RNA–Protein interactions for RNA: ENST00000372285.7

CD40-202, Transcript of CD40 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD40, Length 1,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-202ENST00000372285 BTG4Q9NY30 223 aa22.99■■□□□ 1.27
CD40-202ENST00000372285 SHANK3Q9BYB0 1731 aa22.98■■□□□ 1.27
CD40-202ENST00000372285 ABCC4O15439 1325 aa22.98■■□□□ 1.27
CD40-202ENST00000372285 BTBD11A6QL63 1104 aa22.98■■□□□ 1.27
CD40-202ENST00000372285 CYP27B1O15528 508 aa22.98■■□□□ 1.27
CD40-202ENST00000372285 EIF4A1P60842 406 aaKnown RBP22.98■■□□□ 1.27
CD40-202ENST00000372285 PLCH1Q4KWH8 1693 aa22.98■■□□□ 1.27
CD40-202ENST00000372285 MRC1P22897 1456 aa22.98■■□□□ 1.27
CD40-202ENST00000372285 CENPQQ7L2Z9 268 aaPredicted RBP22.97■■□□□ 1.27
CD40-202ENST00000372285 HSP90AB1P08238 724 aaKnown RBP22.96■■□□□ 1.27
CD40-202ENST00000372285 IL2RBP14784 551 aa22.96■■□□□ 1.27
CD40-202ENST00000372285 HOXB7P09629 217 aa22.96■■□□□ 1.27
CD40-202ENST00000372285 ITPRIPQ8IWB1 547 aa22.96■■□□□ 1.27
CD40-202ENST00000372285 ZCRB1Q8TBF4 217 aaKnown RBP22.96■■□□□ 1.27
CD40-202ENST00000372285 DCAF5Q96JK2 942 aa22.96■■□□□ 1.27
CD40-202ENST00000372285 PTPRCP08575 1304 aa22.95■■□□□ 1.26
CD40-202ENST00000372285 CCDC30Q5VVM6 783 aa22.95■■□□□ 1.26
CD40-202ENST00000372285 SLC4A2P04920 1241 aa22.94■■□□□ 1.26
CD40-202ENST00000372285 SLC52A2Q9HAB3 445 aa22.94■■□□□ 1.26
CD40-202ENST00000372285 PCDH11XQ9BZA7 1347 aa22.94■■□□□ 1.26
CD40-202ENST00000372285 PCDH11YQ9BZA8 1340 aa22.94■■□□□ 1.26
CD40-202ENST00000372285 RGS12O14924 1447 aa22.93■■□□□ 1.26
CD40-202ENST00000372285 NRAPQ86VF7 1730 aa22.93■■□□□ 1.26
CD40-202ENST00000372285 KCNQ3O43525 872 aa22.93■■□□□ 1.26
CD40-202ENST00000372285 STK31Q9BXU1 1019 aa22.93■■□□□ 1.26
CD40-202ENST00000372285 CHMP4AQ9BY43 222 aa22.93■■□□□ 1.26
CD40-202ENST00000372285 HEG1Q9ULI3 1381 aa22.93■■□□□ 1.26
CD40-202ENST00000372285 WNK3Q9BYP7 1800 aa22.92■■□□□ 1.26
CD40-202ENST00000372285 PCDHB15Q9Y5E8 787 aa22.91■■□□□ 1.26
CD40-202ENST00000372285 NWD2Q9ULI1 1742 aa22.91■■□□□ 1.26
CD40-202ENST00000372285 CHMP4BQ9H444 224 aaKnown RBP22.91■■□□□ 1.26
CD40-202ENST00000372285 ZBTB40Q9NUA8 1239 aa22.91■■□□□ 1.26
CD40-202ENST00000372285 NKX1-1Q15270 411 aaPredicted RBP22.89■■□□□ 1.26
CD40-202ENST00000372285 DISP2A7MBM2 1401 aa22.89■■□□□ 1.25
CD40-202ENST00000372285 IGHDP01880 384 aa22.88■■□□□ 1.25
CD40-202ENST00000372285 HDGFL1Q5TGJ6 251 aa22.88■■□□□ 1.25
CD40-202ENST00000372285 INTS3Q68E01 1043 aaKnown RBP22.88■■□□□ 1.25
CD40-202ENST00000372285 CERKQ8TCT0 537 aa22.88■■□□□ 1.25
CD40-202ENST00000372285 ZBTB7BO15156 539 aaPredicted RBP22.88■■□□□ 1.25
CD40-202ENST00000372285 G2E3Q7L622 706 aa22.88■■□□□ 1.25
CD40-202ENST00000372285 NFATC2IPQ8NCF5 419 aa22.88■■□□□ 1.25
CD40-202ENST00000372285 TSHZ2Q9NRE2 1034 aa22.87■■□□□ 1.25
CD40-202ENST00000372285 N4BP2Q86UW6 1770 aaPredicted RBP22.86■■□□□ 1.25
CD40-202ENST00000372285 ADAMTS2O95450 1211 aa22.86■■□□□ 1.25
CD40-202ENST00000372285 GIGYF1O75420 1035 aaPredicted RBP22.85■■□□□ 1.25
CD40-202ENST00000372285 ZNF790Q6PG37 636 aa22.85■■□□□ 1.25
CD40-202ENST00000372285 ERVV-2B6SEH9 535 aa22.85■■□□□ 1.25
CD40-202ENST00000372285 NECTIN2Q92692 538 aa22.85■■□□□ 1.25
CD40-202ENST00000372285 RWDD1Q9H446 243 aaPredicted RBP22.85■■□□□ 1.25
CD40-202ENST00000372285 USP35Q9P2H5 1018 aa22.85■■□□□ 1.25
CD40-202ENST00000372285 JCADQ9P266 1359 aa22.84■■□□□ 1.25
CD40-202ENST00000372285 CABP4P57796 275 aa22.84■■□□□ 1.25
CD40-202ENST00000372285 FLIIQ13045 1269 aa22.84■■□□□ 1.25
CD40-202ENST00000372285 C5P01031 1676 aa22.84■■□□□ 1.25
CD40-202ENST00000372285 NUTM2BA6NNL0 878 aaPredicted RBP22.83■■□□□ 1.25
CD40-202ENST00000372285 NUTM2EB1AL46 878 aaPredicted RBP22.83■■□□□ 1.25
CD40-202ENST00000372285 NUTM2AQ8IVF1 878 aaPredicted RBP22.83■■□□□ 1.25
CD40-202ENST00000372285 SLIT2O94813 1529 aa22.83■■□□□ 1.24
CD40-202ENST00000372285 PAPPAQ13219 1627 aa22.82■■□□□ 1.24
CD40-202ENST00000372285 TOGARAM1Q9Y4F4 1720 aa22.82■■□□□ 1.24
CD40-202ENST00000372285 EIF2S2P20042 333 aaKnown RBP22.82■■□□□ 1.24
CD40-202ENST00000372285 SLC39A6Q13433 755 aa22.82■■□□□ 1.24
CD40-202ENST00000372285 HDAC1Q13547 482 aaPredicted RBP22.82■■□□□ 1.24
CD40-202ENST00000372285 DDX54Q8TDD1 881 aaKnown RBP22.81■■□□□ 1.24
CD40-202ENST00000372285 UBR2Q8IWV8 1755 aa22.81■■□□□ 1.24
CD40-202ENST00000372285 PXDNLA1KZ92 1463 aa22.79■■□□□ 1.24
CD40-202ENST00000372285 SPATA31A1Q5TZJ5 1347 aa22.79■■□□□ 1.24
CD40-202ENST00000372285 CCT4P50991 539 aaKnown RBP22.79■■□□□ 1.24
CD40-202ENST00000372285 FKBP5Q13451 457 aaPredicted RBP22.79■■□□□ 1.24
CD40-202ENST00000372285 CHPF2Q9P2E5 772 aa22.79■■□□□ 1.24
CD40-202ENST00000372285 THRAP3Q9Y2W1 955 aaKnown RBP22.79■■□□□ 1.24
CD40-202ENST00000372285 TTC5Q8N0Z6 440 aa22.78■■□□□ 1.24
CD40-202ENST00000372285 CDCA7Q9BWT1 371 aaPredicted RBP22.78■■□□□ 1.24
CD40-202ENST00000372285 DBF4Q9UBU7 674 aaPredicted RBP22.78■■□□□ 1.24
CD40-202ENST00000372285 GLI3P10071 1580 aa22.78■■□□□ 1.24
CD40-202ENST00000372285 F6X3S4 739 aa22.77■■□□□ 1.24
CD40-202ENST00000372285 ZNF496Q96IT1 587 aaPredicted RBP22.77■■□□□ 1.24
CD40-202ENST00000372285 LAMB4A4D0S4 1761 aa22.77■■□□□ 1.24
CD40-202ENST00000372285 LRP6O75581 1613 aa22.77■■□□□ 1.24
CD40-202ENST00000372285 ITGB4P16144 1822 aa22.77■■□□□ 1.24
CD40-202ENST00000372285 FMNL2Q96PY5 1086 aa22.77■■□□□ 1.23
CD40-202ENST00000372285 PHAXQ9H814 394 aaKnown RBP22.77■■□□□ 1.23
CD40-202ENST00000372285 PRAMEF22A3QJZ6 481 aa22.76■■□□□ 1.23
CD40-202ENST00000372285 SPATA31A5Q5VU36 1347 aa22.75■■□□□ 1.23
CD40-202ENST00000372285 SPATA31A7Q8IWB4 1347 aa22.75■■□□□ 1.23
CD40-202ENST00000372285 TNS2Q63HR2 1409 aa22.75■■□□□ 1.23
CD40-202ENST00000372285 SPATA31A6Q5VVP1 1343 aa22.74■■□□□ 1.23
CD40-202ENST00000372285 EXOC5O00471 708 aa22.74■■□□□ 1.23
CD40-202ENST00000372285 SNRPA1P09661 255 aaKnown RBP22.74■■□□□ 1.23
CD40-202ENST00000372285 SLC4A10Q6U841 1118 aa22.74■■□□□ 1.23
CD40-202ENST00000372285 KCPQ6ZWJ8 1503 aa22.73■■□□□ 1.23
CD40-202ENST00000372285 SKAP1Q86WV1 359 aa22.73■■□□□ 1.23
CD40-202ENST00000372285 DDX21Q9NR30 783 aaKnown RBP eCLIP22.73■■□□□ 1.23
CD40-202ENST00000372285 HYPKQ9NX55 129 aa22.73■■□□□ 1.23
CD40-202ENST00000372285 UNC5CLQ8IV45 518 aa22.71■■□□□ 1.23
CD40-202ENST00000372285 PDIA6Q15084 440 aa22.71■■□□□ 1.23
CD40-202ENST00000372285 SMC5Q8IY18 1101 aa22.71■■□□□ 1.23
CD40-202ENST00000372285 C1orf115Q9H7X2 142 aa22.71■■□□□ 1.23
CD40-202ENST00000372285 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.7■■□□□ 1.22
CD40-202ENST00000372285 ANXA1P04083 346 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms