST00000373159 ZNF530Q6P9A1 599 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC3-201ENST00000373159 HSPA5P11021 654 aaKnown RBP17.94■□□□□ 0.46
TRAPPC3-201ENST00000373159 GYS1P13807 737 aa17.94■□□□□ 0.46
TRAPPC3-201ENST00000373159 HSPA6P17066 643 aa17.94■□□□□ 0.46
TRAPPC3-201ENST00000373159 RFC4P35249 363 aa17.94■□□□□ 0.46
TRAPPC3-201ENST00000373159 MTHFSP49914 203 aa17.94■□□□□ 0.46
TRAPPC3-201ENST00000373159 A0A0G2JLW4 131 aa17.93■□□□□ 0.46
TRAPPC3-201ENST00000373159 MORC1Q86VD1 984 aa17.93■□□□□ 0.46
TRAPPC3-201ENST00000373159 PCGF6Q9BYE7 350 aa17.93■□□□□ 0.46
TRAPPC3-201ENST00000373159 CCDC87Q9NVE4 849 aa17.92■□□□□ 0.46
TRAPPC3-201ENST00000373159 PXDNLA1KZ92 1463 aa17.92■□□□□ 0.46
TRAPPC3-201ENST00000373159 KDM6AO15550 1401 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC3-201ENST00000373159 KIF3CO14782 793 aa17.91■□□□□ 0.46
TRAPPC3-201ENST00000373159 C1orf141Q5JVX7 400 aa17.91■□□□□ 0.46
TRAPPC3-201ENST00000373159 AEBP1Q8IUX7 1158 aa17.91■□□□□ 0.46
TRAPPC3-201ENST00000373159 NFATC2IPQ8NCF5 419 aa17.91■□□□□ 0.46
TRAPPC3-201ENST00000373159 BCS1LQ9Y276 419 aa17.91■□□□□ 0.46
TRAPPC3-201ENST00000373159 PARP3Q9Y6F1 533 aa17.91■□□□□ 0.46
TRAPPC3-201ENST00000373159 PTCD1O75127 700 aaKnown RBP17.9■□□□□ 0.46
TRAPPC3-201ENST00000373159 DPEP1P16444 411 aa17.9■□□□□ 0.46
TRAPPC3-201ENST00000373159 SULT6B1Q6IMI4 303 aa17.9■□□□□ 0.46
TRAPPC3-201ENST00000373159 C10orf71Q711Q0 1435 aa17.89■□□□□ 0.46
TRAPPC3-201ENST00000373159 ZNF831Q5JPB2 1677 aa17.89■□□□□ 0.45
TRAPPC3-201ENST00000373159 IL13P35225 146 aa17.88■□□□□ 0.45
TRAPPC3-201ENST00000373159 CRKLP46109 303 aaKnown RBP17.88■□□□□ 0.45
TRAPPC3-201ENST00000373159 IFFO2Q5TF58 517 aa17.88■□□□□ 0.45
TRAPPC3-201ENST00000373159 ARHGAP27Q6ZUM4 889 aa17.88■□□□□ 0.45
TRAPPC3-201ENST00000373159 FCHSD2O94868 740 aa17.87■□□□□ 0.45
TRAPPC3-201ENST00000373159 KCNA3P22001 575 aa17.87■□□□□ 0.45
TRAPPC3-201ENST00000373159 KNSTRNQ9Y448 316 aa17.87■□□□□ 0.45
TRAPPC3-201ENST00000373159 CICQ96RK0 1608 aaPredicted RBP17.87■□□□□ 0.45
TRAPPC3-201ENST00000373159 KIF13BQ9NQT8 1826 aa17.86■□□□□ 0.45
TRAPPC3-201ENST00000373159 PIM2Q9P1W9 311 aa17.85■□□□□ 0.45
TRAPPC3-201ENST00000373159 USP42Q9H9J4 1324 aaKnown RBP17.84■□□□□ 0.45
TRAPPC3-201ENST00000373159 TOMM70O94826 608 aa17.84■□□□□ 0.45
TRAPPC3-201ENST00000373159 FKBP8Q14318 412 aa17.84■□□□□ 0.45
TRAPPC3-201ENST00000373159 AKAP4Q5JQC9 854 aa17.84■□□□□ 0.45
TRAPPC3-201ENST00000373159 INTS5Q6P9B9 1019 aaKnown RBP17.84■□□□□ 0.45
TRAPPC3-201ENST00000373159 SRP68Q9UHB9 627 aaKnown RBP17.84■□□□□ 0.45
TRAPPC3-201ENST00000373159 MYH14Q7Z406 1995 aaKnown RBP17.84■□□□□ 0.45
TRAPPC3-201ENST00000373159 AMER1Q5JTC6 1135 aaPredicted RBP17.83■□□□□ 0.44
TRAPPC3-201ENST00000373159 COL5A3P25940 1745 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC3-201ENST00000373159 TM4SF1P30408 202 aa17.82■□□□□ 0.44
TRAPPC3-201ENST00000373159 DDR1Q08345 913 aa17.82■□□□□ 0.44
TRAPPC3-201ENST00000373159 SLC52A2Q9HAB3 445 aa17.82■□□□□ 0.44
TRAPPC3-201ENST00000373159 C4AP0C0L4 1744 aa17.81■□□□□ 0.44
TRAPPC3-201ENST00000373159 KIAA1551Q9HCM1 1747 aa17.81■□□□□ 0.44
TRAPPC3-201ENST00000373159 DALRD3Q5D0E6 543 aaKnown RBP17.81■□□□□ 0.44
TRAPPC3-201ENST00000373159 LGR6Q9HBX8 967 aa17.81■□□□□ 0.44
TRAPPC3-201ENST00000373159 POLRMTO00411 1230 aaKnown RBP17.8■□□□□ 0.44
TRAPPC3-201ENST00000373159 APLP1P51693 650 aa17.8■□□□□ 0.44
TRAPPC3-201ENST00000373159 C9orf131Q5VYM1 1079 aa17.8■□□□□ 0.44
TRAPPC3-201ENST00000373159 DNAJC10Q8IXB1 793 aa17.8■□□□□ 0.44
TRAPPC3-201ENST00000373159 N4BP2Q86UW6 1770 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC3-201ENST00000373159 ZPR1O75312 459 aa17.79■□□□□ 0.44
TRAPPC3-201ENST00000373159 NMRK2Q9NPI5 230 aa17.79■□□□□ 0.44
TRAPPC3-201ENST00000373159 RNMTO43148 476 aaKnown RBP17.78■□□□□ 0.44
TRAPPC3-201ENST00000373159 CYP19A1P11511 503 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC3-201ENST00000373159 SOS1Q07889 1333 aaPredicted RBP17.77■□□□□ 0.44
TRAPPC3-201ENST00000373159 USPL1Q5W0Q7 1092 aa17.77■□□□□ 0.44
TRAPPC3-201ENST00000373159 HMOX1P09601 288 aa17.76■□□□□ 0.43
TRAPPC3-201ENST00000373159 CHRNA5P30532 468 aa17.76■□□□□ 0.43
TRAPPC3-201ENST00000373159 SLC39A6Q13433 755 aa17.76■□□□□ 0.43
TRAPPC3-201ENST00000373159 VSIG10Q8N0Z9 540 aa17.76■□□□□ 0.43
TRAPPC3-201ENST00000373159 DNAJC5GQ8N7S2 189 aa17.76■□□□□ 0.43
TRAPPC3-201ENST00000373159 RBM46Q8TBY0 533 aaKnown RBP17.76■□□□□ 0.43
TRAPPC3-201ENST00000373159 NARFQ9UHQ1 456 aa17.76■□□□□ 0.43
TRAPPC3-201ENST00000373159 PER1O15534 1290 aaPredicted RBP17.75■□□□□ 0.43
TRAPPC3-201ENST00000373159 MTHFSDQ2M296 383 aaKnown RBP17.75■□□□□ 0.43
TRAPPC3-201ENST00000373159 CCER1Q8TC90 406 aaPredicted RBP17.75■□□□□ 0.43
TRAPPC3-201ENST00000373159 DIAPH1O60610 1272 aaKnown RBP17.74■□□□□ 0.43
TRAPPC3-201ENST00000373159 NFIXQ14938 502 aa17.74■□□□□ 0.43
TRAPPC3-201ENST00000373159 KIF7Q2M1P5 1343 aa17.73■□□□□ 0.43
TRAPPC3-201ENST00000373159 RNF181Q9P0P0 153 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms